How genomics can help biodiversity conservation
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10451/58355 |
Resumo: | The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics. |
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How genomics can help biodiversity conservationThe availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics.CellPressRepositório da Universidade de LisboaTheissinger, KathrinFernandes, CFormenti, GiulioBista, IlianaBerg, Paul R.Bleidorn, ChristophBombarely, AurelianoCrottini, AngelicaGallo, Guido R.Godoy, José A.Jentoft, SisselMalukiewicz, JoannaMouton, AliceOomen, Rebekah A.Paez, SadyePalsbøll, Per J.Pampoulie, ChristopheRuiz-López, María J.Secomandi, SimonaSvardal, HannesTheofanopoulou, Constantinade Vries, JanWaldvogel, Ann-MarieZhang, GuojieJarvis, Erich D.Bálint, MiklósCiofi, ClaudioWaterhouse, Robert M.Mazzoni, Camila J.Höglund, JacobAghayan, Sargis A.Alioto, Tyler S.Almudi, IsabelAlvarez, NadirAlves, Paulo C.Amorim do Rosario, Isabel R.Antunes, AgostinhoArribas, PaulaBaldrian, PetrBertorelle, GiorgioBöhne, AstridBonisoli-Alquati, AndreaBoštjančić, Ljudevit L.Boussau, BastienBreton, Catherine M.Buzan, ElenaCampos, Paula F.Carreras, CarlosCastro, L. FIlipe C.Chueca, Luis J.Čiampor, FedorConti, ElenaCook-Deegan, RobertCroll, DanielCunha, Mónica V.Delsuc, FrédéricDennis, Alice B.Dimitrov, DimitarFaria, RuiFavre, AdrienFedrigo, Olivier D.Fernández, RosaFicetola, Gentile FrancescoFlot, Jean-FrançoisGabaldón, ToniAgius, Dolores R.Giani, Alice M.Gilbert, M. Thomas P.Grebenc, TineGuschanski, KaterinaGuyot, RomainHausdorf, BernhardHawlitschek, OliverHeintzman, Peter D.Heinze, BertholdHiller, MichaelHusemann, MartinIannucci, AlessioIrisarri, IkerJakobsen, Kjetill S.Klinga, PeterKloch, AgnieszkaKratochwil, Claudius F.Kusche, HenrikLayton, Kara K.S.Leonard, Jennifer A.Lerat, EmmanuelleLiti, GianniManousaki, TerezaMarques-Bonet, TomasMatos-Maraví, PávelMatschiner, MichaelMaumus, FlorianMc Cartney, Ann M.Meiri, ShaiMelo-Ferreira, JoséMengual, XimoMonaghan, Michael T.Montagna, MatteoMysłajek, Robert W.Neiber, Marco T.Nicolas, ViolaineNovo, MartaOzretić, PetarPalero, FerranPârvulescu, LucianPascual, MartaPaulo, Octávio S.Pavlek, MartinaPegueroles, CintaPellissier, LoïcPesole, GrazianoPrimmer, Craig R.Riesgo, AnaRüber, LukasRubolini, DiegoSalvi, DanieleSeehausen, OleSeidel, MatthiasStuder, BrunoTheodoridis, SpyrosThines, MarcoUrban, LaraVasemägi, AntiVella, AdrianaVella, NoelVernes, Sonja C.Vernesi, CristianoVieites, David R.Wheat, Christopher W.Wörheide, GertWurm, YannickZammit, Gabrielle2023-06-27T18:01:04Z2023-022023-02-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/58355engKathrin Theissinger, Carlos Fernandes, Giulio Formenti, Iliana Bista, Paul R. Berg, Christoph Bleidorn, Aureliano Bombarely, Angelica Crottini, Guido R. Gallo, José A. Godoy, Sissel Jentoft, Joanna Malukiewicz, Alice Mouton, Rebekah A. Oomen, Sadye Paez, Per J. Palsbøll, Christophe Pampoulie, María J. Ruiz-López, Simona Secomandi, Hannes Svardal, Constantina Theofanopoulou, Jan de Vries, Ann-Marie Waldvogel, Guojie Zhang, Erich D. Jarvis, Miklós Bálint, Claudio Ciofi, Robert M. Waterhouse, Camila J. Mazzoni, Jacob Höglund, Sargis A. Aghayan, Tyler S. Alioto, Isabel Almudi, Nadir Alvarez, Paulo C. Alves, Isabel R. Amorim do Rosario, Agostinho Antunes, Paula Arribas, Petr Baldrian, Giorgio Bertorelle, Astrid Böhne, Andrea Bonisoli-Alquati, Ljudevit L. Boštjančić, Bastien Boussau, Catherine M. Breton, Elena Buzan, Paula F. Campos, Carlos Carreras, L. FIlipe C. Castro, Luis J. Chueca, Fedor Čiampor, Elena Conti, Robert Cook-Deegan, Daniel Croll, Mónica V. Cunha, Frédéric Delsuc, Alice B. Dennis, Dimitar Dimitrov, Rui Faria, Adrien Favre, Olivier D. Fedrigo, Rosa Fernández, Gentile Francesco Ficetola, Jean-François Flot, Toni Gabaldón, Dolores R. Agius, Alice M. Giani, M. Thomas P. Gilbert, Tine Grebenc, Katerina Guschanski, Romain Guyot, Bernhard Hausdorf, Oliver Hawlitschek, Peter D. Heintzman, Berthold Heinze, Michael Hiller, Martin Husemann, Alessio Iannucci, Iker Irisarri, Kjetill S. Jakobsen, Peter Klinga, Agnieszka Kloch, Claudius F. Kratochwil, Henrik Kusche, Kara K.S. Layton, Jennifer A. Leonard, Emmanuelle Lerat, Gianni Liti, Tereza Manousaki, Tomas Marques-Bonet, Pável Matos-Maraví, Michael Matschiner, Florian Maumus, Ann M. Mc Cartney, Shai Meiri, José Melo-Ferreira, Ximo Mengual, Michael T. Monaghan, Matteo Montagna, Robert W. Mysłajek, Marco T. Neiber, Violaine Nicolas, Marta Novo, Petar Ozretić, Ferran Palero, Lucian Pârvulescu, Marta Pascual, Octávio S. Paulo, Martina Pavlek, Cinta Pegueroles, Loïc Pellissier, Graziano Pesole, Craig R. Primmer, Ana Riesgo, Lukas Rüber, Diego Rubolini, Daniele Salvi, Ole Seehausen, Matthias Seidel, Bruno Studer, Spyros Theodoridis, Marco Thines, Lara Urban, Anti Vasemägi, Adriana Vella, Noel Vella, Sonja C. Vernes, Cristiano Vernesi, David R. Vieites, Christopher W. Wheat, Gert Wörheide, Yannick Wurm, Gabrielle Zammit, How genomics can help biodiversity conservation, Trends in Genetics, Volume 39, Issue 7, 2023, Pages 545-559, ISSN 0168-9525, https://doi.org/10.1016/j.tig.2023.01.005.10.1016/j.tig.2023.01.005info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-08T17:07:11Zoai:repositorio.ul.pt:10451/58355Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T22:08:39.072868Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
How genomics can help biodiversity conservation |
title |
How genomics can help biodiversity conservation |
spellingShingle |
How genomics can help biodiversity conservation Theissinger, Kathrin |
title_short |
How genomics can help biodiversity conservation |
title_full |
How genomics can help biodiversity conservation |
title_fullStr |
How genomics can help biodiversity conservation |
title_full_unstemmed |
How genomics can help biodiversity conservation |
title_sort |
How genomics can help biodiversity conservation |
author |
Theissinger, Kathrin |
author_facet |
Theissinger, Kathrin Fernandes, C Formenti, Giulio Bista, Iliana Berg, Paul R. Bleidorn, Christoph Bombarely, Aureliano Crottini, Angelica Gallo, Guido R. Godoy, José A. Jentoft, Sissel Malukiewicz, Joanna Mouton, Alice Oomen, Rebekah A. Paez, Sadye Palsbøll, Per J. Pampoulie, Christophe Ruiz-López, María J. Secomandi, Simona Svardal, Hannes Theofanopoulou, Constantina de Vries, Jan Waldvogel, Ann-Marie Zhang, Guojie Jarvis, Erich D. Bálint, Miklós Ciofi, Claudio Waterhouse, Robert M. Mazzoni, Camila J. Höglund, Jacob Aghayan, Sargis A. Alioto, Tyler S. Almudi, Isabel Alvarez, Nadir Alves, Paulo C. Amorim do Rosario, Isabel R. Antunes, Agostinho Arribas, Paula Baldrian, Petr Bertorelle, Giorgio Böhne, Astrid Bonisoli-Alquati, Andrea Boštjančić, Ljudevit L. Boussau, Bastien Breton, Catherine M. Buzan, Elena Campos, Paula F. Carreras, Carlos Castro, L. FIlipe C. Chueca, Luis J. Čiampor, Fedor Conti, Elena Cook-Deegan, Robert Croll, Daniel Cunha, Mónica V. Delsuc, Frédéric Dennis, Alice B. Dimitrov, Dimitar Faria, Rui Favre, Adrien Fedrigo, Olivier D. Fernández, Rosa Ficetola, Gentile Francesco Flot, Jean-François Gabaldón, Toni Agius, Dolores R. Giani, Alice M. Gilbert, M. Thomas P. Grebenc, Tine Guschanski, Katerina Guyot, Romain Hausdorf, Bernhard Hawlitschek, Oliver Heintzman, Peter D. Heinze, Berthold Hiller, Michael Husemann, Martin Iannucci, Alessio Irisarri, Iker Jakobsen, Kjetill S. Klinga, Peter Kloch, Agnieszka Kratochwil, Claudius F. Kusche, Henrik Layton, Kara K.S. Leonard, Jennifer A. Lerat, Emmanuelle Liti, Gianni Manousaki, Tereza Marques-Bonet, Tomas Matos-Maraví, Pável Matschiner, Michael Maumus, Florian Mc Cartney, Ann M. Meiri, Shai Melo-Ferreira, José Mengual, Ximo Monaghan, Michael T. Montagna, Matteo Mysłajek, Robert W. Neiber, Marco T. Nicolas, Violaine Novo, Marta Ozretić, Petar Palero, Ferran Pârvulescu, Lucian Pascual, Marta Paulo, Octávio S. Pavlek, Martina Pegueroles, Cinta Pellissier, Loïc Pesole, Graziano Primmer, Craig R. Riesgo, Ana Rüber, Lukas Rubolini, Diego Salvi, Daniele Seehausen, Ole Seidel, Matthias Studer, Bruno Theodoridis, Spyros Thines, Marco Urban, Lara Vasemägi, Anti Vella, Adriana Vella, Noel Vernes, Sonja C. Vernesi, Cristiano Vieites, David R. Wheat, Christopher W. Wörheide, Gert Wurm, Yannick Zammit, Gabrielle |
author_role |
author |
author2 |
Fernandes, C Formenti, Giulio Bista, Iliana Berg, Paul R. Bleidorn, Christoph Bombarely, Aureliano Crottini, Angelica Gallo, Guido R. Godoy, José A. Jentoft, Sissel Malukiewicz, Joanna Mouton, Alice Oomen, Rebekah A. Paez, Sadye Palsbøll, Per J. Pampoulie, Christophe Ruiz-López, María J. Secomandi, Simona Svardal, Hannes Theofanopoulou, Constantina de Vries, Jan Waldvogel, Ann-Marie Zhang, Guojie Jarvis, Erich D. Bálint, Miklós Ciofi, Claudio Waterhouse, Robert M. Mazzoni, Camila J. Höglund, Jacob Aghayan, Sargis A. Alioto, Tyler S. Almudi, Isabel Alvarez, Nadir Alves, Paulo C. Amorim do Rosario, Isabel R. Antunes, Agostinho Arribas, Paula Baldrian, Petr Bertorelle, Giorgio Böhne, Astrid Bonisoli-Alquati, Andrea Boštjančić, Ljudevit L. Boussau, Bastien Breton, Catherine M. Buzan, Elena Campos, Paula F. Carreras, Carlos Castro, L. FIlipe C. Chueca, Luis J. Čiampor, Fedor Conti, Elena Cook-Deegan, Robert Croll, Daniel Cunha, Mónica V. Delsuc, Frédéric Dennis, Alice B. Dimitrov, Dimitar Faria, Rui Favre, Adrien Fedrigo, Olivier D. Fernández, Rosa Ficetola, Gentile Francesco Flot, Jean-François Gabaldón, Toni Agius, Dolores R. Giani, Alice M. Gilbert, M. Thomas P. Grebenc, Tine Guschanski, Katerina Guyot, Romain Hausdorf, Bernhard Hawlitschek, Oliver Heintzman, Peter D. Heinze, Berthold Hiller, Michael Husemann, Martin Iannucci, Alessio Irisarri, Iker Jakobsen, Kjetill S. Klinga, Peter Kloch, Agnieszka Kratochwil, Claudius F. Kusche, Henrik Layton, Kara K.S. Leonard, Jennifer A. Lerat, Emmanuelle Liti, Gianni Manousaki, Tereza Marques-Bonet, Tomas Matos-Maraví, Pável Matschiner, Michael Maumus, Florian Mc Cartney, Ann M. Meiri, Shai Melo-Ferreira, José Mengual, Ximo Monaghan, Michael T. Montagna, Matteo Mysłajek, Robert W. Neiber, Marco T. Nicolas, Violaine Novo, Marta Ozretić, Petar Palero, Ferran Pârvulescu, Lucian Pascual, Marta Paulo, Octávio S. Pavlek, Martina Pegueroles, Cinta Pellissier, Loïc Pesole, Graziano Primmer, Craig R. Riesgo, Ana Rüber, Lukas Rubolini, Diego Salvi, Daniele Seehausen, Ole Seidel, Matthias Studer, Bruno Theodoridis, Spyros Thines, Marco Urban, Lara Vasemägi, Anti Vella, Adriana Vella, Noel Vernes, Sonja C. Vernesi, Cristiano Vieites, David R. Wheat, Christopher W. Wörheide, Gert Wurm, Yannick Zammit, Gabrielle |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório da Universidade de Lisboa |
dc.contributor.author.fl_str_mv |
Theissinger, Kathrin Fernandes, C Formenti, Giulio Bista, Iliana Berg, Paul R. Bleidorn, Christoph Bombarely, Aureliano Crottini, Angelica Gallo, Guido R. Godoy, José A. Jentoft, Sissel Malukiewicz, Joanna Mouton, Alice Oomen, Rebekah A. Paez, Sadye Palsbøll, Per J. Pampoulie, Christophe Ruiz-López, María J. Secomandi, Simona Svardal, Hannes Theofanopoulou, Constantina de Vries, Jan Waldvogel, Ann-Marie Zhang, Guojie Jarvis, Erich D. Bálint, Miklós Ciofi, Claudio Waterhouse, Robert M. Mazzoni, Camila J. Höglund, Jacob Aghayan, Sargis A. Alioto, Tyler S. Almudi, Isabel Alvarez, Nadir Alves, Paulo C. Amorim do Rosario, Isabel R. Antunes, Agostinho Arribas, Paula Baldrian, Petr Bertorelle, Giorgio Böhne, Astrid Bonisoli-Alquati, Andrea Boštjančić, Ljudevit L. Boussau, Bastien Breton, Catherine M. Buzan, Elena Campos, Paula F. Carreras, Carlos Castro, L. FIlipe C. Chueca, Luis J. Čiampor, Fedor Conti, Elena Cook-Deegan, Robert Croll, Daniel Cunha, Mónica V. Delsuc, Frédéric Dennis, Alice B. Dimitrov, Dimitar Faria, Rui Favre, Adrien Fedrigo, Olivier D. Fernández, Rosa Ficetola, Gentile Francesco Flot, Jean-François Gabaldón, Toni Agius, Dolores R. Giani, Alice M. Gilbert, M. Thomas P. Grebenc, Tine Guschanski, Katerina Guyot, Romain Hausdorf, Bernhard Hawlitschek, Oliver Heintzman, Peter D. Heinze, Berthold Hiller, Michael Husemann, Martin Iannucci, Alessio Irisarri, Iker Jakobsen, Kjetill S. Klinga, Peter Kloch, Agnieszka Kratochwil, Claudius F. Kusche, Henrik Layton, Kara K.S. Leonard, Jennifer A. Lerat, Emmanuelle Liti, Gianni Manousaki, Tereza Marques-Bonet, Tomas Matos-Maraví, Pável Matschiner, Michael Maumus, Florian Mc Cartney, Ann M. Meiri, Shai Melo-Ferreira, José Mengual, Ximo Monaghan, Michael T. Montagna, Matteo Mysłajek, Robert W. Neiber, Marco T. Nicolas, Violaine Novo, Marta Ozretić, Petar Palero, Ferran Pârvulescu, Lucian Pascual, Marta Paulo, Octávio S. Pavlek, Martina Pegueroles, Cinta Pellissier, Loïc Pesole, Graziano Primmer, Craig R. Riesgo, Ana Rüber, Lukas Rubolini, Diego Salvi, Daniele Seehausen, Ole Seidel, Matthias Studer, Bruno Theodoridis, Spyros Thines, Marco Urban, Lara Vasemägi, Anti Vella, Adriana Vella, Noel Vernes, Sonja C. Vernesi, Cristiano Vieites, David R. Wheat, Christopher W. Wörheide, Gert Wurm, Yannick Zammit, Gabrielle |
description |
The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-06-27T18:01:04Z 2023-02 2023-02-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10451/58355 |
url |
http://hdl.handle.net/10451/58355 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Kathrin Theissinger, Carlos Fernandes, Giulio Formenti, Iliana Bista, Paul R. Berg, Christoph Bleidorn, Aureliano Bombarely, Angelica Crottini, Guido R. Gallo, José A. Godoy, Sissel Jentoft, Joanna Malukiewicz, Alice Mouton, Rebekah A. Oomen, Sadye Paez, Per J. Palsbøll, Christophe Pampoulie, María J. Ruiz-López, Simona Secomandi, Hannes Svardal, Constantina Theofanopoulou, Jan de Vries, Ann-Marie Waldvogel, Guojie Zhang, Erich D. Jarvis, Miklós Bálint, Claudio Ciofi, Robert M. Waterhouse, Camila J. Mazzoni, Jacob Höglund, Sargis A. Aghayan, Tyler S. Alioto, Isabel Almudi, Nadir Alvarez, Paulo C. Alves, Isabel R. Amorim do Rosario, Agostinho Antunes, Paula Arribas, Petr Baldrian, Giorgio Bertorelle, Astrid Böhne, Andrea Bonisoli-Alquati, Ljudevit L. Boštjančić, Bastien Boussau, Catherine M. Breton, Elena Buzan, Paula F. Campos, Carlos Carreras, L. FIlipe C. Castro, Luis J. Chueca, Fedor Čiampor, Elena Conti, Robert Cook-Deegan, Daniel Croll, Mónica V. Cunha, Frédéric Delsuc, Alice B. Dennis, Dimitar Dimitrov, Rui Faria, Adrien Favre, Olivier D. Fedrigo, Rosa Fernández, Gentile Francesco Ficetola, Jean-François Flot, Toni Gabaldón, Dolores R. Agius, Alice M. Giani, M. Thomas P. Gilbert, Tine Grebenc, Katerina Guschanski, Romain Guyot, Bernhard Hausdorf, Oliver Hawlitschek, Peter D. Heintzman, Berthold Heinze, Michael Hiller, Martin Husemann, Alessio Iannucci, Iker Irisarri, Kjetill S. Jakobsen, Peter Klinga, Agnieszka Kloch, Claudius F. Kratochwil, Henrik Kusche, Kara K.S. Layton, Jennifer A. Leonard, Emmanuelle Lerat, Gianni Liti, Tereza Manousaki, Tomas Marques-Bonet, Pável Matos-Maraví, Michael Matschiner, Florian Maumus, Ann M. Mc Cartney, Shai Meiri, José Melo-Ferreira, Ximo Mengual, Michael T. Monaghan, Matteo Montagna, Robert W. Mysłajek, Marco T. Neiber, Violaine Nicolas, Marta Novo, Petar Ozretić, Ferran Palero, Lucian Pârvulescu, Marta Pascual, Octávio S. Paulo, Martina Pavlek, Cinta Pegueroles, Loïc Pellissier, Graziano Pesole, Craig R. Primmer, Ana Riesgo, Lukas Rüber, Diego Rubolini, Daniele Salvi, Ole Seehausen, Matthias Seidel, Bruno Studer, Spyros Theodoridis, Marco Thines, Lara Urban, Anti Vasemägi, Adriana Vella, Noel Vella, Sonja C. Vernes, Cristiano Vernesi, David R. Vieites, Christopher W. Wheat, Gert Wörheide, Yannick Wurm, Gabrielle Zammit, How genomics can help biodiversity conservation, Trends in Genetics, Volume 39, Issue 7, 2023, Pages 545-559, ISSN 0168-9525, https://doi.org/10.1016/j.tig.2023.01.005. 10.1016/j.tig.2023.01.005 |
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CellPress |
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