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Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation

Detalhes bibliográficos
Autor(a) principal: Mendes-Ferreira, A.
Data de Publicação: 2007
Outros Autores: del Olmo, M., García-Martínez, J., Jiménez-Martí, E., Mendes-Faia, A., Pérez-Ortín, J. E., Leão, Cecília
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/67733
Resumo: Gene expression profiles of a wine strain of Saccharomyces cerevisiae PYCC4072 were monitored during alcoholic fermentations with three different nitrogen supplies: (i) control fermentation (with enough nitrogen to complete sugar fermentation), (ii) nitrogen-limiting fermentation, and (iii) the addition of nitrogen to the nitrogen-limiting fermentation (refed fermentation). Approximately 70% of the yeast transcriptome was altered in at least one of the fermentation stages studied, revealing the continuous adjustment of yeast cells to stressful conditions. Nitrogen concentration had a decisive effect on gene expression during fermentation. The largest changes in transcription profiles were observed when the early time points of the N-limiting and control fermentations were compared. Despite the high levels of glucose present in the media, the early responses of yeast cells to low nitrogen were characterized by the induction of genes involved in oxidative glucose metabolism, including a significant number of mitochondrial associated genes resembling the yeast cell response to glucose starvation. As the N-limiting fermentation progressed, a general downregulation of genes associated with catabolism was observed. Surprisingly, genes encoding ribosomal proteins and involved in ribosome biogenesis showed a slight increase during N starvation; besides, genes that comprise the RiBi regulon behaved distinctively under the different experimental conditions. Here, for the first time, the global response of nitrogen-depleted cells to nitrogen addition under enological conditions is described. An important gene expression reprogramming occurred after nitrogen addition; this reprogramming affected genes involved in glycolysis, thiamine metabolism, and energy pathways, which enabled the yeast strain to overcome the previous nitrogen starvation stress and restart alcoholic fermentation.
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spelling Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentationCluster AnalysisDNA PrimersEthanolFermentationGene Expression ProfilingNitrogenReverse Transcriptase Polymerase Chain ReactionSaccharomyces cerevisiaeWineGene Expression Regulation, FungalCiências Agrárias::Biotecnologia Agrária e AlimentarScience & TechnologyGene expression profiles of a wine strain of Saccharomyces cerevisiae PYCC4072 were monitored during alcoholic fermentations with three different nitrogen supplies: (i) control fermentation (with enough nitrogen to complete sugar fermentation), (ii) nitrogen-limiting fermentation, and (iii) the addition of nitrogen to the nitrogen-limiting fermentation (refed fermentation). Approximately 70% of the yeast transcriptome was altered in at least one of the fermentation stages studied, revealing the continuous adjustment of yeast cells to stressful conditions. Nitrogen concentration had a decisive effect on gene expression during fermentation. The largest changes in transcription profiles were observed when the early time points of the N-limiting and control fermentations were compared. Despite the high levels of glucose present in the media, the early responses of yeast cells to low nitrogen were characterized by the induction of genes involved in oxidative glucose metabolism, including a significant number of mitochondrial associated genes resembling the yeast cell response to glucose starvation. As the N-limiting fermentation progressed, a general downregulation of genes associated with catabolism was observed. Surprisingly, genes encoding ribosomal proteins and involved in ribosome biogenesis showed a slight increase during N starvation; besides, genes that comprise the RiBi regulon behaved distinctively under the different experimental conditions. Here, for the first time, the global response of nitrogen-depleted cells to nitrogen addition under enological conditions is described. An important gene expression reprogramming occurred after nitrogen addition; this reprogramming affected genes involved in glycolysis, thiamine metabolism, and energy pathways, which enabled the yeast strain to overcome the previous nitrogen starvation stress and restart alcoholic fermentation.Fundac¸a˜o Calouste Gulbenkian Grant during her stay at the Departamento de Bioquimica y Biologia Molecular of Universitat de Vale`ncia, Vale`ncia, Spain. Work in the Pe´rez-Ortı´n laboratory was funded by project BMC2003- 07072-C03-02 from Ministerio de Educacio´n y Ciencia to J.E.P.-O. and Grupos03/096 from Generalitat Vale`nciana to Vicente Tordera. This work has been also supported by grants AGL2002-01109 from the Spanish Ministerio de Ciencia y Tecnologı´a, AGL2005-00508 from the Spanish Ministerio de Educacio´n y Ciencia, and GRUPOS03/012 from the Generalitat ValencianaAmerican Society for MicrobiologyUniversidade do MinhoMendes-Ferreira, A.del Olmo, M.García-Martínez, J.Jiménez-Martí, E.Mendes-Faia, A.Pérez-Ortín, J. E.Leão, Cecília2007-052007-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/67733engMendes-Ferreira, A., Del Olmo, M., García-Martínez, J., Jiménez-Martí, E., et. al. (2007). Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation. Applied and Environmental Microbiology, 73(9), 3049-30600099-22401098-533610.1128/AEM.02754-0617337556https://aem.asm.org/content/73/9/3049.shortinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:51:13Zoai:repositorium.sdum.uminho.pt:1822/67733Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:50:04.474269Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
title Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
spellingShingle Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
Mendes-Ferreira, A.
Cluster Analysis
DNA Primers
Ethanol
Fermentation
Gene Expression Profiling
Nitrogen
Reverse Transcriptase Polymerase Chain Reaction
Saccharomyces cerevisiae
Wine
Gene Expression Regulation, Fungal
Ciências Agrárias::Biotecnologia Agrária e Alimentar
Science & Technology
title_short Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
title_full Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
title_fullStr Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
title_full_unstemmed Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
title_sort Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
author Mendes-Ferreira, A.
author_facet Mendes-Ferreira, A.
del Olmo, M.
García-Martínez, J.
Jiménez-Martí, E.
Mendes-Faia, A.
Pérez-Ortín, J. E.
Leão, Cecília
author_role author
author2 del Olmo, M.
García-Martínez, J.
Jiménez-Martí, E.
Mendes-Faia, A.
Pérez-Ortín, J. E.
Leão, Cecília
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Mendes-Ferreira, A.
del Olmo, M.
García-Martínez, J.
Jiménez-Martí, E.
Mendes-Faia, A.
Pérez-Ortín, J. E.
Leão, Cecília
dc.subject.por.fl_str_mv Cluster Analysis
DNA Primers
Ethanol
Fermentation
Gene Expression Profiling
Nitrogen
Reverse Transcriptase Polymerase Chain Reaction
Saccharomyces cerevisiae
Wine
Gene Expression Regulation, Fungal
Ciências Agrárias::Biotecnologia Agrária e Alimentar
Science & Technology
topic Cluster Analysis
DNA Primers
Ethanol
Fermentation
Gene Expression Profiling
Nitrogen
Reverse Transcriptase Polymerase Chain Reaction
Saccharomyces cerevisiae
Wine
Gene Expression Regulation, Fungal
Ciências Agrárias::Biotecnologia Agrária e Alimentar
Science & Technology
description Gene expression profiles of a wine strain of Saccharomyces cerevisiae PYCC4072 were monitored during alcoholic fermentations with three different nitrogen supplies: (i) control fermentation (with enough nitrogen to complete sugar fermentation), (ii) nitrogen-limiting fermentation, and (iii) the addition of nitrogen to the nitrogen-limiting fermentation (refed fermentation). Approximately 70% of the yeast transcriptome was altered in at least one of the fermentation stages studied, revealing the continuous adjustment of yeast cells to stressful conditions. Nitrogen concentration had a decisive effect on gene expression during fermentation. The largest changes in transcription profiles were observed when the early time points of the N-limiting and control fermentations were compared. Despite the high levels of glucose present in the media, the early responses of yeast cells to low nitrogen were characterized by the induction of genes involved in oxidative glucose metabolism, including a significant number of mitochondrial associated genes resembling the yeast cell response to glucose starvation. As the N-limiting fermentation progressed, a general downregulation of genes associated with catabolism was observed. Surprisingly, genes encoding ribosomal proteins and involved in ribosome biogenesis showed a slight increase during N starvation; besides, genes that comprise the RiBi regulon behaved distinctively under the different experimental conditions. Here, for the first time, the global response of nitrogen-depleted cells to nitrogen addition under enological conditions is described. An important gene expression reprogramming occurred after nitrogen addition; this reprogramming affected genes involved in glycolysis, thiamine metabolism, and energy pathways, which enabled the yeast strain to overcome the previous nitrogen starvation stress and restart alcoholic fermentation.
publishDate 2007
dc.date.none.fl_str_mv 2007-05
2007-05-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/67733
url http://hdl.handle.net/1822/67733
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mendes-Ferreira, A., Del Olmo, M., García-Martínez, J., Jiménez-Martí, E., et. al. (2007). Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation. Applied and Environmental Microbiology, 73(9), 3049-3060
0099-2240
1098-5336
10.1128/AEM.02754-06
17337556
https://aem.asm.org/content/73/9/3049.short
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv American Society for Microbiology
publisher.none.fl_str_mv American Society for Microbiology
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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