Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques

Detalhes bibliográficos
Autor(a) principal: Ginoris, Y. P.
Data de Publicação: 2007
Outros Autores: Amaral, A. L., Nicolau, Ana, Coelho, M. A. Z., Ferreira, Eugénio C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/6947
Resumo: Different protozoa and metazoa populations develop in the activated sludge wastewater treatment processes and are highly dependent on the operating conditions. In the current work the protozoa and metazoa groups and species most frequent in wastewater treatment plants were studied, mainly the flagellate, sarcodine, and ciliate protozoa as well as the rotifer, gastrotrichia, and oligotrichia metazoa. The work is centered on the survey of the wastewater treatment plant conditions by protozoa and metazoa population using image analysis, discriminant analysis (DA), and neural networks (NNs) techniques, and its main objective was set on the evaluation of the importance of raw data pre-processing techniques in the final results. The main pre-processing techniques herein studied were the raw parameters reduction set by a joint cross-correlation and decision trees (DTs) procedure and two data normalization techniques: logarithmic normalization and standard deviation normalization. Regarding the parameters reduction methodology, the use of a joint DTs and correlation analysis (CA) procedure resulted in 28 and 30% reductions in terms of the initial parameters set for the stalked and non-stalked microorganisms, respectively. Consequently, the use of the reduced parameters set has proven to be a suitable starting point for both the DA and NNs methodologies, although for the DA an initial logarithmic normalization step is advisable. For the NNs analysis a standard deviation normalization procedure could be considered for the non-stalked microorganisms regarding the operating parameters assessment.
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spelling Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniquesProtozoaMetazoaImage analysisPattern recognitionScience & TechnologyDifferent protozoa and metazoa populations develop in the activated sludge wastewater treatment processes and are highly dependent on the operating conditions. In the current work the protozoa and metazoa groups and species most frequent in wastewater treatment plants were studied, mainly the flagellate, sarcodine, and ciliate protozoa as well as the rotifer, gastrotrichia, and oligotrichia metazoa. The work is centered on the survey of the wastewater treatment plant conditions by protozoa and metazoa population using image analysis, discriminant analysis (DA), and neural networks (NNs) techniques, and its main objective was set on the evaluation of the importance of raw data pre-processing techniques in the final results. The main pre-processing techniques herein studied were the raw parameters reduction set by a joint cross-correlation and decision trees (DTs) procedure and two data normalization techniques: logarithmic normalization and standard deviation normalization. Regarding the parameters reduction methodology, the use of a joint DTs and correlation analysis (CA) procedure resulted in 28 and 30% reductions in terms of the initial parameters set for the stalked and non-stalked microorganisms, respectively. Consequently, the use of the reduced parameters set has proven to be a suitable starting point for both the DA and NNs methodologies, although for the DA an initial logarithmic normalization step is advisable. For the NNs analysis a standard deviation normalization procedure could be considered for the non-stalked microorganisms regarding the operating parameters assessment.The authors are grateful to the National Council of Scientific and Technological Development of Brazil (CNPq), the BI-EURAM III ALFA co-operation project (European Commission), and the POCI/AMB/57069/2004 project supported by the Fundação para a Ciência e a Tecnologia (Portugal). Data from Nancy plant made available by Prof. Maurício da Motta (UFPE, Recife, Brasil) is also acknowledged.John Wiley and SonsUniversidade do MinhoGinoris, Y. P.Amaral, A. L.Nicolau, AnaCoelho, M. A. Z.Ferreira, Eugénio C.20072007-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/6947engGinoris, Y. P., Amaral, A. L., Nicolau, A., Coelho, M. A. Z., & Ferreira, E. C. (2007). Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques. Journal of Chemometrics. Wiley. http://doi.org/10.1002/cem.10540886-938310.1002/cem.1054info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:54:34Zoai:repositorium.sdum.uminho.pt:1822/6947Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:54:09.192518Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
title Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
spellingShingle Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
Ginoris, Y. P.
Protozoa
Metazoa
Image analysis
Pattern recognition
Science & Technology
title_short Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
title_full Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
title_fullStr Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
title_full_unstemmed Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
title_sort Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
author Ginoris, Y. P.
author_facet Ginoris, Y. P.
Amaral, A. L.
Nicolau, Ana
Coelho, M. A. Z.
Ferreira, Eugénio C.
author_role author
author2 Amaral, A. L.
Nicolau, Ana
Coelho, M. A. Z.
Ferreira, Eugénio C.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Ginoris, Y. P.
Amaral, A. L.
Nicolau, Ana
Coelho, M. A. Z.
Ferreira, Eugénio C.
dc.subject.por.fl_str_mv Protozoa
Metazoa
Image analysis
Pattern recognition
Science & Technology
topic Protozoa
Metazoa
Image analysis
Pattern recognition
Science & Technology
description Different protozoa and metazoa populations develop in the activated sludge wastewater treatment processes and are highly dependent on the operating conditions. In the current work the protozoa and metazoa groups and species most frequent in wastewater treatment plants were studied, mainly the flagellate, sarcodine, and ciliate protozoa as well as the rotifer, gastrotrichia, and oligotrichia metazoa. The work is centered on the survey of the wastewater treatment plant conditions by protozoa and metazoa population using image analysis, discriminant analysis (DA), and neural networks (NNs) techniques, and its main objective was set on the evaluation of the importance of raw data pre-processing techniques in the final results. The main pre-processing techniques herein studied were the raw parameters reduction set by a joint cross-correlation and decision trees (DTs) procedure and two data normalization techniques: logarithmic normalization and standard deviation normalization. Regarding the parameters reduction methodology, the use of a joint DTs and correlation analysis (CA) procedure resulted in 28 and 30% reductions in terms of the initial parameters set for the stalked and non-stalked microorganisms, respectively. Consequently, the use of the reduced parameters set has proven to be a suitable starting point for both the DA and NNs methodologies, although for the DA an initial logarithmic normalization step is advisable. For the NNs analysis a standard deviation normalization procedure could be considered for the non-stalked microorganisms regarding the operating parameters assessment.
publishDate 2007
dc.date.none.fl_str_mv 2007
2007-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/6947
url https://hdl.handle.net/1822/6947
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Ginoris, Y. P., Amaral, A. L., Nicolau, A., Coelho, M. A. Z., & Ferreira, E. C. (2007). Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques. Journal of Chemometrics. Wiley. http://doi.org/10.1002/cem.1054
0886-9383
10.1002/cem.1054
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv John Wiley and Sons
publisher.none.fl_str_mv John Wiley and Sons
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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