Preservation methods in isolates of Sporothrix characterized by polyphasic approach

Detalhes bibliográficos
Autor(a) principal: de Souza Rabello, Vanessa Brito
Data de Publicação: 2023
Outros Autores: Corrêa-Moreira, Danielly, Santos, Cledir, Abreu Pinto, Tatiana Casto, Procopio-Azevedo, Anna Carolina, Boechat, Jéssica, Coelho, Rowena Alves, Almeida-Paes, Rodrigo, Costa, Gisela, Lima, Nelson, Zancopé-Oliveira, Rosely Maria, Marques Evangelista Oliveira, Manoel
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/81912
Resumo: Sporotrichosis is a subcutaneous mycosis with worldwide distribution and caused by eight pathogenic species of the Sporothrix genus. Different ex situ preservation methods are used around the world to maintain the survival, morphophysiological and genetic traits of fungal strains isolated from patients with sporotrichosis for long terms. The main aim of the present study was to evaluate the survival, phenotypic and genotypic stability of Sporothrix strains after preservation on PDA slant stored at 4 °C, sterile water and cryopreservation at −80 °C, for a period of time of 6, 12, 18 and 24 months of storage. Eight clinical Sporothrix isolates were identified based on a polyphasic approach consisting of classical macro- and micro-morphological traits, biochemical assays, proteomic profiles by MALDI-TOF MS and molecular biology. According to the final identification, one strain was identified as S. schenckii (CMRVS 40428) and seven strains were re-identified as S. brasiliensis (CMRVS 40421, CMRVS 40423, CMRVS 40424, CMRVS 40425, CMRVS 40426, CMRVS 40427 and CMRVS 40433). In addition, it was observed that the isolates survived after the different time points of storage in distilled water, PDA slant and cryopreservation at −80 °C. For fungi preserved in water, low polymorphisms were detected by the partial sequencing of β-tubulin. Cryopreservation at −80 °C induced morphological changes in one single isolate. The proteomic profiles obtained by MALDI-TOF MS after preservation showed differences among the methods. In conclusion, preservation on agar slant stored at 4 °C was the most effective method to preserve the eight clinical Sporothrix strains. This method produced less change in the phenotypic traits and kept the genetic integrity of all strains. Agar slant stored at 4 °C is a simple and inexpensive method and can be especially used in culture collections of limited funding and resources.
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spelling Preservation methods in isolates of Sporothrix characterized by polyphasic approachpreservationSporothrixphenotypegenotypeproteomicstabilityEngenharia e Tecnologia::Outras Engenharias e TecnologiasScience & TechnologySporotrichosis is a subcutaneous mycosis with worldwide distribution and caused by eight pathogenic species of the Sporothrix genus. Different ex situ preservation methods are used around the world to maintain the survival, morphophysiological and genetic traits of fungal strains isolated from patients with sporotrichosis for long terms. The main aim of the present study was to evaluate the survival, phenotypic and genotypic stability of Sporothrix strains after preservation on PDA slant stored at 4 °C, sterile water and cryopreservation at −80 °C, for a period of time of 6, 12, 18 and 24 months of storage. Eight clinical Sporothrix isolates were identified based on a polyphasic approach consisting of classical macro- and micro-morphological traits, biochemical assays, proteomic profiles by MALDI-TOF MS and molecular biology. According to the final identification, one strain was identified as S. schenckii (CMRVS 40428) and seven strains were re-identified as S. brasiliensis (CMRVS 40421, CMRVS 40423, CMRVS 40424, CMRVS 40425, CMRVS 40426, CMRVS 40427 and CMRVS 40433). In addition, it was observed that the isolates survived after the different time points of storage in distilled water, PDA slant and cryopreservation at −80 °C. For fungi preserved in water, low polymorphisms were detected by the partial sequencing of β-tubulin. Cryopreservation at −80 °C induced morphological changes in one single isolate. The proteomic profiles obtained by MALDI-TOF MS after preservation showed differences among the methods. In conclusion, preservation on agar slant stored at 4 °C was the most effective method to preserve the eight clinical Sporothrix strains. This method produced less change in the phenotypic traits and kept the genetic integrity of all strains. Agar slant stored at 4 °C is a simple and inexpensive method and can be especially used in culture collections of limited funding and resources.The authors are grateful to the Carlos Chagas Filho State Funding Agency (FAPERJ-Grants: JCNE E297 26/203.301/2017; JCNE E-26/201.433/2021–MMEO; E-26/202.737/2019), CAPES (Process 001; D.C.-M fellowship 88882.317297/2019-01), and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq-Grant Proc. 409227/2016-1). C. Santos thanks the funding from the Universidad de La Frontera through the research project FAPESP-UFRO 2020/07546-2. This study was also partially supported by the Portuguese Foundation for Science and Technology (FCT) under the scope of the strategic funding of the UID/BIO/04469/2019 unit, the BioTecNorte operation (NORTE-01-0145-FEDER-000004) funded by the European Regional Development Fund under the scope of Norte2020-Programa Operacional Regional do Norte and it also had the partial support of the European Union’s Horizon 2020 research and innovation programme under grant agreement No 871129 - IS_MIRRI21 Project.info:eu-repo/semantics/publishedVersionMDPIUniversidade do Minhode Souza Rabello, Vanessa BritoCorrêa-Moreira, DaniellySantos, CledirAbreu Pinto, Tatiana CastoProcopio-Azevedo, Anna CarolinaBoechat, JéssicaCoelho, Rowena AlvesAlmeida-Paes, RodrigoCosta, GiselaLima, NelsonZancopé-Oliveira, Rosely MariaMarques Evangelista Oliveira, Manoel20232023-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/81912engde Souza Rabello, V.B.; Corrêa-Moreira, D.; Santos, C.; Abreu Pinto, T.C.; Procopio-Azevedo, A.C.; Boechat, J.; Coelho, R.A.; Almeida-Paes, R.; Costa, G.; Lima, N.; Zancopé-Oliveira, R.M.; Marques Evangelista Oliveira, M. Preservation Methods in Isolates of Sporothrix Characterized by Polyphasic Approach. J. Fungi 2023, 9, 34. https://doi.org/10.3390/jof90100342309-608X10.3390/jof9010034https://www.mdpi.com/2309-608X/9/1/34info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:14:27Zoai:repositorium.sdum.uminho.pt:1822/81912Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:06:46.029084Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Preservation methods in isolates of Sporothrix characterized by polyphasic approach
title Preservation methods in isolates of Sporothrix characterized by polyphasic approach
spellingShingle Preservation methods in isolates of Sporothrix characterized by polyphasic approach
de Souza Rabello, Vanessa Brito
preservation
Sporothrix
phenotype
genotype
proteomic
stability
Engenharia e Tecnologia::Outras Engenharias e Tecnologias
Science & Technology
title_short Preservation methods in isolates of Sporothrix characterized by polyphasic approach
title_full Preservation methods in isolates of Sporothrix characterized by polyphasic approach
title_fullStr Preservation methods in isolates of Sporothrix characterized by polyphasic approach
title_full_unstemmed Preservation methods in isolates of Sporothrix characterized by polyphasic approach
title_sort Preservation methods in isolates of Sporothrix characterized by polyphasic approach
author de Souza Rabello, Vanessa Brito
author_facet de Souza Rabello, Vanessa Brito
Corrêa-Moreira, Danielly
Santos, Cledir
Abreu Pinto, Tatiana Casto
Procopio-Azevedo, Anna Carolina
Boechat, Jéssica
Coelho, Rowena Alves
Almeida-Paes, Rodrigo
Costa, Gisela
Lima, Nelson
Zancopé-Oliveira, Rosely Maria
Marques Evangelista Oliveira, Manoel
author_role author
author2 Corrêa-Moreira, Danielly
Santos, Cledir
Abreu Pinto, Tatiana Casto
Procopio-Azevedo, Anna Carolina
Boechat, Jéssica
Coelho, Rowena Alves
Almeida-Paes, Rodrigo
Costa, Gisela
Lima, Nelson
Zancopé-Oliveira, Rosely Maria
Marques Evangelista Oliveira, Manoel
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv de Souza Rabello, Vanessa Brito
Corrêa-Moreira, Danielly
Santos, Cledir
Abreu Pinto, Tatiana Casto
Procopio-Azevedo, Anna Carolina
Boechat, Jéssica
Coelho, Rowena Alves
Almeida-Paes, Rodrigo
Costa, Gisela
Lima, Nelson
Zancopé-Oliveira, Rosely Maria
Marques Evangelista Oliveira, Manoel
dc.subject.por.fl_str_mv preservation
Sporothrix
phenotype
genotype
proteomic
stability
Engenharia e Tecnologia::Outras Engenharias e Tecnologias
Science & Technology
topic preservation
Sporothrix
phenotype
genotype
proteomic
stability
Engenharia e Tecnologia::Outras Engenharias e Tecnologias
Science & Technology
description Sporotrichosis is a subcutaneous mycosis with worldwide distribution and caused by eight pathogenic species of the Sporothrix genus. Different ex situ preservation methods are used around the world to maintain the survival, morphophysiological and genetic traits of fungal strains isolated from patients with sporotrichosis for long terms. The main aim of the present study was to evaluate the survival, phenotypic and genotypic stability of Sporothrix strains after preservation on PDA slant stored at 4 °C, sterile water and cryopreservation at −80 °C, for a period of time of 6, 12, 18 and 24 months of storage. Eight clinical Sporothrix isolates were identified based on a polyphasic approach consisting of classical macro- and micro-morphological traits, biochemical assays, proteomic profiles by MALDI-TOF MS and molecular biology. According to the final identification, one strain was identified as S. schenckii (CMRVS 40428) and seven strains were re-identified as S. brasiliensis (CMRVS 40421, CMRVS 40423, CMRVS 40424, CMRVS 40425, CMRVS 40426, CMRVS 40427 and CMRVS 40433). In addition, it was observed that the isolates survived after the different time points of storage in distilled water, PDA slant and cryopreservation at −80 °C. For fungi preserved in water, low polymorphisms were detected by the partial sequencing of β-tubulin. Cryopreservation at −80 °C induced morphological changes in one single isolate. The proteomic profiles obtained by MALDI-TOF MS after preservation showed differences among the methods. In conclusion, preservation on agar slant stored at 4 °C was the most effective method to preserve the eight clinical Sporothrix strains. This method produced less change in the phenotypic traits and kept the genetic integrity of all strains. Agar slant stored at 4 °C is a simple and inexpensive method and can be especially used in culture collections of limited funding and resources.
publishDate 2023
dc.date.none.fl_str_mv 2023
2023-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/81912
url https://hdl.handle.net/1822/81912
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv de Souza Rabello, V.B.; Corrêa-Moreira, D.; Santos, C.; Abreu Pinto, T.C.; Procopio-Azevedo, A.C.; Boechat, J.; Coelho, R.A.; Almeida-Paes, R.; Costa, G.; Lima, N.; Zancopé-Oliveira, R.M.; Marques Evangelista Oliveira, M. Preservation Methods in Isolates of Sporothrix Characterized by Polyphasic Approach. J. Fungi 2023, 9, 34. https://doi.org/10.3390/jof9010034
2309-608X
10.3390/jof9010034
https://www.mdpi.com/2309-608X/9/1/34
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publisher.none.fl_str_mv MDPI
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