Convergence of genes and cellular pathways dysregulated in autism spectrum disorders

Detalhes bibliográficos
Autor(a) principal: Pinto, D
Data de Publicação: 2014
Outros Autores: Delaby, E, Merico, D, Barbosa, M, Merikangas, A, Oliveira, G, et al
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.4/1714
Resumo: Rare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10(-5)) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10(-15), ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.
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spelling Convergence of genes and cellular pathways dysregulated in autism spectrum disordersPerturbações Globais do Desenvolvimento da CriançaVariações do Número de Cópias de DNAPerturbação AutísticaRare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10(-5)) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10(-15), ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.ElsevierRIHUCPinto, DDelaby, EMerico, DBarbosa, MMerikangas, AOliveira, Get al2014-07-30T16:12:11Z20142014-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.4/1714engAm J Hum Genet. 2014;94(5):677-94.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-11T14:22:59Zoai:rihuc.huc.min-saude.pt:10400.4/1714Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:04:11.236779Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
spellingShingle Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
Pinto, D
Perturbações Globais do Desenvolvimento da Criança
Variações do Número de Cópias de DNA
Perturbação Autística
title_short Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_full Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_fullStr Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_full_unstemmed Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_sort Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
author Pinto, D
author_facet Pinto, D
Delaby, E
Merico, D
Barbosa, M
Merikangas, A
Oliveira, G
et al
author_role author
author2 Delaby, E
Merico, D
Barbosa, M
Merikangas, A
Oliveira, G
et al
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv RIHUC
dc.contributor.author.fl_str_mv Pinto, D
Delaby, E
Merico, D
Barbosa, M
Merikangas, A
Oliveira, G
et al
dc.subject.por.fl_str_mv Perturbações Globais do Desenvolvimento da Criança
Variações do Número de Cópias de DNA
Perturbação Autística
topic Perturbações Globais do Desenvolvimento da Criança
Variações do Número de Cópias de DNA
Perturbação Autística
description Rare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10(-5)) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10(-15), ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.
publishDate 2014
dc.date.none.fl_str_mv 2014-07-30T16:12:11Z
2014
2014-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.4/1714
url http://hdl.handle.net/10400.4/1714
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Am J Hum Genet. 2014;94(5):677-94.
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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