New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity

Detalhes bibliográficos
Autor(a) principal: Rendulic, Toni
Data de Publicação: 2021
Outros Autores: Alves, João, Azevedo-Silva, João, Soares-Silva, Isabel, Casal, Margarida
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/75506
Resumo: Aiming at improving the transport of biotechnologically relevant carboxylic acids in engineered microbial cell factories, the focus of this work was to study plasma membrane transporters belonging to the Acetate Uptake Transporter (AceTr) family. Ato1 and SatP, members of this family from Saccharomyces cerevisiae and Escherichia coli, respectively, are the main acetate transporters in these species. The analysis of conserved amino acid residues within AceTr family members combined with the study of Ato1 3D model based on SatP, was the rationale for selection of site-directed mutagenesis targets. The library of Ato1-GFP mutant alleles was functionally analysed in the S. cerevisiae IMX1000 strain which shows residual growth in all carboxylic acids tested. A gain of function phenotype was found for mutations in the residues F98 and L219 located at the central constrictive site of the pore, enabling cells to grow on lactic and on succinic acid. This phenotype was associated with an increased transport activity for these substrates. A dominant negative acetic acid hypersensitivity was induced in S. cerevisiae cells expressing the E144A mutant, which was associated with an increased acetic acid uptake. By utilizing computer-assisted 3D-modelling tools we highlight structural features that explain the acquired traits found in the analysed Ato1 mutants. Additionally, we achieved the proper expression of the Escherichia coli SatP, a homologue of Ato1, in S. cerevisiae. To our knowledge, this constitutes the first report of a fully functional bacterial plasma membrane transporter protein in yeast cells.
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spelling New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activityAto1Carboxylic acidsPlasma membrane transportYeastTransporter engineeringCiências Naturais::Ciências BiológicasScience & TechnologyAiming at improving the transport of biotechnologically relevant carboxylic acids in engineered microbial cell factories, the focus of this work was to study plasma membrane transporters belonging to the Acetate Uptake Transporter (AceTr) family. Ato1 and SatP, members of this family from Saccharomyces cerevisiae and Escherichia coli, respectively, are the main acetate transporters in these species. The analysis of conserved amino acid residues within AceTr family members combined with the study of Ato1 3D model based on SatP, was the rationale for selection of site-directed mutagenesis targets. The library of Ato1-GFP mutant alleles was functionally analysed in the S. cerevisiae IMX1000 strain which shows residual growth in all carboxylic acids tested. A gain of function phenotype was found for mutations in the residues F98 and L219 located at the central constrictive site of the pore, enabling cells to grow on lactic and on succinic acid. This phenotype was associated with an increased transport activity for these substrates. A dominant negative acetic acid hypersensitivity was induced in S. cerevisiae cells expressing the E144A mutant, which was associated with an increased acetic acid uptake. By utilizing computer-assisted 3D-modelling tools we highlight structural features that explain the acquired traits found in the analysed Ato1 mutants. Additionally, we achieved the proper expression of the Escherichia coli SatP, a homologue of Ato1, in S. cerevisiae. To our knowledge, this constitutes the first report of a fully functional bacterial plasma membrane transporter protein in yeast cells.This work was supported by the strategic programme UID/BIA/04050/2019 funded by Portuguese funds through the FCT-IP, the project TransAcids (PTDC/BIAMIC/5184/2014) funded by FCT-IP and ERDF by COMPETE 2020-POCI and the project River2Ocean NORTE-01-0145-FEDER-000068, co-financed by the European Regional Development Fund (ERDF) , through Programa Opera-cional Regional do Norte (NORTE 2020) as well as the European Union's Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie Yeastdoc grant agreement No 764927.ElsevierUniversidade do MinhoRendulic, ToniAlves, JoãoAzevedo-Silva, JoãoSoares-Silva, IsabelCasal, Margarida20212021-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/75506engRendulić, T., Alves, J., Azevedo-Silva, J., Soares-Silva, I., & Casal, M. (2021). New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity. Computational and Structural Biotechnology Journal, 19, 4412-4425. doi: https://doi.org/10.1016/j.csbj.2021.08.0022001-037010.1016/j.csbj.2021.08.002https://www.sciencedirect.com/science/article/pii/S2001037021003330info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:20:26Zoai:repositorium.sdum.uminho.pt:1822/75506Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:13:34.340526Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
title New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
spellingShingle New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
Rendulic, Toni
Ato1
Carboxylic acids
Plasma membrane transport
Yeast
Transporter engineering
Ciências Naturais::Ciências Biológicas
Science & Technology
title_short New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
title_full New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
title_fullStr New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
title_full_unstemmed New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
title_sort New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity
author Rendulic, Toni
author_facet Rendulic, Toni
Alves, João
Azevedo-Silva, João
Soares-Silva, Isabel
Casal, Margarida
author_role author
author2 Alves, João
Azevedo-Silva, João
Soares-Silva, Isabel
Casal, Margarida
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Rendulic, Toni
Alves, João
Azevedo-Silva, João
Soares-Silva, Isabel
Casal, Margarida
dc.subject.por.fl_str_mv Ato1
Carboxylic acids
Plasma membrane transport
Yeast
Transporter engineering
Ciências Naturais::Ciências Biológicas
Science & Technology
topic Ato1
Carboxylic acids
Plasma membrane transport
Yeast
Transporter engineering
Ciências Naturais::Ciências Biológicas
Science & Technology
description Aiming at improving the transport of biotechnologically relevant carboxylic acids in engineered microbial cell factories, the focus of this work was to study plasma membrane transporters belonging to the Acetate Uptake Transporter (AceTr) family. Ato1 and SatP, members of this family from Saccharomyces cerevisiae and Escherichia coli, respectively, are the main acetate transporters in these species. The analysis of conserved amino acid residues within AceTr family members combined with the study of Ato1 3D model based on SatP, was the rationale for selection of site-directed mutagenesis targets. The library of Ato1-GFP mutant alleles was functionally analysed in the S. cerevisiae IMX1000 strain which shows residual growth in all carboxylic acids tested. A gain of function phenotype was found for mutations in the residues F98 and L219 located at the central constrictive site of the pore, enabling cells to grow on lactic and on succinic acid. This phenotype was associated with an increased transport activity for these substrates. A dominant negative acetic acid hypersensitivity was induced in S. cerevisiae cells expressing the E144A mutant, which was associated with an increased acetic acid uptake. By utilizing computer-assisted 3D-modelling tools we highlight structural features that explain the acquired traits found in the analysed Ato1 mutants. Additionally, we achieved the proper expression of the Escherichia coli SatP, a homologue of Ato1, in S. cerevisiae. To our knowledge, this constitutes the first report of a fully functional bacterial plasma membrane transporter protein in yeast cells.
publishDate 2021
dc.date.none.fl_str_mv 2021
2021-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/75506
url http://hdl.handle.net/1822/75506
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Rendulić, T., Alves, J., Azevedo-Silva, J., Soares-Silva, I., & Casal, M. (2021). New insights into the acetate uptake transporter (AceTr) family: Unveiling amino acid residues critical for specificity and activity. Computational and Structural Biotechnology Journal, 19, 4412-4425. doi: https://doi.org/10.1016/j.csbj.2021.08.002
2001-0370
10.1016/j.csbj.2021.08.002
https://www.sciencedirect.com/science/article/pii/S2001037021003330
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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