Origin and spread of human mitochondrial DNA haplogroup U7

Detalhes bibliográficos
Autor(a) principal: Sahakyan, Hovhannes
Data de Publicação: 2017
Outros Autores: Hooshiar Kashani, Baharak, Tamang, Rakesh, Kushniarevich, Alena, Francis, Amirtharaj, Costa, Marta D., Pathak, Ajai Kumar, Khachatryan, Zaruhi, Sharma, Indu, van Oven, Mannis, Parik, Jüri, Hovhannisyan, Hrant, Metspalu, Ene, Pennarun, Erwan, Karmin, Monika, Tamm, Erika, Tambets, Kristiina, Bahmanimehr, Ardeshir, Reisberg, Tuuli, Reidla, Maere, Achilli, Alessandro, Olivieri, Anna, Gandini, Francesca, Perego, Ugo A., Al-Zahery, Nadia, Houshmand, Massoud, Sanati, Mohammad Hossein, Soares, Pedro, Rai, Ekta, Šarac, Jelena, Šarić, Tena, Sharma, Varun, Pereira, Luisa, Fernandes, Veronica, Černý, Viktor, Farjadian, Shirin, Singh, Deepankar Pratap, Azakli, Hülya, Üstek, Duran, Ekomasova Trofimova, Natalia, Kutuev, Ildus, Litvinov, Sergei, Bermisheva, Marina, Khusnutdinova, Elza K., Rai, Niraj, Singh, Manvendra, Singh, Vijay Kumar, Reddy, Alla G., Tolk, Helle-Viivi, Cvjetan, Svjetlana, Lauc, Lovorka Barac, Rudan, Pavao, Michalodimitrakis, Emmanuel N., Anagnou, Nicholas P., Pappa, Kalliopi I., Golubenko, Maria V., Orekhov, Vladimir, Borinskaya, Svetlana A., Kaldma, Katrin, Schauer, Monica A., Simionescu, Maya, Gusar, Vladislava, Grechanina, Elena, Govindaraj, Periyasamy, Voevoda, Mikhail, Damba, Larissa, Sharma, Swarkar, Singh, Lalji, Semino, Ornella, Behar, Doron M, Yepiskoposyan, Levon, Richards, Martin B., Metspalu, Mait, Kivisild, Toomas, Thangaraj, Kumarasamy, Endicott, Phillip, Chaubey, Gyaneshwer, Torroni, Antonio, Villems, Richard
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/63890
Resumo: Human mitochondrial DNA haplogroup U is among the initial maternal founders in Southwest Asia and Europe and one that best indicates matrilineal genetic continuity between late Pleistocene hunter-gatherer groups and present-day populations of Europe. While most haplogroup U subclades are older than 30 thousand years, the comparatively recent coalescence time of the extant variation of haplogroup U7 (~16-19 thousand years ago) suggests that its current distribution is the consequence of more recent dispersal events, despite its wide geographical range across Europe, the Near East and South Asia. Here we report 267 new U7 mitogenomes that - analysed alongside 100 published ones - enable us to discern at least two distinct temporal phases of dispersal, both of which most likely emanated from the Near East. The earlier one began prior to the Holocene (~11.5 thousand years ago) towards South Asia, while the later dispersal took place more recently towards Mediterranean Europe during the Neolithic (~8 thousand years ago). These findings imply that the carriers of haplogroup U7 spread to South Asia and Europe before the suggested Bronze Age expansion of Indo-European languages from the Pontic-Caspian Steppe region.
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spelling Origin and spread of human mitochondrial DNA haplogroup U7Bayes TheoremDNA, MitochondrialGeographyHaplotypesHumansMutationPhylogenyEvolution, MolecularScience & TechnologyHuman mitochondrial DNA haplogroup U is among the initial maternal founders in Southwest Asia and Europe and one that best indicates matrilineal genetic continuity between late Pleistocene hunter-gatherer groups and present-day populations of Europe. While most haplogroup U subclades are older than 30 thousand years, the comparatively recent coalescence time of the extant variation of haplogroup U7 (~16-19 thousand years ago) suggests that its current distribution is the consequence of more recent dispersal events, despite its wide geographical range across Europe, the Near East and South Asia. Here we report 267 new U7 mitogenomes that - analysed alongside 100 published ones - enable us to discern at least two distinct temporal phases of dispersal, both of which most likely emanated from the Near East. The earlier one began prior to the Holocene (~11.5 thousand years ago) towards South Asia, while the later dispersal took place more recently towards Mediterranean Europe during the Neolithic (~8 thousand years ago). These findings imply that the carriers of haplogroup U7 spread to South Asia and Europe before the suggested Bronze Age expansion of Indo-European languages from the Pontic-Caspian Steppe region.We thank all the DNA donors who participated in this study. This study was supported by Estonian Institutional Research grant IUT24-1 (to H.S., E.M., M.R., M.M., T.K., and R.V.); ERC Starting Investigator grant (FP7-261213) (to T.K.); EU European Regional Development Fund through the Centre of Excellence in Genomics to Estonian Biocentre; Estonian Research Council grant PUT1339 (to A.K.), PUT1217 (to Kr.T.) and PUT766 (to G.C.); the University of Pavia strategic theme "Towards a governance model for international migration: an interdisciplinary and diachronic perspective" (MIGRAT-IN-G); the Italian Ministry of Education, University and Research: Futuro in Ricerca 2012 (RBFR126B8I) (to A.A. and A.O.) and Progetti Ricerca Interesse Nazionale 2012 (to A.A., O.S., and A.T.); the Council of Scientific and Industrial Research, Government of India (GENESIS: BSC0121) and (BSC 0118) (to Ku.T.); S.S. and E.R. acknowledge the support of National geographic Society through Genographic Project Research Grant (6-13). R.T. and A.K.P. were supported by the European Social Fund's Doctoral Studies and Internationalisation Programme DoRa. M.B.R. received support from the Leverhulme Trust's Doctoral Scholarship programme, and F.G. from the University of Huddersfield's University Research Fund and Research Excellent Staff Scheme. P.S. was supported by the FCT Investigator Programme (IF/01641/2013).Nature ResearchUniversidade do MinhoSahakyan, HovhannesHooshiar Kashani, BaharakTamang, RakeshKushniarevich, AlenaFrancis, AmirtharajCosta, Marta D.Pathak, Ajai KumarKhachatryan, ZaruhiSharma, Induvan Oven, MannisParik, JüriHovhannisyan, HrantMetspalu, EnePennarun, ErwanKarmin, MonikaTamm, ErikaTambets, KristiinaBahmanimehr, ArdeshirReisberg, TuuliReidla, MaereAchilli, AlessandroOlivieri, AnnaGandini, FrancescaPerego, Ugo A.Al-Zahery, NadiaHoushmand, MassoudSanati, Mohammad HosseinSoares, PedroRai, EktaŠarac, JelenaŠarić, TenaSharma, VarunPereira, LuisaFernandes, VeronicaČerný, ViktorFarjadian, ShirinSingh, Deepankar PratapAzakli, HülyaÜstek, DuranEkomasova Trofimova, NataliaKutuev, IldusLitvinov, SergeiBermisheva, MarinaKhusnutdinova, Elza K.Rai, NirajSingh, ManvendraSingh, Vijay KumarReddy, Alla G.Tolk, Helle-ViiviCvjetan, SvjetlanaLauc, Lovorka BaracRudan, PavaoMichalodimitrakis, Emmanuel N.Anagnou, Nicholas P.Pappa, Kalliopi I.Golubenko, Maria V.Orekhov, VladimirBorinskaya, Svetlana A.Kaldma, KatrinSchauer, Monica A.Simionescu, MayaGusar, VladislavaGrechanina, ElenaGovindaraj, PeriyasamyVoevoda, MikhailDamba, LarissaSharma, SwarkarSingh, LaljiSemino, OrnellaBehar, Doron MYepiskoposyan, LevonRichards, Martin B.Metspalu, MaitKivisild, ToomasThangaraj, KumarasamyEndicott, PhillipChaubey, GyaneshwerTorroni, AntonioVillems, Richard20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/63890eng2045-23222045-232210.1038/srep4604428387361https://www.nature.com/articles/srep46044.pdfinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:03:31Zoai:repositorium.sdum.uminho.pt:1822/63890Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:53:39.605620Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Origin and spread of human mitochondrial DNA haplogroup U7
title Origin and spread of human mitochondrial DNA haplogroup U7
spellingShingle Origin and spread of human mitochondrial DNA haplogroup U7
Sahakyan, Hovhannes
Bayes Theorem
DNA, Mitochondrial
Geography
Haplotypes
Humans
Mutation
Phylogeny
Evolution, Molecular
Science & Technology
title_short Origin and spread of human mitochondrial DNA haplogroup U7
title_full Origin and spread of human mitochondrial DNA haplogroup U7
title_fullStr Origin and spread of human mitochondrial DNA haplogroup U7
title_full_unstemmed Origin and spread of human mitochondrial DNA haplogroup U7
title_sort Origin and spread of human mitochondrial DNA haplogroup U7
author Sahakyan, Hovhannes
author_facet Sahakyan, Hovhannes
Hooshiar Kashani, Baharak
Tamang, Rakesh
Kushniarevich, Alena
Francis, Amirtharaj
Costa, Marta D.
Pathak, Ajai Kumar
Khachatryan, Zaruhi
Sharma, Indu
van Oven, Mannis
Parik, Jüri
Hovhannisyan, Hrant
Metspalu, Ene
Pennarun, Erwan
Karmin, Monika
Tamm, Erika
Tambets, Kristiina
Bahmanimehr, Ardeshir
Reisberg, Tuuli
Reidla, Maere
Achilli, Alessandro
Olivieri, Anna
Gandini, Francesca
Perego, Ugo A.
Al-Zahery, Nadia
Houshmand, Massoud
Sanati, Mohammad Hossein
Soares, Pedro
Rai, Ekta
Šarac, Jelena
Šarić, Tena
Sharma, Varun
Pereira, Luisa
Fernandes, Veronica
Černý, Viktor
Farjadian, Shirin
Singh, Deepankar Pratap
Azakli, Hülya
Üstek, Duran
Ekomasova Trofimova, Natalia
Kutuev, Ildus
Litvinov, Sergei
Bermisheva, Marina
Khusnutdinova, Elza K.
Rai, Niraj
Singh, Manvendra
Singh, Vijay Kumar
Reddy, Alla G.
Tolk, Helle-Viivi
Cvjetan, Svjetlana
Lauc, Lovorka Barac
Rudan, Pavao
Michalodimitrakis, Emmanuel N.
Anagnou, Nicholas P.
Pappa, Kalliopi I.
Golubenko, Maria V.
Orekhov, Vladimir
Borinskaya, Svetlana A.
Kaldma, Katrin
Schauer, Monica A.
Simionescu, Maya
Gusar, Vladislava
Grechanina, Elena
Govindaraj, Periyasamy
Voevoda, Mikhail
Damba, Larissa
Sharma, Swarkar
Singh, Lalji
Semino, Ornella
Behar, Doron M
Yepiskoposyan, Levon
Richards, Martin B.
Metspalu, Mait
Kivisild, Toomas
Thangaraj, Kumarasamy
Endicott, Phillip
Chaubey, Gyaneshwer
Torroni, Antonio
Villems, Richard
author_role author
author2 Hooshiar Kashani, Baharak
Tamang, Rakesh
Kushniarevich, Alena
Francis, Amirtharaj
Costa, Marta D.
Pathak, Ajai Kumar
Khachatryan, Zaruhi
Sharma, Indu
van Oven, Mannis
Parik, Jüri
Hovhannisyan, Hrant
Metspalu, Ene
Pennarun, Erwan
Karmin, Monika
Tamm, Erika
Tambets, Kristiina
Bahmanimehr, Ardeshir
Reisberg, Tuuli
Reidla, Maere
Achilli, Alessandro
Olivieri, Anna
Gandini, Francesca
Perego, Ugo A.
Al-Zahery, Nadia
Houshmand, Massoud
Sanati, Mohammad Hossein
Soares, Pedro
Rai, Ekta
Šarac, Jelena
Šarić, Tena
Sharma, Varun
Pereira, Luisa
Fernandes, Veronica
Černý, Viktor
Farjadian, Shirin
Singh, Deepankar Pratap
Azakli, Hülya
Üstek, Duran
Ekomasova Trofimova, Natalia
Kutuev, Ildus
Litvinov, Sergei
Bermisheva, Marina
Khusnutdinova, Elza K.
Rai, Niraj
Singh, Manvendra
Singh, Vijay Kumar
Reddy, Alla G.
Tolk, Helle-Viivi
Cvjetan, Svjetlana
Lauc, Lovorka Barac
Rudan, Pavao
Michalodimitrakis, Emmanuel N.
Anagnou, Nicholas P.
Pappa, Kalliopi I.
Golubenko, Maria V.
Orekhov, Vladimir
Borinskaya, Svetlana A.
Kaldma, Katrin
Schauer, Monica A.
Simionescu, Maya
Gusar, Vladislava
Grechanina, Elena
Govindaraj, Periyasamy
Voevoda, Mikhail
Damba, Larissa
Sharma, Swarkar
Singh, Lalji
Semino, Ornella
Behar, Doron M
Yepiskoposyan, Levon
Richards, Martin B.
Metspalu, Mait
Kivisild, Toomas
Thangaraj, Kumarasamy
Endicott, Phillip
Chaubey, Gyaneshwer
Torroni, Antonio
Villems, Richard
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dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Sahakyan, Hovhannes
Hooshiar Kashani, Baharak
Tamang, Rakesh
Kushniarevich, Alena
Francis, Amirtharaj
Costa, Marta D.
Pathak, Ajai Kumar
Khachatryan, Zaruhi
Sharma, Indu
van Oven, Mannis
Parik, Jüri
Hovhannisyan, Hrant
Metspalu, Ene
Pennarun, Erwan
Karmin, Monika
Tamm, Erika
Tambets, Kristiina
Bahmanimehr, Ardeshir
Reisberg, Tuuli
Reidla, Maere
Achilli, Alessandro
Olivieri, Anna
Gandini, Francesca
Perego, Ugo A.
Al-Zahery, Nadia
Houshmand, Massoud
Sanati, Mohammad Hossein
Soares, Pedro
Rai, Ekta
Šarac, Jelena
Šarić, Tena
Sharma, Varun
Pereira, Luisa
Fernandes, Veronica
Černý, Viktor
Farjadian, Shirin
Singh, Deepankar Pratap
Azakli, Hülya
Üstek, Duran
Ekomasova Trofimova, Natalia
Kutuev, Ildus
Litvinov, Sergei
Bermisheva, Marina
Khusnutdinova, Elza K.
Rai, Niraj
Singh, Manvendra
Singh, Vijay Kumar
Reddy, Alla G.
Tolk, Helle-Viivi
Cvjetan, Svjetlana
Lauc, Lovorka Barac
Rudan, Pavao
Michalodimitrakis, Emmanuel N.
Anagnou, Nicholas P.
Pappa, Kalliopi I.
Golubenko, Maria V.
Orekhov, Vladimir
Borinskaya, Svetlana A.
Kaldma, Katrin
Schauer, Monica A.
Simionescu, Maya
Gusar, Vladislava
Grechanina, Elena
Govindaraj, Periyasamy
Voevoda, Mikhail
Damba, Larissa
Sharma, Swarkar
Singh, Lalji
Semino, Ornella
Behar, Doron M
Yepiskoposyan, Levon
Richards, Martin B.
Metspalu, Mait
Kivisild, Toomas
Thangaraj, Kumarasamy
Endicott, Phillip
Chaubey, Gyaneshwer
Torroni, Antonio
Villems, Richard
dc.subject.por.fl_str_mv Bayes Theorem
DNA, Mitochondrial
Geography
Haplotypes
Humans
Mutation
Phylogeny
Evolution, Molecular
Science & Technology
topic Bayes Theorem
DNA, Mitochondrial
Geography
Haplotypes
Humans
Mutation
Phylogeny
Evolution, Molecular
Science & Technology
description Human mitochondrial DNA haplogroup U is among the initial maternal founders in Southwest Asia and Europe and one that best indicates matrilineal genetic continuity between late Pleistocene hunter-gatherer groups and present-day populations of Europe. While most haplogroup U subclades are older than 30 thousand years, the comparatively recent coalescence time of the extant variation of haplogroup U7 (~16-19 thousand years ago) suggests that its current distribution is the consequence of more recent dispersal events, despite its wide geographical range across Europe, the Near East and South Asia. Here we report 267 new U7 mitogenomes that - analysed alongside 100 published ones - enable us to discern at least two distinct temporal phases of dispersal, both of which most likely emanated from the Near East. The earlier one began prior to the Holocene (~11.5 thousand years ago) towards South Asia, while the later dispersal took place more recently towards Mediterranean Europe during the Neolithic (~8 thousand years ago). These findings imply that the carriers of haplogroup U7 spread to South Asia and Europe before the suggested Bronze Age expansion of Indo-European languages from the Pontic-Caspian Steppe region.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/63890
url http://hdl.handle.net/1822/63890
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2045-2322
2045-2322
10.1038/srep46044
28387361
https://www.nature.com/articles/srep46044.pdf
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Nature Research
publisher.none.fl_str_mv Nature Research
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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