Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.1/14883 |
Resumo: | This working document analyzes the catch, effort and standardized CPUE trends for the north Atlantic blue shark captured by the Portuguese pelagic longline fleet. Nominal annual CPUE were calculated as kg/1000 hooks and were standardized with Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) using year, quarter, area, gear type, targeting effects and area:quarter interactions as fixed factors, and year:area as random effects. Sensitivity analyzes were carried out for the model type (lognormal, tweedie, gamma or delta lognormal), the definition of targeting effects (based on ratios or cluster analysis), and definition of areas. Model goodness-of-fit and comparison was carried out with AIC and the pseudo coefficient of determination (R2 ), and model validation with a residual analysis. The final standardized CPUE trend shows a general increase over the studied period, between 1997 and 2014, with some inter-annual oscillations. This paper presents the first index of abundance for the blue shark estimated from captures from the Portuguese pelagic longline fleet in the North Atlantic, and can be used in future stock assessments models. |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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spelling |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north AtlanticBlue sharkPrionace glaucaCPUE standardizationNorth AtlanticCatch/effortLongline fisheriesFishery indicatorsGeneralized linear modelsGeneralized linear mixed modelsThis working document analyzes the catch, effort and standardized CPUE trends for the north Atlantic blue shark captured by the Portuguese pelagic longline fleet. Nominal annual CPUE were calculated as kg/1000 hooks and were standardized with Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) using year, quarter, area, gear type, targeting effects and area:quarter interactions as fixed factors, and year:area as random effects. Sensitivity analyzes were carried out for the model type (lognormal, tweedie, gamma or delta lognormal), the definition of targeting effects (based on ratios or cluster analysis), and definition of areas. Model goodness-of-fit and comparison was carried out with AIC and the pseudo coefficient of determination (R2 ), and model validation with a residual analysis. The final standardized CPUE trend shows a general increase over the studied period, between 1997 and 2014, with some inter-annual oscillations. This paper presents the first index of abundance for the blue shark estimated from captures from the Portuguese pelagic longline fleet in the North Atlantic, and can be used in future stock assessments models.ICCAT - International Commission for the Conservation of Atlantic TunasSapientiaCoelho, RuiSantos, MiguelLino, Pedro2020-12-04T11:50:27Z20162016-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/14883enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-11-29T10:27:23Zoai:sapientia.ualg.pt:10400.1/14883Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-11-29T10:27:23Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
title |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
spellingShingle |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic Coelho, Rui Blue shark Prionace glauca CPUE standardization North Atlantic Catch/effort Longline fisheries Fishery indicators Generalized linear models Generalized linear mixed models |
title_short |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
title_full |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
title_fullStr |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
title_full_unstemmed |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
title_sort |
Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic |
author |
Coelho, Rui |
author_facet |
Coelho, Rui Santos, Miguel Lino, Pedro |
author_role |
author |
author2 |
Santos, Miguel Lino, Pedro |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
Sapientia |
dc.contributor.author.fl_str_mv |
Coelho, Rui Santos, Miguel Lino, Pedro |
dc.subject.por.fl_str_mv |
Blue shark Prionace glauca CPUE standardization North Atlantic Catch/effort Longline fisheries Fishery indicators Generalized linear models Generalized linear mixed models |
topic |
Blue shark Prionace glauca CPUE standardization North Atlantic Catch/effort Longline fisheries Fishery indicators Generalized linear models Generalized linear mixed models |
description |
This working document analyzes the catch, effort and standardized CPUE trends for the north Atlantic blue shark captured by the Portuguese pelagic longline fleet. Nominal annual CPUE were calculated as kg/1000 hooks and were standardized with Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) using year, quarter, area, gear type, targeting effects and area:quarter interactions as fixed factors, and year:area as random effects. Sensitivity analyzes were carried out for the model type (lognormal, tweedie, gamma or delta lognormal), the definition of targeting effects (based on ratios or cluster analysis), and definition of areas. Model goodness-of-fit and comparison was carried out with AIC and the pseudo coefficient of determination (R2 ), and model validation with a residual analysis. The final standardized CPUE trend shows a general increase over the studied period, between 1997 and 2014, with some inter-annual oscillations. This paper presents the first index of abundance for the blue shark estimated from captures from the Portuguese pelagic longline fleet in the North Atlantic, and can be used in future stock assessments models. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016 2016-01-01T00:00:00Z 2020-12-04T11:50:27Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.1/14883 |
url |
http://hdl.handle.net/10400.1/14883 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
ICCAT - International Commission for the Conservation of Atlantic Tunas |
publisher.none.fl_str_mv |
ICCAT - International Commission for the Conservation of Atlantic Tunas |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
_version_ |
1817549703596736512 |