Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish

Detalhes bibliográficos
Autor(a) principal: Esteves, Rita Maria Santos
Data de Publicação: 2016
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/21501
Resumo: Integration of sensory input and computation of behavioural output is a dynamic process involving diverse populations of cells often distributed throughout the brain. To study this topic, monitoring neuronal activity from a large population of cells and manipulating targeted neuronal activity in a behaving animal is crucial. This is possible in zebrafish, due to its small and transparent larval brain and its genetic malleability, by making use of optogenetic tools that allow reversible light-dependent activation and inhibition of neuronal activity, and genetically encoded calcium indicators (GECI) that enable non-invasive activity recording. State-of-the-art optogenetic tools with faster kinetics and higher sensitivity facilitate reliable manipulation of activity with high temporal precision during behaviour. Such tools have been developed to be compatible with better calcium indicators to successfully manipulate and optically record neuronal activity simultaneously. In this project, the latest developed optogenetic tools - activators ChrimsonR, C1V1(t/t) and Chronos, inhibitor Jaws, red calcium sensor jRCaMP1b and nuclear markers H2B-RFP and H2B-mCherry - were optimized to be expressed in zebrafish. Behavioural assays to characterize the activating and inhibitory optogenetic tools ChrimsonR and Jaws were established. An escape response of short latency could reliably be evoked in transgenic animals with stable expression of ChrimsonR in trigeminal neurons. Combination of this fast, sensitive and red-shifted tool with GCaMP calcium imaging opens the possibility to simultaneously manipulate and record activity with high spatial and temporal precision from a large population of neurons to study their dynamic interactions during behaviour.
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spelling Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in ZebrafishOptogeneticsGECIZebrafishNeurobiologyNeural circuitsDomínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e TecnologiasIntegration of sensory input and computation of behavioural output is a dynamic process involving diverse populations of cells often distributed throughout the brain. To study this topic, monitoring neuronal activity from a large population of cells and manipulating targeted neuronal activity in a behaving animal is crucial. This is possible in zebrafish, due to its small and transparent larval brain and its genetic malleability, by making use of optogenetic tools that allow reversible light-dependent activation and inhibition of neuronal activity, and genetically encoded calcium indicators (GECI) that enable non-invasive activity recording. State-of-the-art optogenetic tools with faster kinetics and higher sensitivity facilitate reliable manipulation of activity with high temporal precision during behaviour. Such tools have been developed to be compatible with better calcium indicators to successfully manipulate and optically record neuronal activity simultaneously. In this project, the latest developed optogenetic tools - activators ChrimsonR, C1V1(t/t) and Chronos, inhibitor Jaws, red calcium sensor jRCaMP1b and nuclear markers H2B-RFP and H2B-mCherry - were optimized to be expressed in zebrafish. Behavioural assays to characterize the activating and inhibitory optogenetic tools ChrimsonR and Jaws were established. An escape response of short latency could reliably be evoked in transgenic animals with stable expression of ChrimsonR in trigeminal neurons. Combination of this fast, sensitive and red-shifted tool with GCaMP calcium imaging opens the possibility to simultaneously manipulate and record activity with high spatial and temporal precision from a large population of neurons to study their dynamic interactions during behaviour.Orger, MichaelCertal, AnaRUNEsteves, Rita Maria Santos2017-06-09T14:27:12Z2016-112017-062016-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/21501enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:08:15Zoai:run.unl.pt:10362/21501Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:26:49.701547Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
title Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
spellingShingle Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
Esteves, Rita Maria Santos
Optogenetics
GECI
Zebrafish
Neurobiology
Neural circuits
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
title_short Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
title_full Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
title_fullStr Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
title_full_unstemmed Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
title_sort Development of Optogenetic Tools for Manipulating Neuronal Activity and Behaviour in Zebrafish
author Esteves, Rita Maria Santos
author_facet Esteves, Rita Maria Santos
author_role author
dc.contributor.none.fl_str_mv Orger, Michael
Certal, Ana
RUN
dc.contributor.author.fl_str_mv Esteves, Rita Maria Santos
dc.subject.por.fl_str_mv Optogenetics
GECI
Zebrafish
Neurobiology
Neural circuits
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
topic Optogenetics
GECI
Zebrafish
Neurobiology
Neural circuits
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
description Integration of sensory input and computation of behavioural output is a dynamic process involving diverse populations of cells often distributed throughout the brain. To study this topic, monitoring neuronal activity from a large population of cells and manipulating targeted neuronal activity in a behaving animal is crucial. This is possible in zebrafish, due to its small and transparent larval brain and its genetic malleability, by making use of optogenetic tools that allow reversible light-dependent activation and inhibition of neuronal activity, and genetically encoded calcium indicators (GECI) that enable non-invasive activity recording. State-of-the-art optogenetic tools with faster kinetics and higher sensitivity facilitate reliable manipulation of activity with high temporal precision during behaviour. Such tools have been developed to be compatible with better calcium indicators to successfully manipulate and optically record neuronal activity simultaneously. In this project, the latest developed optogenetic tools - activators ChrimsonR, C1V1(t/t) and Chronos, inhibitor Jaws, red calcium sensor jRCaMP1b and nuclear markers H2B-RFP and H2B-mCherry - were optimized to be expressed in zebrafish. Behavioural assays to characterize the activating and inhibitory optogenetic tools ChrimsonR and Jaws were established. An escape response of short latency could reliably be evoked in transgenic animals with stable expression of ChrimsonR in trigeminal neurons. Combination of this fast, sensitive and red-shifted tool with GCaMP calcium imaging opens the possibility to simultaneously manipulate and record activity with high spatial and temporal precision from a large population of neurons to study their dynamic interactions during behaviour.
publishDate 2016
dc.date.none.fl_str_mv 2016-11
2016-11-01T00:00:00Z
2017-06-09T14:27:12Z
2017-06
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/21501
url http://hdl.handle.net/10362/21501
dc.language.iso.fl_str_mv eng
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eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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