Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation
Autor(a) principal: | |
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Data de Publicação: | 2007 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/1822/67733 |
Resumo: | Gene expression profiles of a wine strain of Saccharomyces cerevisiae PYCC4072 were monitored during alcoholic fermentations with three different nitrogen supplies: (i) control fermentation (with enough nitrogen to complete sugar fermentation), (ii) nitrogen-limiting fermentation, and (iii) the addition of nitrogen to the nitrogen-limiting fermentation (refed fermentation). Approximately 70% of the yeast transcriptome was altered in at least one of the fermentation stages studied, revealing the continuous adjustment of yeast cells to stressful conditions. Nitrogen concentration had a decisive effect on gene expression during fermentation. The largest changes in transcription profiles were observed when the early time points of the N-limiting and control fermentations were compared. Despite the high levels of glucose present in the media, the early responses of yeast cells to low nitrogen were characterized by the induction of genes involved in oxidative glucose metabolism, including a significant number of mitochondrial associated genes resembling the yeast cell response to glucose starvation. As the N-limiting fermentation progressed, a general downregulation of genes associated with catabolism was observed. Surprisingly, genes encoding ribosomal proteins and involved in ribosome biogenesis showed a slight increase during N starvation; besides, genes that comprise the RiBi regulon behaved distinctively under the different experimental conditions. Here, for the first time, the global response of nitrogen-depleted cells to nitrogen addition under enological conditions is described. An important gene expression reprogramming occurred after nitrogen addition; this reprogramming affected genes involved in glycolysis, thiamine metabolism, and energy pathways, which enabled the yeast strain to overcome the previous nitrogen starvation stress and restart alcoholic fermentation. |
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Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentationCluster AnalysisDNA PrimersEthanolFermentationGene Expression ProfilingNitrogenReverse Transcriptase Polymerase Chain ReactionSaccharomyces cerevisiaeWineGene Expression Regulation, FungalCiências Agrárias::Biotecnologia Agrária e AlimentarScience & TechnologyGene expression profiles of a wine strain of Saccharomyces cerevisiae PYCC4072 were monitored during alcoholic fermentations with three different nitrogen supplies: (i) control fermentation (with enough nitrogen to complete sugar fermentation), (ii) nitrogen-limiting fermentation, and (iii) the addition of nitrogen to the nitrogen-limiting fermentation (refed fermentation). Approximately 70% of the yeast transcriptome was altered in at least one of the fermentation stages studied, revealing the continuous adjustment of yeast cells to stressful conditions. Nitrogen concentration had a decisive effect on gene expression during fermentation. The largest changes in transcription profiles were observed when the early time points of the N-limiting and control fermentations were compared. Despite the high levels of glucose present in the media, the early responses of yeast cells to low nitrogen were characterized by the induction of genes involved in oxidative glucose metabolism, including a significant number of mitochondrial associated genes resembling the yeast cell response to glucose starvation. As the N-limiting fermentation progressed, a general downregulation of genes associated with catabolism was observed. Surprisingly, genes encoding ribosomal proteins and involved in ribosome biogenesis showed a slight increase during N starvation; besides, genes that comprise the RiBi regulon behaved distinctively under the different experimental conditions. Here, for the first time, the global response of nitrogen-depleted cells to nitrogen addition under enological conditions is described. An important gene expression reprogramming occurred after nitrogen addition; this reprogramming affected genes involved in glycolysis, thiamine metabolism, and energy pathways, which enabled the yeast strain to overcome the previous nitrogen starvation stress and restart alcoholic fermentation.Fundac¸a˜o Calouste Gulbenkian Grant during her stay at the Departamento de Bioquimica y Biologia Molecular of Universitat de Vale`ncia, Vale`ncia, Spain. Work in the Pe´rez-Ortı´n laboratory was funded by project BMC2003- 07072-C03-02 from Ministerio de Educacio´n y Ciencia to J.E.P.-O. and Grupos03/096 from Generalitat Vale`nciana to Vicente Tordera. This work has been also supported by grants AGL2002-01109 from the Spanish Ministerio de Ciencia y Tecnologı´a, AGL2005-00508 from the Spanish Ministerio de Educacio´n y Ciencia, and GRUPOS03/012 from the Generalitat ValencianaAmerican Society for MicrobiologyUniversidade do MinhoMendes-Ferreira, A.del Olmo, M.García-Martínez, J.Jiménez-Martí, E.Mendes-Faia, A.Pérez-Ortín, J. E.Leão, Cecília2007-052007-05-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/67733engMendes-Ferreira, A., Del Olmo, M., García-Martínez, J., Jiménez-Martí, E., et. al. (2007). Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation. Applied and Environmental Microbiology, 73(9), 3049-30600099-22401098-533610.1128/AEM.02754-0617337556https://aem.asm.org/content/73/9/3049.shortinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:51:13Zoai:repositorium.sdum.uminho.pt:1822/67733Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:50:04.474269Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
title |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
spellingShingle |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation Mendes-Ferreira, A. Cluster Analysis DNA Primers Ethanol Fermentation Gene Expression Profiling Nitrogen Reverse Transcriptase Polymerase Chain Reaction Saccharomyces cerevisiae Wine Gene Expression Regulation, Fungal Ciências Agrárias::Biotecnologia Agrária e Alimentar Science & Technology |
title_short |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
title_full |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
title_fullStr |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
title_full_unstemmed |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
title_sort |
Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation |
author |
Mendes-Ferreira, A. |
author_facet |
Mendes-Ferreira, A. del Olmo, M. García-Martínez, J. Jiménez-Martí, E. Mendes-Faia, A. Pérez-Ortín, J. E. Leão, Cecília |
author_role |
author |
author2 |
del Olmo, M. García-Martínez, J. Jiménez-Martí, E. Mendes-Faia, A. Pérez-Ortín, J. E. Leão, Cecília |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Minho |
dc.contributor.author.fl_str_mv |
Mendes-Ferreira, A. del Olmo, M. García-Martínez, J. Jiménez-Martí, E. Mendes-Faia, A. Pérez-Ortín, J. E. Leão, Cecília |
dc.subject.por.fl_str_mv |
Cluster Analysis DNA Primers Ethanol Fermentation Gene Expression Profiling Nitrogen Reverse Transcriptase Polymerase Chain Reaction Saccharomyces cerevisiae Wine Gene Expression Regulation, Fungal Ciências Agrárias::Biotecnologia Agrária e Alimentar Science & Technology |
topic |
Cluster Analysis DNA Primers Ethanol Fermentation Gene Expression Profiling Nitrogen Reverse Transcriptase Polymerase Chain Reaction Saccharomyces cerevisiae Wine Gene Expression Regulation, Fungal Ciências Agrárias::Biotecnologia Agrária e Alimentar Science & Technology |
description |
Gene expression profiles of a wine strain of Saccharomyces cerevisiae PYCC4072 were monitored during alcoholic fermentations with three different nitrogen supplies: (i) control fermentation (with enough nitrogen to complete sugar fermentation), (ii) nitrogen-limiting fermentation, and (iii) the addition of nitrogen to the nitrogen-limiting fermentation (refed fermentation). Approximately 70% of the yeast transcriptome was altered in at least one of the fermentation stages studied, revealing the continuous adjustment of yeast cells to stressful conditions. Nitrogen concentration had a decisive effect on gene expression during fermentation. The largest changes in transcription profiles were observed when the early time points of the N-limiting and control fermentations were compared. Despite the high levels of glucose present in the media, the early responses of yeast cells to low nitrogen were characterized by the induction of genes involved in oxidative glucose metabolism, including a significant number of mitochondrial associated genes resembling the yeast cell response to glucose starvation. As the N-limiting fermentation progressed, a general downregulation of genes associated with catabolism was observed. Surprisingly, genes encoding ribosomal proteins and involved in ribosome biogenesis showed a slight increase during N starvation; besides, genes that comprise the RiBi regulon behaved distinctively under the different experimental conditions. Here, for the first time, the global response of nitrogen-depleted cells to nitrogen addition under enological conditions is described. An important gene expression reprogramming occurred after nitrogen addition; this reprogramming affected genes involved in glycolysis, thiamine metabolism, and energy pathways, which enabled the yeast strain to overcome the previous nitrogen starvation stress and restart alcoholic fermentation. |
publishDate |
2007 |
dc.date.none.fl_str_mv |
2007-05 2007-05-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/1822/67733 |
url |
http://hdl.handle.net/1822/67733 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Mendes-Ferreira, A., Del Olmo, M., García-Martínez, J., Jiménez-Martí, E., et. al. (2007). Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation. Applied and Environmental Microbiology, 73(9), 3049-3060 0099-2240 1098-5336 10.1128/AEM.02754-06 17337556 https://aem.asm.org/content/73/9/3049.short |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
American Society for Microbiology |
publisher.none.fl_str_mv |
American Society for Microbiology |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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