Convergence of genes and cellular pathways dysregulated in autism spectrum disorders

Detalhes bibliográficos
Autor(a) principal: Pinto, D.
Data de Publicação: 2014
Outros Autores: Delaby, E., Merico, D., Barbosa, M., Merikangas, A., Klei, L, Thiruvahindrapuram, B., Xu, X., Ziman, R., Wang, Z., Vorstman, J.A., Thompson, A., Regan, R., Pilorge, M., Pellecchia, G., Pagnamenta, A.T., Oliveira, B., Marshall, C.R., Magalhães, T.R., Lowe, J.K., Howe, J.L., Griswold, A.J., Gilbert, J., Duketis, E., Dombroski, B.A., De Jonge, M.V., Cuccaro, M., Crawford, E.L., Correia, C.T., Conroy, J., Conceição, I.C, Chiocchetti, A.G., Casey, J.P., Cai, G., Cabrol, C., Bolshakova, N., Bacchelli, E., Anney, R., Gallinger, S., Cotterchio, M., Casey, G., Zwaigenbaum, L., Wittemeyer, K., Wing, K., Wallace, S., van Engeland, H., Tryfon, A., Thomson, S., Soorya, L., Rogé, B., Roberts, W., Poustka, F., Mouga, S., Minshew, N., McInnes, L.A., McGrew, S.G., Lord, C., Leboyer, M., Le Couteur, A.S., Kolevzon, A., Jiménez González, P., Jacob, S., Holt, R., Guter, S., Green, J., Green, A., Gillberg, C., Fernandez, B.A., Duque, F., Delorme, R., Dawson, G., Chaste, P., Café, C., Brennan, S., Bourgeron, T., Bolton, P.F., Bölte, S., Bernier, R., Baird, G., Bailey, A.J., Anagnostou, E., Almeida, J., Wijsman, E.M., Vieland, V.J., Vicente, A.M., Schellenberg, G.D., Pericak-Vance, M., Paterson, A.D., Parr, J.R., Oliveira, G., Nurnberger, J.I., Monaco, A.P., Maestrini, E., Klauck, S.M., Hakonarson, H., Haines, J.L., Geschwind, D.H., Freitag, C.M., Folstein, S.E., Ennis, S., Coon, H., Battaglia, A., Szatmari, P., Sutcliffe, J.S., Hallmayer, J., Gill, M., Cook, E.H., Buxbaum, J.D., Devlin, B., Gallagher, L., Betancur, C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/2278
Resumo: Rare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10(-5)) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10(-15), ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.
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spelling Convergence of genes and cellular pathways dysregulated in autism spectrum disordersPerturbações do Desenvolvimento Infantil e Saúde MentalRare copy-number variationAutism Spectrum DisordersAutismRare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10(-5)) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10(-15), ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.ElsevierRepositório Científico do Instituto Nacional de SaúdePinto, D.Delaby, E.Merico, D.Barbosa, M.Merikangas, A.Klei, LThiruvahindrapuram, B.Xu, X.Ziman, R.Wang, Z.Vorstman, J.A.Thompson, A.Regan, R.Pilorge, M.Pellecchia, G.Pagnamenta, A.T.Oliveira, B.Marshall, C.R.Magalhães, T.R.Lowe, J.K.Howe, J.L.Griswold, A.J.Gilbert, J.Duketis, E.Dombroski, B.A.De Jonge, M.V.Cuccaro, M.Crawford, E.L.Correia, C.T.Conroy, J.Conceição, I.CChiocchetti, A.G.Casey, J.P.Cai, G.Cabrol, C.Bolshakova, N.Bacchelli, E.Anney, R.Gallinger, S.Cotterchio, M.Casey, G.Zwaigenbaum, L.Wittemeyer, K.Wing, K.Wallace, S.van Engeland, H.Tryfon, A.Thomson, S.Soorya, L.Rogé, B.Roberts, W.Poustka, F.Mouga, S.Minshew, N.McInnes, L.A.McGrew, S.G.Lord, C.Leboyer, M.Le Couteur, A.S.Kolevzon, A.Jiménez González, P.Jacob, S.Holt, R.Guter, S.Green, J.Green, A.Gillberg, C.Fernandez, B.A.Duque, F.Delorme, R.Dawson, G.Chaste, P.Café, C.Brennan, S.Bourgeron, T.Bolton, P.F.Bölte, S.Bernier, R.Baird, G.Bailey, A.J.Anagnostou, E.Almeida, J.Wijsman, E.M.Vieland, V.J.Vicente, A.M.Schellenberg, G.D.Pericak-Vance, M.Paterson, A.D.Parr, J.R.Oliveira, G.Nurnberger, J.I.Monaco, A.P.Maestrini, E.Klauck, S.M.Hakonarson, H.Haines, J.L.Geschwind, D.H.Freitag, C.M.Folstein, S.E.Ennis, S.Coon, H.Battaglia, A.Szatmari, P.Sutcliffe, J.S.Hallmayer, J.Gill, M.Cook, E.H.Buxbaum, J.D.Devlin, B.Gallagher, L.Betancur, C.2014-05-23T11:02:23Z2014-052014-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/2278engAm J Hum Genet. 2014 May 1;94(5):677-94. doi: 10.1016/j.ajhg.2014.03.018. Epub 2014 Apr 240002-9297doi: 10.1016/j.ajhg.2014.03.018.info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:39:12Zoai:repositorio.insa.pt:10400.18/2278Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:37:18.900894Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
spellingShingle Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
Pinto, D.
Perturbações do Desenvolvimento Infantil e Saúde Mental
Rare copy-number variation
Autism Spectrum Disorders
Autism
title_short Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_full Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_fullStr Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_full_unstemmed Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
title_sort Convergence of genes and cellular pathways dysregulated in autism spectrum disorders
author Pinto, D.
author_facet Pinto, D.
Delaby, E.
Merico, D.
Barbosa, M.
Merikangas, A.
Klei, L
Thiruvahindrapuram, B.
Xu, X.
Ziman, R.
Wang, Z.
Vorstman, J.A.
Thompson, A.
Regan, R.
Pilorge, M.
Pellecchia, G.
Pagnamenta, A.T.
Oliveira, B.
Marshall, C.R.
Magalhães, T.R.
Lowe, J.K.
Howe, J.L.
Griswold, A.J.
Gilbert, J.
Duketis, E.
Dombroski, B.A.
De Jonge, M.V.
Cuccaro, M.
Crawford, E.L.
Correia, C.T.
Conroy, J.
Conceição, I.C
Chiocchetti, A.G.
Casey, J.P.
Cai, G.
Cabrol, C.
Bolshakova, N.
Bacchelli, E.
Anney, R.
Gallinger, S.
Cotterchio, M.
Casey, G.
Zwaigenbaum, L.
Wittemeyer, K.
Wing, K.
Wallace, S.
van Engeland, H.
Tryfon, A.
Thomson, S.
Soorya, L.
Rogé, B.
Roberts, W.
Poustka, F.
Mouga, S.
Minshew, N.
McInnes, L.A.
McGrew, S.G.
Lord, C.
Leboyer, M.
Le Couteur, A.S.
Kolevzon, A.
Jiménez González, P.
Jacob, S.
Holt, R.
Guter, S.
Green, J.
Green, A.
Gillberg, C.
Fernandez, B.A.
Duque, F.
Delorme, R.
Dawson, G.
Chaste, P.
Café, C.
Brennan, S.
Bourgeron, T.
Bolton, P.F.
Bölte, S.
Bernier, R.
Baird, G.
Bailey, A.J.
Anagnostou, E.
Almeida, J.
Wijsman, E.M.
Vieland, V.J.
Vicente, A.M.
Schellenberg, G.D.
Pericak-Vance, M.
Paterson, A.D.
Parr, J.R.
Oliveira, G.
Nurnberger, J.I.
Monaco, A.P.
Maestrini, E.
Klauck, S.M.
Hakonarson, H.
Haines, J.L.
Geschwind, D.H.
Freitag, C.M.
Folstein, S.E.
Ennis, S.
Coon, H.
Battaglia, A.
Szatmari, P.
Sutcliffe, J.S.
Hallmayer, J.
Gill, M.
Cook, E.H.
Buxbaum, J.D.
Devlin, B.
Gallagher, L.
Betancur, C.
author_role author
author2 Delaby, E.
Merico, D.
Barbosa, M.
Merikangas, A.
Klei, L
Thiruvahindrapuram, B.
Xu, X.
Ziman, R.
Wang, Z.
Vorstman, J.A.
Thompson, A.
Regan, R.
Pilorge, M.
Pellecchia, G.
Pagnamenta, A.T.
Oliveira, B.
Marshall, C.R.
Magalhães, T.R.
Lowe, J.K.
Howe, J.L.
Griswold, A.J.
Gilbert, J.
Duketis, E.
Dombroski, B.A.
De Jonge, M.V.
Cuccaro, M.
Crawford, E.L.
Correia, C.T.
Conroy, J.
Conceição, I.C
Chiocchetti, A.G.
Casey, J.P.
Cai, G.
Cabrol, C.
Bolshakova, N.
Bacchelli, E.
Anney, R.
Gallinger, S.
Cotterchio, M.
Casey, G.
Zwaigenbaum, L.
Wittemeyer, K.
Wing, K.
Wallace, S.
van Engeland, H.
Tryfon, A.
Thomson, S.
Soorya, L.
Rogé, B.
Roberts, W.
Poustka, F.
Mouga, S.
Minshew, N.
McInnes, L.A.
McGrew, S.G.
Lord, C.
Leboyer, M.
Le Couteur, A.S.
Kolevzon, A.
Jiménez González, P.
Jacob, S.
Holt, R.
Guter, S.
Green, J.
Green, A.
Gillberg, C.
Fernandez, B.A.
Duque, F.
Delorme, R.
Dawson, G.
Chaste, P.
Café, C.
Brennan, S.
Bourgeron, T.
Bolton, P.F.
Bölte, S.
Bernier, R.
Baird, G.
Bailey, A.J.
Anagnostou, E.
Almeida, J.
Wijsman, E.M.
Vieland, V.J.
Vicente, A.M.
Schellenberg, G.D.
Pericak-Vance, M.
Paterson, A.D.
Parr, J.R.
Oliveira, G.
Nurnberger, J.I.
Monaco, A.P.
Maestrini, E.
Klauck, S.M.
Hakonarson, H.
Haines, J.L.
Geschwind, D.H.
Freitag, C.M.
Folstein, S.E.
Ennis, S.
Coon, H.
Battaglia, A.
Szatmari, P.
Sutcliffe, J.S.
Hallmayer, J.
Gill, M.
Cook, E.H.
Buxbaum, J.D.
Devlin, B.
Gallagher, L.
Betancur, C.
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dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Pinto, D.
Delaby, E.
Merico, D.
Barbosa, M.
Merikangas, A.
Klei, L
Thiruvahindrapuram, B.
Xu, X.
Ziman, R.
Wang, Z.
Vorstman, J.A.
Thompson, A.
Regan, R.
Pilorge, M.
Pellecchia, G.
Pagnamenta, A.T.
Oliveira, B.
Marshall, C.R.
Magalhães, T.R.
Lowe, J.K.
Howe, J.L.
Griswold, A.J.
Gilbert, J.
Duketis, E.
Dombroski, B.A.
De Jonge, M.V.
Cuccaro, M.
Crawford, E.L.
Correia, C.T.
Conroy, J.
Conceição, I.C
Chiocchetti, A.G.
Casey, J.P.
Cai, G.
Cabrol, C.
Bolshakova, N.
Bacchelli, E.
Anney, R.
Gallinger, S.
Cotterchio, M.
Casey, G.
Zwaigenbaum, L.
Wittemeyer, K.
Wing, K.
Wallace, S.
van Engeland, H.
Tryfon, A.
Thomson, S.
Soorya, L.
Rogé, B.
Roberts, W.
Poustka, F.
Mouga, S.
Minshew, N.
McInnes, L.A.
McGrew, S.G.
Lord, C.
Leboyer, M.
Le Couteur, A.S.
Kolevzon, A.
Jiménez González, P.
Jacob, S.
Holt, R.
Guter, S.
Green, J.
Green, A.
Gillberg, C.
Fernandez, B.A.
Duque, F.
Delorme, R.
Dawson, G.
Chaste, P.
Café, C.
Brennan, S.
Bourgeron, T.
Bolton, P.F.
Bölte, S.
Bernier, R.
Baird, G.
Bailey, A.J.
Anagnostou, E.
Almeida, J.
Wijsman, E.M.
Vieland, V.J.
Vicente, A.M.
Schellenberg, G.D.
Pericak-Vance, M.
Paterson, A.D.
Parr, J.R.
Oliveira, G.
Nurnberger, J.I.
Monaco, A.P.
Maestrini, E.
Klauck, S.M.
Hakonarson, H.
Haines, J.L.
Geschwind, D.H.
Freitag, C.M.
Folstein, S.E.
Ennis, S.
Coon, H.
Battaglia, A.
Szatmari, P.
Sutcliffe, J.S.
Hallmayer, J.
Gill, M.
Cook, E.H.
Buxbaum, J.D.
Devlin, B.
Gallagher, L.
Betancur, C.
dc.subject.por.fl_str_mv Perturbações do Desenvolvimento Infantil e Saúde Mental
Rare copy-number variation
Autism Spectrum Disorders
Autism
topic Perturbações do Desenvolvimento Infantil e Saúde Mental
Rare copy-number variation
Autism Spectrum Disorders
Autism
description Rare copy-number variation (CNV) is an important source of risk for autism spectrum disorders (ASDs). We analyzed 2,446 ASD-affected families and confirmed an excess of genic deletions and duplications in affected versus control groups (1.41-fold, p = 1.0 × 10(-5)) and an increase in affected subjects carrying exonic pathogenic CNVs overlapping known loci associated with dominant or X-linked ASD and intellectual disability (odds ratio = 12.62, p = 2.7 × 10(-15), ∼3% of ASD subjects). Pathogenic CNVs, often showing variable expressivity, included rare de novo and inherited events at 36 loci, implicating ASD-associated genes (CHD2, HDAC4, and GDI1) previously linked to other neurodevelopmental disorders, as well as other genes such as SETD5, MIR137, and HDAC9. Consistent with hypothesized gender-specific modulators, females with ASD were more likely to have highly penetrant CNVs (p = 0.017) and were also overrepresented among subjects with fragile X syndrome protein targets (p = 0.02). Genes affected by de novo CNVs and/or loss-of-function single-nucleotide variants converged on networks related to neuronal signaling and development, synapse function, and chromatin regulation.
publishDate 2014
dc.date.none.fl_str_mv 2014-05-23T11:02:23Z
2014-05
2014-05-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/2278
url http://hdl.handle.net/10400.18/2278
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Am J Hum Genet. 2014 May 1;94(5):677-94. doi: 10.1016/j.ajhg.2014.03.018. Epub 2014 Apr 24
0002-9297
doi: 10.1016/j.ajhg.2014.03.018.
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
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dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
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