Identification of miRSNPs associated with the risk of multiple myeloma
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2017 |
| Outros Autores: | , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
| Texto Completo: | http://hdl.handle.net/1822/50171 |
Resumo: | Accepted article |
| id |
RCAP_68ab6f1a282e1981413a3b8d1382f503 |
|---|---|
| oai_identifier_str |
oai:repositorium.sdum.uminho.pt:1822/50171 |
| network_acronym_str |
RCAP |
| network_name_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
| repository_id_str |
7160 |
| spelling |
Identification of miRSNPs associated with the risk of multiple myelomaMultiple MyelomamiRNASNPGenetic susceptibilityCiências Médicas::Medicina BásicaScience & TechnologyAccepted articleMultiple myeloma (MM) is a malignancy of plasma cells usually infiltrating the bone marrow, associated with the production of a monoclonal immunoglobulin (M protein) which can be detected in the blood and/or urine. Multiple lines of evidence suggest that genetic factors are involved in MM pathogenesis, and several studies have identified single nucleotide polymorphisms (SNPs) associated with the susceptibility to the disease. SNPs within miRNA-binding sites in target genes (miRSNPs) may alter the strength of miRNA-mRNA interactions, thus deregulating protein expression. MiRSNPs are known to be associated with risk of various types of cancer, but they have never been investigated in MM. We performed an in silico genome-wide search for miRSNPs predicted to alter binding of miRNAs to their target sequences. We selected 12 miRSNPs and tested their association with MM risk. Our study population consisted of 1,832 controls and 2,894 MM cases recruited from seven European countries and Israel in the context of the IMMEnSE (International Multiple Myeloma rESEarch) consortium. In this population two SNPs showed an association with p<0.05: rs286595 (located in gene MRLP22) and rs14191881 (located in gene TCF19). Results from IMMEnSE were meta-analyzed with data from a previously published genome-wide association study (GWAS). The SNPs rs13409 (located in the 3UTR of the POU5F1 gene), rs1419881 (TCF19), rs1049633, rs1049623 (both in DDR1) showed significant associations with MM risk. In conclusion, we sought to identify genetic polymorphisms associated with MM risk starting from genome-wide prediction of miRSNPs. For some mirSNPs, we have shown promising associations with MM risk. What's new? Even though deregulation of miRNA expression has been associated with human cancers little information is available regarding their relation with MM susceptibility. We performed an in silico genome-wide search for miRSNPs and selected the most promising ones for an association study. The SNPs with the strongest associations with MM risk are localized in genes which have never been related with MM.This work was partially funded by: intramural funds of German Cancer Research Center (DKFZ), Grant ref. HUS412A1271 from the “Gerencia Regional de Salud de la Junta de Castilla y Léon”. This work was supported by grants from the Instituto de Salud Carlos III (Madrid, Spain; PI12/02688). Catalan Government DURSI grant 2014SGR647 and Instituto de Salud Carlos III, co7funded by FEDER funds –a way to build Europe– grants PI11701439 and PIE13/00022info:eu-repo/semantics/publishedVersionWileyUniversidade do MinhoMacauda, AngelicaCalvetti, DiegoMaccari, GiuseppeHemminki, KariFörsti, AstaGoldschmidt, HartmutWeinhold, NielsHoulston, RichardMarques, HerlanderReis, R. M.et. al.2017-02-092017-02-09T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/50171engMacauda, A., Goldschmidt, H., et. al. (2017). Identification of miRSNPs associated with the risk of multiple myeloma. International journal of cancer, 140(3), 526-5340020-713610.1002/ijc.3046527718532http://onlinelibrary.wiley.com/doi/10.1002/ijc.30465/fullinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:19:30Zoai:repositorium.sdum.uminho.pt:1822/50171Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:12:27.330976Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
| dc.title.none.fl_str_mv |
Identification of miRSNPs associated with the risk of multiple myeloma |
| title |
Identification of miRSNPs associated with the risk of multiple myeloma |
| spellingShingle |
Identification of miRSNPs associated with the risk of multiple myeloma Macauda, Angelica Multiple Myeloma miRNA SNP Genetic susceptibility Ciências Médicas::Medicina Básica Science & Technology |
| title_short |
Identification of miRSNPs associated with the risk of multiple myeloma |
| title_full |
Identification of miRSNPs associated with the risk of multiple myeloma |
| title_fullStr |
Identification of miRSNPs associated with the risk of multiple myeloma |
| title_full_unstemmed |
Identification of miRSNPs associated with the risk of multiple myeloma |
| title_sort |
Identification of miRSNPs associated with the risk of multiple myeloma |
| author |
Macauda, Angelica |
| author_facet |
Macauda, Angelica Calvetti, Diego Maccari, Giuseppe Hemminki, Kari Försti, Asta Goldschmidt, Hartmut Weinhold, Niels Houlston, Richard Marques, Herlander Reis, R. M. et. al. |
| author_role |
author |
| author2 |
Calvetti, Diego Maccari, Giuseppe Hemminki, Kari Försti, Asta Goldschmidt, Hartmut Weinhold, Niels Houlston, Richard Marques, Herlander Reis, R. M. et. al. |
| author2_role |
author author author author author author author author author author |
| dc.contributor.none.fl_str_mv |
Universidade do Minho |
| dc.contributor.author.fl_str_mv |
Macauda, Angelica Calvetti, Diego Maccari, Giuseppe Hemminki, Kari Försti, Asta Goldschmidt, Hartmut Weinhold, Niels Houlston, Richard Marques, Herlander Reis, R. M. et. al. |
| dc.subject.por.fl_str_mv |
Multiple Myeloma miRNA SNP Genetic susceptibility Ciências Médicas::Medicina Básica Science & Technology |
| topic |
Multiple Myeloma miRNA SNP Genetic susceptibility Ciências Médicas::Medicina Básica Science & Technology |
| description |
Accepted article |
| publishDate |
2017 |
| dc.date.none.fl_str_mv |
2017-02-09 2017-02-09T00:00:00Z |
| dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| status_str |
publishedVersion |
| dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/50171 |
| url |
http://hdl.handle.net/1822/50171 |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
| dc.relation.none.fl_str_mv |
Macauda, A., Goldschmidt, H., et. al. (2017). Identification of miRSNPs associated with the risk of multiple myeloma. International journal of cancer, 140(3), 526-534 0020-7136 10.1002/ijc.30465 27718532 http://onlinelibrary.wiley.com/doi/10.1002/ijc.30465/full |
| dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
| eu_rights_str_mv |
openAccess |
| dc.format.none.fl_str_mv |
application/pdf |
| dc.publisher.none.fl_str_mv |
Wiley |
| publisher.none.fl_str_mv |
Wiley |
| dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
| instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
| instacron_str |
RCAAP |
| institution |
RCAAP |
| reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
| collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
| repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
| repository.mail.fl_str_mv |
|
| _version_ |
1799132559814164480 |