Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10316/27275 https://doi.org/10.1016/j.eswa.2013.06.023 |
Resumo: | To improve applicability of automatic sleep staging an efficient subject-independent method is proposed with application in sleep–wake detection and in multiclass sleep staging (awake, non-rapid eye movement (NREM) sleep and rapid eye movement (REM) sleep). In turn, NREM is further divided into three stages denoted here by N1, N2, and N3. To assess the method, polysomnographic (PSG) records of 40 patients from our ISRUC-Sleep dataset, which was scored by an expert clinician in the central hospital of Coimbra, are used. To find the best combination of PSG signals for automatic sleep staging, six electroencephalographic (EEG), two electrooculographic (EOG), and one electromyographic (EMG) channels are analyzed. An extensive set of feature extraction techniques are applied, covering temporal, frequency and time–frequency domains. The maximum overlap wavelet transform (MODWT), a shift invariant transform, was used to extract the features in time–frequency domain. The extracted feature set is transformed and normalized to reduce the effect of extreme values of features. The most discriminative features are selected through a two-step method composed by a manual selection step based on features’ histogram analysis followed by an automatic feature selector. The selected feature set is classified using support vector machines (SVMs). The system achieved the best performance by combining 6 channels (C3, C4, O1, left EOG (LOC), right EOG (ROC) and chin EMG (X1)) for sleep–wake detection, and 9 channels (C3, C4, O1, O2, F3, F4, LOC, ROC, X1) for multiclass sleep staging. |
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Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channelsAutomatic sleep stagingThe maximum overlap discrete wavelet transformPolysomnographic signalsFeatures selectionSleep datasetTo improve applicability of automatic sleep staging an efficient subject-independent method is proposed with application in sleep–wake detection and in multiclass sleep staging (awake, non-rapid eye movement (NREM) sleep and rapid eye movement (REM) sleep). In turn, NREM is further divided into three stages denoted here by N1, N2, and N3. To assess the method, polysomnographic (PSG) records of 40 patients from our ISRUC-Sleep dataset, which was scored by an expert clinician in the central hospital of Coimbra, are used. To find the best combination of PSG signals for automatic sleep staging, six electroencephalographic (EEG), two electrooculographic (EOG), and one electromyographic (EMG) channels are analyzed. An extensive set of feature extraction techniques are applied, covering temporal, frequency and time–frequency domains. The maximum overlap wavelet transform (MODWT), a shift invariant transform, was used to extract the features in time–frequency domain. The extracted feature set is transformed and normalized to reduce the effect of extreme values of features. The most discriminative features are selected through a two-step method composed by a manual selection step based on features’ histogram analysis followed by an automatic feature selector. The selected feature set is classified using support vector machines (SVMs). The system achieved the best performance by combining 6 channels (C3, C4, O1, left EOG (LOC), right EOG (ROC) and chin EMG (X1)) for sleep–wake detection, and 9 channels (C3, C4, O1, O2, F3, F4, LOC, ROC, X1) for multiclass sleep staging.Elsevier2013-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/27275http://hdl.handle.net/10316/27275https://doi.org/10.1016/j.eswa.2013.06.023engKHALIGHI, Sirvan [et. al] - Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels. "Expert Systems with Applications". ISSN 0957-4174. Vol. 40 Nº. 17 (2013) p. 7046-70590957-4174http://www.sciencedirect.com/science/article/pii/S095741741300403XKhalighi, SirvanSousa, TeresaPires, GabrielNunes, Urbanoinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2021-03-05T10:45:29Zoai:estudogeral.uc.pt:10316/27275Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:57:55.409503Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
title |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
spellingShingle |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels Khalighi, Sirvan Automatic sleep staging The maximum overlap discrete wavelet transform Polysomnographic signals Features selection Sleep dataset |
title_short |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
title_full |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
title_fullStr |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
title_full_unstemmed |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
title_sort |
Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels |
author |
Khalighi, Sirvan |
author_facet |
Khalighi, Sirvan Sousa, Teresa Pires, Gabriel Nunes, Urbano |
author_role |
author |
author2 |
Sousa, Teresa Pires, Gabriel Nunes, Urbano |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Khalighi, Sirvan Sousa, Teresa Pires, Gabriel Nunes, Urbano |
dc.subject.por.fl_str_mv |
Automatic sleep staging The maximum overlap discrete wavelet transform Polysomnographic signals Features selection Sleep dataset |
topic |
Automatic sleep staging The maximum overlap discrete wavelet transform Polysomnographic signals Features selection Sleep dataset |
description |
To improve applicability of automatic sleep staging an efficient subject-independent method is proposed with application in sleep–wake detection and in multiclass sleep staging (awake, non-rapid eye movement (NREM) sleep and rapid eye movement (REM) sleep). In turn, NREM is further divided into three stages denoted here by N1, N2, and N3. To assess the method, polysomnographic (PSG) records of 40 patients from our ISRUC-Sleep dataset, which was scored by an expert clinician in the central hospital of Coimbra, are used. To find the best combination of PSG signals for automatic sleep staging, six electroencephalographic (EEG), two electrooculographic (EOG), and one electromyographic (EMG) channels are analyzed. An extensive set of feature extraction techniques are applied, covering temporal, frequency and time–frequency domains. The maximum overlap wavelet transform (MODWT), a shift invariant transform, was used to extract the features in time–frequency domain. The extracted feature set is transformed and normalized to reduce the effect of extreme values of features. The most discriminative features are selected through a two-step method composed by a manual selection step based on features’ histogram analysis followed by an automatic feature selector. The selected feature set is classified using support vector machines (SVMs). The system achieved the best performance by combining 6 channels (C3, C4, O1, left EOG (LOC), right EOG (ROC) and chin EMG (X1)) for sleep–wake detection, and 9 channels (C3, C4, O1, O2, F3, F4, LOC, ROC, X1) for multiclass sleep staging. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-12-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10316/27275 http://hdl.handle.net/10316/27275 https://doi.org/10.1016/j.eswa.2013.06.023 |
url |
http://hdl.handle.net/10316/27275 https://doi.org/10.1016/j.eswa.2013.06.023 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
KHALIGHI, Sirvan [et. al] - Automatic sleep staging: a computer assisted approach for optimal combination of features and polysomnographic channels. "Expert Systems with Applications". ISSN 0957-4174. Vol. 40 Nº. 17 (2013) p. 7046-7059 0957-4174 http://www.sciencedirect.com/science/article/pii/S095741741300403X |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799133869330399232 |