miRNAs detection for non-small cell lung cancer diagnosis

Detalhes bibliográficos
Autor(a) principal: Teixeira, Bernardo Ferreira Pires
Data de Publicação: 2021
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.6/11653
Resumo: Lung cancer is one of the most severe and prevalent cancers worldwide. Last year, it was responsible for around two million new cases, and represented the leading cancer regarding mortality. Lung cancer subtype non-small cell lung cancer (NSCLC) constitutes the majority of total lung cancer cases, getting generally diagnosed in advanced stages. Current NSCLC diagnosis approaches lack of sensitivity and specificity. Moreover, most accurate NSCLC diagnosis comprises risky patient-invasive procedures like biopsies. The forward-looking demand for new innovative NSCLC diagnosis approaches that could reinforce ongoing procedures is crucial for an even more precise NSCLC staging and early diagnosis. Recently, new molecular biomarkers are emerging as potential non-invasive diagnostic agents for early-stage NSCLC screening, including multiple miRNAs that display an unusual expression profile in NSCLC. Furthermore, plasma and peripheral blood mononuclear cells (PBMCs) miRNA profile could relate to NSCLC diagnosis. Molecular beacons (MBs) are oligonucleotide probes with a stem-loop structural configuration capable of detect specific nucleic acid sequences throughout fluorescence. The following work studied the development of an in situ MB-based strategy for miRNA detection in NSCLC biological samples. Initially, plasma and PBMCs were isolated from whole blood samples from NSCLC and healthy individuals. miRNA expression profile was screened in PBMCs by RT-qPCR analysis, and further MBs were designed targeting selected miRNAs. Obtained results revealed an upregulated expression of miR-21-3p, miR-21-5p, miR-155-3p and miR-3662 in NSCLC PBMCs, whereas levels of miR-92b-5p, miR-150-3p, miR-155-5p and miR-181a-5p were reduced. Therefore, an in situ method involving miR-21 detection in PBMCs via MBs was shaped and optimized. Accomplished results demonstrated the developed MB approach potential towards miR-21 detection in PBMCs for NSCLC diagnosis.
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spelling miRNAs detection for non-small cell lung cancer diagnosisCancro do Pulmão de Não-Pequenas CélulasCélulas Mononucleares do Sangue PeriférioDeteção In SituDiagnósticoMicrornasSondas MolecularesDomínio/Área Científica::Engenharia e Tecnologia::BiotecnologiaLung cancer is one of the most severe and prevalent cancers worldwide. Last year, it was responsible for around two million new cases, and represented the leading cancer regarding mortality. Lung cancer subtype non-small cell lung cancer (NSCLC) constitutes the majority of total lung cancer cases, getting generally diagnosed in advanced stages. Current NSCLC diagnosis approaches lack of sensitivity and specificity. Moreover, most accurate NSCLC diagnosis comprises risky patient-invasive procedures like biopsies. The forward-looking demand for new innovative NSCLC diagnosis approaches that could reinforce ongoing procedures is crucial for an even more precise NSCLC staging and early diagnosis. Recently, new molecular biomarkers are emerging as potential non-invasive diagnostic agents for early-stage NSCLC screening, including multiple miRNAs that display an unusual expression profile in NSCLC. Furthermore, plasma and peripheral blood mononuclear cells (PBMCs) miRNA profile could relate to NSCLC diagnosis. Molecular beacons (MBs) are oligonucleotide probes with a stem-loop structural configuration capable of detect specific nucleic acid sequences throughout fluorescence. The following work studied the development of an in situ MB-based strategy for miRNA detection in NSCLC biological samples. Initially, plasma and PBMCs were isolated from whole blood samples from NSCLC and healthy individuals. miRNA expression profile was screened in PBMCs by RT-qPCR analysis, and further MBs were designed targeting selected miRNAs. Obtained results revealed an upregulated expression of miR-21-3p, miR-21-5p, miR-155-3p and miR-3662 in NSCLC PBMCs, whereas levels of miR-92b-5p, miR-150-3p, miR-155-5p and miR-181a-5p were reduced. Therefore, an in situ method involving miR-21 detection in PBMCs via MBs was shaped and optimized. Accomplished results demonstrated the developed MB approach potential towards miR-21 detection in PBMCs for NSCLC diagnosis.O cancro do pulmão é considerado um dos mais severos e prevalentes a nível mundial. Em 2020 foi responsável por cerca de dois milhões de novos casos, assim como teve a mais elevada taxa de mortalidade. O cancro do pulmão de não-pequenas células (CPNPC) é o subtipo de cancro do pulmão mais comum, sendo geralmente diagnosticado em estadios avançados. A procura por novas metodologias para o diagnóstico do CPNPC que possam reforçar os procedimentos já praticados é crucial para um diagnóstico precoce e caraterização mais precisa do cancro. Recentemente, novos biomarcadores moleculares estão a surgir como potenciais alvos para o diagnóstico precoce e não-invasivo do CPNPC, nos quais se enquadram múltiplos microRNAs (miRNAs) com expressão alterada. Adicionalmente, o perfil de expressão de miRNAs em plasma e células mononucleares do sangue periférico está conectado com o diagnóstico e estadio do CPNPC. Sondas moleculares são sequências de oligonucleótidos com uma configuração estrutural em stem-loop que lhes permite detetar sequências específicas de ácidos nucleicos através de um sinal fluorescente. O trabalho apresentado estudou o desenvolvimento de uma abordagem in situ baseada em sondas moleculares para a deteção de miRNAs em amostras biológicas para o diagnóstico do CPNPC. O perfil de expressão de miRNAs foi analisado em células mononucleares do sangue periférico através da técnica de RT-qPCR, e posteriormente foram desenhadas sondas moleculares direcionadas para os miRNAs selecionados. Os resultados obtidos mostraram um perfil sob expresso para o microRNA 21-3p (miR-21-3p), miR-21-5p, miR-155-3p e miR-3662 em células mononucleares do sangue periférico de CPNPC, nas quais o miR-92b-5p, miR-150-3p, miR155-3p e o miR-181a-5p apresentaram uma expressão reduzida relativamente aos controlos. Consequentemente, uma abordagem in situ envolvendo sondas moleculares foi desenvolvida, a qual mostrou potencial para a deteção do miR-21 em RNA total de células mononucleares do sangue periférico para o diagnóstico de CPNPC.Cruz, Carla Patrícia Alves Freire MadeirauBibliorumTeixeira, Bernardo Ferreira Pires2022-01-11T17:20:21Z2021-11-172021-10-112021-11-17T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10400.6/11653TID:202839117enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-12-15T09:54:18Zoai:ubibliorum.ubi.pt:10400.6/11653Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T00:51:23.423077Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv miRNAs detection for non-small cell lung cancer diagnosis
title miRNAs detection for non-small cell lung cancer diagnosis
spellingShingle miRNAs detection for non-small cell lung cancer diagnosis
Teixeira, Bernardo Ferreira Pires
Cancro do Pulmão de Não-Pequenas Células
Células Mononucleares do Sangue Perifério
Deteção In Situ
Diagnóstico
Micrornas
Sondas Moleculares
Domínio/Área Científica::Engenharia e Tecnologia::Biotecnologia
title_short miRNAs detection for non-small cell lung cancer diagnosis
title_full miRNAs detection for non-small cell lung cancer diagnosis
title_fullStr miRNAs detection for non-small cell lung cancer diagnosis
title_full_unstemmed miRNAs detection for non-small cell lung cancer diagnosis
title_sort miRNAs detection for non-small cell lung cancer diagnosis
author Teixeira, Bernardo Ferreira Pires
author_facet Teixeira, Bernardo Ferreira Pires
author_role author
dc.contributor.none.fl_str_mv Cruz, Carla Patrícia Alves Freire Madeira
uBibliorum
dc.contributor.author.fl_str_mv Teixeira, Bernardo Ferreira Pires
dc.subject.por.fl_str_mv Cancro do Pulmão de Não-Pequenas Células
Células Mononucleares do Sangue Perifério
Deteção In Situ
Diagnóstico
Micrornas
Sondas Moleculares
Domínio/Área Científica::Engenharia e Tecnologia::Biotecnologia
topic Cancro do Pulmão de Não-Pequenas Células
Células Mononucleares do Sangue Perifério
Deteção In Situ
Diagnóstico
Micrornas
Sondas Moleculares
Domínio/Área Científica::Engenharia e Tecnologia::Biotecnologia
description Lung cancer is one of the most severe and prevalent cancers worldwide. Last year, it was responsible for around two million new cases, and represented the leading cancer regarding mortality. Lung cancer subtype non-small cell lung cancer (NSCLC) constitutes the majority of total lung cancer cases, getting generally diagnosed in advanced stages. Current NSCLC diagnosis approaches lack of sensitivity and specificity. Moreover, most accurate NSCLC diagnosis comprises risky patient-invasive procedures like biopsies. The forward-looking demand for new innovative NSCLC diagnosis approaches that could reinforce ongoing procedures is crucial for an even more precise NSCLC staging and early diagnosis. Recently, new molecular biomarkers are emerging as potential non-invasive diagnostic agents for early-stage NSCLC screening, including multiple miRNAs that display an unusual expression profile in NSCLC. Furthermore, plasma and peripheral blood mononuclear cells (PBMCs) miRNA profile could relate to NSCLC diagnosis. Molecular beacons (MBs) are oligonucleotide probes with a stem-loop structural configuration capable of detect specific nucleic acid sequences throughout fluorescence. The following work studied the development of an in situ MB-based strategy for miRNA detection in NSCLC biological samples. Initially, plasma and PBMCs were isolated from whole blood samples from NSCLC and healthy individuals. miRNA expression profile was screened in PBMCs by RT-qPCR analysis, and further MBs were designed targeting selected miRNAs. Obtained results revealed an upregulated expression of miR-21-3p, miR-21-5p, miR-155-3p and miR-3662 in NSCLC PBMCs, whereas levels of miR-92b-5p, miR-150-3p, miR-155-5p and miR-181a-5p were reduced. Therefore, an in situ method involving miR-21 detection in PBMCs via MBs was shaped and optimized. Accomplished results demonstrated the developed MB approach potential towards miR-21 detection in PBMCs for NSCLC diagnosis.
publishDate 2021
dc.date.none.fl_str_mv 2021-11-17
2021-10-11
2021-11-17T00:00:00Z
2022-01-11T17:20:21Z
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TID:202839117
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