Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands

Detalhes bibliográficos
Autor(a) principal: Emerson, Brent C.
Data de Publicação: 2023
Outros Autores: Borges, Paulo A. V., Cardoso, Pedro, Convey, Peter, deWaard, Jeremy R., Economo, Evan P., Gillespie, Rosemary G., Kennedy, Susan, Krehenwinkel, Henrik, Meier, Rudolf, Roderick, George K., Strasberg, Dominique, Thébaud, Christophe, Traveset, Anna, Creedy, Thomas J., Meramveliotakis, Emmanouil, Noguerales, Víctor, Overcast, Isaac, Morlon, Hélène, Papadopoulou, Anna, Vogler, Alfried P., Arribas, Paula, Andújar, Carmelo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.3/6899
Resumo: ABSTRACT: Current understanding of ecological and evolutionary processes underlying island biodiversity is heavily shaped by empirical data from plants and birds, although arthropods comprise the overwhelming majority of known animal species, and as such can provide key insights into processes governing biodiversity. Novel high throughput sequencing (HTS) approaches are now emerging as powerful tools to overcome limitations in the availability of arthropod biodiversity data, and hence provide insights into these processes. Here, we explored how these tools might be most effectively exploited for comprehensive and comparable inventory and monitoring of insular arthropod biodiversity. We first reviewed the strengths, limitations and potential synergies among existing approaches of high throughput barcode sequencing. We considered how this could be complemented with deep learning approaches applied to image analysis to study arthropod biodiversity. We then explored how these approaches could be implemented within the framework of an island Genomic Observatories Network (iGON) for the advancement of fundamental and applied understanding of island biodiversity. To this end, we identified seven island biology themes at the interface of ecology, evolution and conservation biology, within which collective and harmonized efforts in HTS arthropod inventory could yield significant advances in island biodiversity research.
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spelling Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islandsArthropodsBiodiversity ConservationIsland EvolutionIsland BiodiversityABSTRACT: Current understanding of ecological and evolutionary processes underlying island biodiversity is heavily shaped by empirical data from plants and birds, although arthropods comprise the overwhelming majority of known animal species, and as such can provide key insights into processes governing biodiversity. Novel high throughput sequencing (HTS) approaches are now emerging as powerful tools to overcome limitations in the availability of arthropod biodiversity data, and hence provide insights into these processes. Here, we explored how these tools might be most effectively exploited for comprehensive and comparable inventory and monitoring of insular arthropod biodiversity. We first reviewed the strengths, limitations and potential synergies among existing approaches of high throughput barcode sequencing. We considered how this could be complemented with deep learning approaches applied to image analysis to study arthropod biodiversity. We then explored how these approaches could be implemented within the framework of an island Genomic Observatories Network (iGON) for the advancement of fundamental and applied understanding of island biodiversity. To this end, we identified seven island biology themes at the interface of ecology, evolution and conservation biology, within which collective and harmonized efforts in HTS arthropod inventory could yield significant advances in island biodiversity research.WileyRepositório da Universidade dos AçoresEmerson, Brent C.Borges, Paulo A. V.Cardoso, PedroConvey, PeterdeWaard, Jeremy R.Economo, Evan P.Gillespie, Rosemary G.Kennedy, SusanKrehenwinkel, HenrikMeier, RudolfRoderick, George K.Strasberg, DominiqueThébaud, ChristopheTraveset, AnnaCreedy, Thomas J.Meramveliotakis, EmmanouilNoguerales, VíctorOvercast, IsaacMorlon, HélènePapadopoulou, AnnaVogler, Alfried P.Arribas, PaulaAndújar, Carmelo2024-01-24T14:36:03Z20232023-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.3/6899engEmerson, B., Borges, P. A. V., Cardoso, P., Convey, P., deWarrd, J. R., Economo, E. P, Gillespie, R. G., Kennedy, S., Krehenwinkel, H., Meier, R., Roderick, G. K., Strasberg, D., Thébaud, C., Traveset, A, Creedy, T. J., Meramveliotakis, E., Noguerales, V., Overcast, I., Morlon, H., Papadopoulou, A., Vogler, A. P., Arribas, P., & Andújar, C. (2023). Collective and harmonised high throughput barcoding of insular arthropod biodiversity: toward a Genomic Observatories Network for islands. "Molecular Ecology", 32, 6161-6176. DOI:10.1111/mec.166830692-108310.1111/mec.166831365-294Xinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-27T02:00:47Zoai:repositorio.uac.pt:10400.3/6899Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:58:02.276110Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
title Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
spellingShingle Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
Emerson, Brent C.
Arthropods
Biodiversity Conservation
Island Evolution
Island Biodiversity
title_short Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
title_full Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
title_fullStr Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
title_full_unstemmed Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
title_sort Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands
author Emerson, Brent C.
author_facet Emerson, Brent C.
Borges, Paulo A. V.
Cardoso, Pedro
Convey, Peter
deWaard, Jeremy R.
Economo, Evan P.
Gillespie, Rosemary G.
Kennedy, Susan
Krehenwinkel, Henrik
Meier, Rudolf
Roderick, George K.
Strasberg, Dominique
Thébaud, Christophe
Traveset, Anna
Creedy, Thomas J.
Meramveliotakis, Emmanouil
Noguerales, Víctor
Overcast, Isaac
Morlon, Hélène
Papadopoulou, Anna
Vogler, Alfried P.
Arribas, Paula
Andújar, Carmelo
author_role author
author2 Borges, Paulo A. V.
Cardoso, Pedro
Convey, Peter
deWaard, Jeremy R.
Economo, Evan P.
Gillespie, Rosemary G.
Kennedy, Susan
Krehenwinkel, Henrik
Meier, Rudolf
Roderick, George K.
Strasberg, Dominique
Thébaud, Christophe
Traveset, Anna
Creedy, Thomas J.
Meramveliotakis, Emmanouil
Noguerales, Víctor
Overcast, Isaac
Morlon, Hélène
Papadopoulou, Anna
Vogler, Alfried P.
Arribas, Paula
Andújar, Carmelo
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório da Universidade dos Açores
dc.contributor.author.fl_str_mv Emerson, Brent C.
Borges, Paulo A. V.
Cardoso, Pedro
Convey, Peter
deWaard, Jeremy R.
Economo, Evan P.
Gillespie, Rosemary G.
Kennedy, Susan
Krehenwinkel, Henrik
Meier, Rudolf
Roderick, George K.
Strasberg, Dominique
Thébaud, Christophe
Traveset, Anna
Creedy, Thomas J.
Meramveliotakis, Emmanouil
Noguerales, Víctor
Overcast, Isaac
Morlon, Hélène
Papadopoulou, Anna
Vogler, Alfried P.
Arribas, Paula
Andújar, Carmelo
dc.subject.por.fl_str_mv Arthropods
Biodiversity Conservation
Island Evolution
Island Biodiversity
topic Arthropods
Biodiversity Conservation
Island Evolution
Island Biodiversity
description ABSTRACT: Current understanding of ecological and evolutionary processes underlying island biodiversity is heavily shaped by empirical data from plants and birds, although arthropods comprise the overwhelming majority of known animal species, and as such can provide key insights into processes governing biodiversity. Novel high throughput sequencing (HTS) approaches are now emerging as powerful tools to overcome limitations in the availability of arthropod biodiversity data, and hence provide insights into these processes. Here, we explored how these tools might be most effectively exploited for comprehensive and comparable inventory and monitoring of insular arthropod biodiversity. We first reviewed the strengths, limitations and potential synergies among existing approaches of high throughput barcode sequencing. We considered how this could be complemented with deep learning approaches applied to image analysis to study arthropod biodiversity. We then explored how these approaches could be implemented within the framework of an island Genomic Observatories Network (iGON) for the advancement of fundamental and applied understanding of island biodiversity. To this end, we identified seven island biology themes at the interface of ecology, evolution and conservation biology, within which collective and harmonized efforts in HTS arthropod inventory could yield significant advances in island biodiversity research.
publishDate 2023
dc.date.none.fl_str_mv 2023
2023-01-01T00:00:00Z
2024-01-24T14:36:03Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.3/6899
url http://hdl.handle.net/10400.3/6899
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Emerson, B., Borges, P. A. V., Cardoso, P., Convey, P., deWarrd, J. R., Economo, E. P, Gillespie, R. G., Kennedy, S., Krehenwinkel, H., Meier, R., Roderick, G. K., Strasberg, D., Thébaud, C., Traveset, A, Creedy, T. J., Meramveliotakis, E., Noguerales, V., Overcast, I., Morlon, H., Papadopoulou, A., Vogler, A. P., Arribas, P., & Andújar, C. (2023). Collective and harmonised high throughput barcoding of insular arthropod biodiversity: toward a Genomic Observatories Network for islands. "Molecular Ecology", 32, 6161-6176. DOI:10.1111/mec.16683
0692-1083
10.1111/mec.16683
1365-294X
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
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