Insect-specific viruses in the Parvoviridae family

Detalhes bibliográficos
Autor(a) principal: Morais, Paulo
Data de Publicação: 2022
Outros Autores: Trovão, Nídia S, Abecasis, Ana B, Parreira, Ricardo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/136261
Resumo: Copyright © 2022 Elsevier B.V. All rights reserved.
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spelling Insect-specific viruses in the Parvoviridae familyGenetic lineage characterization and spatiotemporal dynamics of the recently established Brevihamaparvovirus genusAnimalsGenome, ViralInsect Viruses/geneticsInsectaParvoviridae/geneticsParvoviridae InfectionsParvovirus/geneticsPhylogenyGeneticsVirologyInsect ScienceSDG 15 - Life on LandSDG 3 - Good Health and Well-beingCopyright © 2022 Elsevier B.V. All rights reserved.The analysis of the viruses allocated to the recently established Brevihamaparvovirus genus (Parvoviridae family), which includes all previously known brevidensoviruses, has not yet been carried out on an extensive basis. As a result, no detailed genetic lineage characterization has ever been performed for this group of insect-specific viruses. Using a wide range of molecular tools, we have explored this taxon by calculating Shannon entropy values, intra- and inter-taxon genetic distances, analysed sequence polymorphisms, and evaluated selective pressures acting on the viral genome. While the calculated Brevihamaparvovirus mutation rates were within the range of those of other parvoviruses, their genomes look to be under strong purifying selection, and are also characterized by low diversity and entropy. Furthermore, even though recombination events are quite common among parvoviruses, no evidence of recombination (either intra or intergenic) was found in the Brevihamaparvoviruses sequences analyzed. An extended taxonomic analysis and reevaluation of existing Brevihamaparvoviruses sequences, many still unclassified, was performed using cut-off values defining NS1 identity between viral sequences from the Parvovirus family. Two existing genetic lineages, Dipteran Brevihamaparvovirus 1 and Dipteran Brevihamaparvovirus 2, were rearranged and the creation of a new one, Dipteran Brevihamaparvovirus 3, was suggested. Finally, despite the uncertainties associated with both the time estimates of the most recent common ancestors, which could span from twenty thousand years before the current era to way earlier (in the last century), and the dispersal routes proposed for Brevihamaparvoviruses sequences by phylodynamic reconstruction, the analyses here presented could help define how future studies should be conducted as more isolates continue to be identified in the future, and contribute to eliminating possible analytical biases.TB, HIV and opportunistic diseases and pathogens (THOP)Global Health and Tropical Medicine (GHTM)Instituto de Higiene e Medicina Tropical (IHMT)Vector borne diseases and pathogens (VBD)RUNMorais, PauloTrovão, Nídia SAbecasis, Ana BParreira, Ricardo2022-04-11T22:37:09Z2022-052022-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10362/136261eng0168-1702PURE: 43047038https://doi.org/10.1016/j.virusres.2022.198728info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-05-22T18:01:03Zoai:run.unl.pt:10362/136261Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-05-22T18:01:03Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Insect-specific viruses in the Parvoviridae family
Genetic lineage characterization and spatiotemporal dynamics of the recently established Brevihamaparvovirus genus
title Insect-specific viruses in the Parvoviridae family
spellingShingle Insect-specific viruses in the Parvoviridae family
Morais, Paulo
Animals
Genome, Viral
Insect Viruses/genetics
Insecta
Parvoviridae/genetics
Parvoviridae Infections
Parvovirus/genetics
Phylogeny
Genetics
Virology
Insect Science
SDG 15 - Life on Land
SDG 3 - Good Health and Well-being
title_short Insect-specific viruses in the Parvoviridae family
title_full Insect-specific viruses in the Parvoviridae family
title_fullStr Insect-specific viruses in the Parvoviridae family
title_full_unstemmed Insect-specific viruses in the Parvoviridae family
title_sort Insect-specific viruses in the Parvoviridae family
author Morais, Paulo
author_facet Morais, Paulo
Trovão, Nídia S
Abecasis, Ana B
Parreira, Ricardo
author_role author
author2 Trovão, Nídia S
Abecasis, Ana B
Parreira, Ricardo
author2_role author
author
author
dc.contributor.none.fl_str_mv TB, HIV and opportunistic diseases and pathogens (THOP)
Global Health and Tropical Medicine (GHTM)
Instituto de Higiene e Medicina Tropical (IHMT)
Vector borne diseases and pathogens (VBD)
RUN
dc.contributor.author.fl_str_mv Morais, Paulo
Trovão, Nídia S
Abecasis, Ana B
Parreira, Ricardo
dc.subject.por.fl_str_mv Animals
Genome, Viral
Insect Viruses/genetics
Insecta
Parvoviridae/genetics
Parvoviridae Infections
Parvovirus/genetics
Phylogeny
Genetics
Virology
Insect Science
SDG 15 - Life on Land
SDG 3 - Good Health and Well-being
topic Animals
Genome, Viral
Insect Viruses/genetics
Insecta
Parvoviridae/genetics
Parvoviridae Infections
Parvovirus/genetics
Phylogeny
Genetics
Virology
Insect Science
SDG 15 - Life on Land
SDG 3 - Good Health and Well-being
description Copyright © 2022 Elsevier B.V. All rights reserved.
publishDate 2022
dc.date.none.fl_str_mv 2022-04-11T22:37:09Z
2022-05
2022-05-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/136261
url http://hdl.handle.net/10362/136261
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0168-1702
PURE: 43047038
https://doi.org/10.1016/j.virusres.2022.198728
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv mluisa.alvim@gmail.com
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