Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses

Detalhes bibliográficos
Autor(a) principal: Vieira, Paulo
Data de Publicação: 2007
Outros Autores: Burgermeister, Wolfgang, Mota, Manuel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/6789
Resumo: Random Amplified Polymorphic DNA (RAPD-PCR) technique was used in order to assess the level of genetic variability and genetic relationships among 24 Portuguese isolates of pinewood nematode, Bursaphelenchus xylophilus, representative of the fully affected area in Portugal. Two additional isolates of B. xylophilus, representing North America and East Asia were included, and B. mucronatus was used as out-group. Twenty-eight random primers generated a total of 640 DNA fragments. The Nei & Li similarity index revealed a high genetic similarity among the Portuguese isolates (above 90%). Hierarchical cluster analysis was performed to illustrate the relatedness among the isolates. No indication for separate groups among the Portuguese isolates was obtained, and the low level of genetic diversity strongly suggests that they were dispersed recently from a single introduction. The lack of apparent relationship between the genetic and the geographic matrices of the Portuguese isolates limits the use of this technique for following recent pathways of distribution. Genetic distance of the Portuguese isolates towards an isolate from China was much lower as compared to an isolate from the USA. This confirmed previous results suggesting an East Asian origin of the Portuguese B. xylophilus.
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spelling Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analysespinewood NematodeDNA fingerprintingRAPDsimilitaryRandom Amplified Polymorphic DNA (RAPD-PCR) technique was used in order to assess the level of genetic variability and genetic relationships among 24 Portuguese isolates of pinewood nematode, Bursaphelenchus xylophilus, representative of the fully affected area in Portugal. Two additional isolates of B. xylophilus, representing North America and East Asia were included, and B. mucronatus was used as out-group. Twenty-eight random primers generated a total of 640 DNA fragments. The Nei & Li similarity index revealed a high genetic similarity among the Portuguese isolates (above 90%). Hierarchical cluster analysis was performed to illustrate the relatedness among the isolates. No indication for separate groups among the Portuguese isolates was obtained, and the low level of genetic diversity strongly suggests that they were dispersed recently from a single introduction. The lack of apparent relationship between the genetic and the geographic matrices of the Portuguese isolates limits the use of this technique for following recent pathways of distribution. Genetic distance of the Portuguese isolates towards an isolate from China was much lower as compared to an isolate from the USA. This confirmed previous results suggesting an East Asian origin of the Portuguese B. xylophilus.2012-12-10T16:14:31Z2012-12-102007-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/6789http://hdl.handle.net/10174/6789eng118-12639ICAAMpvieira@uevora.ptndmmota@uevora.pt218Vieira, PauloBurgermeister, WolfgangMota, Manuelinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-03T18:46:20Zoai:dspace.uevora.pt:10174/6789Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:01:25.701411Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
title Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
spellingShingle Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
Vieira, Paulo
pinewood Nematode
DNA fingerprinting
RAPD
similitary
title_short Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
title_full Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
title_fullStr Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
title_full_unstemmed Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
title_sort Lack of genetic variation of Bursaphelencus xylophylus in Portugal revealed by RAPD-PCR analyses
author Vieira, Paulo
author_facet Vieira, Paulo
Burgermeister, Wolfgang
Mota, Manuel
author_role author
author2 Burgermeister, Wolfgang
Mota, Manuel
author2_role author
author
dc.contributor.author.fl_str_mv Vieira, Paulo
Burgermeister, Wolfgang
Mota, Manuel
dc.subject.por.fl_str_mv pinewood Nematode
DNA fingerprinting
RAPD
similitary
topic pinewood Nematode
DNA fingerprinting
RAPD
similitary
description Random Amplified Polymorphic DNA (RAPD-PCR) technique was used in order to assess the level of genetic variability and genetic relationships among 24 Portuguese isolates of pinewood nematode, Bursaphelenchus xylophilus, representative of the fully affected area in Portugal. Two additional isolates of B. xylophilus, representing North America and East Asia were included, and B. mucronatus was used as out-group. Twenty-eight random primers generated a total of 640 DNA fragments. The Nei & Li similarity index revealed a high genetic similarity among the Portuguese isolates (above 90%). Hierarchical cluster analysis was performed to illustrate the relatedness among the isolates. No indication for separate groups among the Portuguese isolates was obtained, and the low level of genetic diversity strongly suggests that they were dispersed recently from a single introduction. The lack of apparent relationship between the genetic and the geographic matrices of the Portuguese isolates limits the use of this technique for following recent pathways of distribution. Genetic distance of the Portuguese isolates towards an isolate from China was much lower as compared to an isolate from the USA. This confirmed previous results suggesting an East Asian origin of the Portuguese B. xylophilus.
publishDate 2007
dc.date.none.fl_str_mv 2007-01-01T00:00:00Z
2012-12-10T16:14:31Z
2012-12-10
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/6789
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url http://hdl.handle.net/10174/6789
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 118-126
39
ICAAM
pvieira@uevora.pt
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mmota@uevora.pt
218
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