Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies

Detalhes bibliográficos
Autor(a) principal: Møller, Peter
Data de Publicação: 2021
Outros Autores: Bankoglu, Ezgi Eyluel, Stopper, Helga, Giovannelli, Lisa, Ladeira, Carina, Koppen, Gudrun, Gajski, Goran, Collins, Andrew, Valdiglesias, Vanessa, Laffon, Blanca, Boutet-Robinet, Elisa, Perdry, Hervé, Del Bo’, Cristian, Langie, Sabine A S, Dusinska, Maria, Azqueta, Amaya
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.21/13625
Resumo: DNA damage and repair activity are often assessed in blood samples from humans in different types of molecular epidemiology studies. However, it is not always feasible to analyze the samples on the day of collection without any type of storage. For instance, certain studies use repeated sampling of cells from the same subject or samples from different subjects collected at different time points, and it is desirable to analyze all these samples in the same comet assay experiment. In addition, flawless comet assay analyses on frozen samples open up the possibility of using this technique on biobank material. In this article, we discuss the use of cryopreserved peripheral blood mononuclear cells (PBMCs), buffy coat (BC), and whole blood (WB) for analysis of DNA damage and repair using the comet assay. The published literature and the authors' experiences indicate that various types of blood samples can be cryopreserved with only a minor effect on the basal level of DNA damage. There is evidence to suggest that WB and PBMCs can be cryopreserved for several years without much effect on the level of DNA damage. However, care should be taken when cryopreserving WB and BCs. It is possible to use either fresh or frozen samples of blood cells, but results from fresh and frozen cells should not be used in the same dataset. The article outlines detailed protocols for the cryopreservation of PBMCs, BCs, and WB samples.
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spelling Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studiesComet assayCryopreservationDNADNA damageEpidemiologyMolecularLeucocytesWhole bloodDNA damage and repair activity are often assessed in blood samples from humans in different types of molecular epidemiology studies. However, it is not always feasible to analyze the samples on the day of collection without any type of storage. For instance, certain studies use repeated sampling of cells from the same subject or samples from different subjects collected at different time points, and it is desirable to analyze all these samples in the same comet assay experiment. In addition, flawless comet assay analyses on frozen samples open up the possibility of using this technique on biobank material. In this article, we discuss the use of cryopreserved peripheral blood mononuclear cells (PBMCs), buffy coat (BC), and whole blood (WB) for analysis of DNA damage and repair using the comet assay. The published literature and the authors' experiences indicate that various types of blood samples can be cryopreserved with only a minor effect on the basal level of DNA damage. There is evidence to suggest that WB and PBMCs can be cryopreserved for several years without much effect on the level of DNA damage. However, care should be taken when cryopreserving WB and BCs. It is possible to use either fresh or frozen samples of blood cells, but results from fresh and frozen cells should not be used in the same dataset. The article outlines detailed protocols for the cryopreservation of PBMCs, BCs, and WB samples.Oxford AcademicRCIPLMøller, PeterBankoglu, Ezgi EyluelStopper, HelgaGiovannelli, LisaLadeira, CarinaKoppen, GudrunGajski, GoranCollins, AndrewValdiglesias, VanessaLaffon, BlancaBoutet-Robinet, ElisaPerdry, HervéDel Bo’, CristianLangie, Sabine A SDusinska, MariaAzqueta, Amaya2021-052021-05-01T00:00:00Z2024-08-05T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/13625engMøller P, Bankoglu EE, Stopper H, Giovannelli L, Ladeira C, Koppen G, et al. Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies. Mutagenesis. 2021;36(3):193-212.10.1093/mutage/geab012info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-03T10:08:39Zoai:repositorio.ipl.pt:10400.21/13625Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:21:31.993081Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
title Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
spellingShingle Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
Møller, Peter
Comet assay
Cryopreservation
DNA
DNA damage
Epidemiology
Molecular
Leucocytes
Whole blood
title_short Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
title_full Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
title_fullStr Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
title_full_unstemmed Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
title_sort Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies
author Møller, Peter
author_facet Møller, Peter
Bankoglu, Ezgi Eyluel
Stopper, Helga
Giovannelli, Lisa
Ladeira, Carina
Koppen, Gudrun
Gajski, Goran
Collins, Andrew
Valdiglesias, Vanessa
Laffon, Blanca
Boutet-Robinet, Elisa
Perdry, Hervé
Del Bo’, Cristian
Langie, Sabine A S
Dusinska, Maria
Azqueta, Amaya
author_role author
author2 Bankoglu, Ezgi Eyluel
Stopper, Helga
Giovannelli, Lisa
Ladeira, Carina
Koppen, Gudrun
Gajski, Goran
Collins, Andrew
Valdiglesias, Vanessa
Laffon, Blanca
Boutet-Robinet, Elisa
Perdry, Hervé
Del Bo’, Cristian
Langie, Sabine A S
Dusinska, Maria
Azqueta, Amaya
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv RCIPL
dc.contributor.author.fl_str_mv Møller, Peter
Bankoglu, Ezgi Eyluel
Stopper, Helga
Giovannelli, Lisa
Ladeira, Carina
Koppen, Gudrun
Gajski, Goran
Collins, Andrew
Valdiglesias, Vanessa
Laffon, Blanca
Boutet-Robinet, Elisa
Perdry, Hervé
Del Bo’, Cristian
Langie, Sabine A S
Dusinska, Maria
Azqueta, Amaya
dc.subject.por.fl_str_mv Comet assay
Cryopreservation
DNA
DNA damage
Epidemiology
Molecular
Leucocytes
Whole blood
topic Comet assay
Cryopreservation
DNA
DNA damage
Epidemiology
Molecular
Leucocytes
Whole blood
description DNA damage and repair activity are often assessed in blood samples from humans in different types of molecular epidemiology studies. However, it is not always feasible to analyze the samples on the day of collection without any type of storage. For instance, certain studies use repeated sampling of cells from the same subject or samples from different subjects collected at different time points, and it is desirable to analyze all these samples in the same comet assay experiment. In addition, flawless comet assay analyses on frozen samples open up the possibility of using this technique on biobank material. In this article, we discuss the use of cryopreserved peripheral blood mononuclear cells (PBMCs), buffy coat (BC), and whole blood (WB) for analysis of DNA damage and repair using the comet assay. The published literature and the authors' experiences indicate that various types of blood samples can be cryopreserved with only a minor effect on the basal level of DNA damage. There is evidence to suggest that WB and PBMCs can be cryopreserved for several years without much effect on the level of DNA damage. However, care should be taken when cryopreserving WB and BCs. It is possible to use either fresh or frozen samples of blood cells, but results from fresh and frozen cells should not be used in the same dataset. The article outlines detailed protocols for the cryopreservation of PBMCs, BCs, and WB samples.
publishDate 2021
dc.date.none.fl_str_mv 2021-05
2021-05-01T00:00:00Z
2024-08-05T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.21/13625
url http://hdl.handle.net/10400.21/13625
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Møller P, Bankoglu EE, Stopper H, Giovannelli L, Ladeira C, Koppen G, et al. Collection and storage of human white blood cells for analysis of DNA damage and repair activity using the comet assay in molecular epidemiology studies. Mutagenesis. 2021;36(3):193-212.
10.1093/mutage/geab012
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Oxford Academic
publisher.none.fl_str_mv Oxford Academic
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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