What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria

Detalhes bibliográficos
Autor(a) principal: Barbato, Marta
Data de Publicação: 2022
Outros Autores: Vacchini, Violetta, Engelen, Aschwin, Patania, Giovanni, Mapelli, Francesca, Borin, Sara, Crotti, Elena
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/18135
Resumo: Macroalgal surface constitutes a peculiar ecological niche and an advantageous substratum for microorganisms able to degrade the wide diversity of algal glycans. The degrading enzymatic activities of macroalgal epiphytes are of paramount interest for the industrial by-product sector and biomass resource applications. We characterized the polysaccharide hydrolytic profle of bacterial isolates obtained from three macroalgal species: the red macroalgae Asparagopsis taxiformis and Sphaerococcus coronopifolius (Rhodophyceae) and the brown Halopteris scoparia (Phaeophyceae), sampled in South Portugal. Bacterial enrichment cultures supplemented with chlorinated aliphatic compounds, typically released by marine algae, were established using as inoculum the decaying biomass of the three macroalgae, obtaining a collection of 634 bacterial strains. Although collected from the same site and exposed to the same seawater seeding microbiota, macroalgal cultivable bacterial communities in terms of functional and phylogenetic diversity showed host specifcity. Isolates were tested for the hydrolysis of starch, pectin, alginate and agar, exhibiting a diferent hydrolytic potential according to their host: A. taxiformis showed the highest percentage of active isolates (91%), followed by S. coronopifolius (54%) and H. scoparia (46%). Only 30% of the isolates were able to degrade starch, while the other polymers were degraded by 55–58% of the isolates. Interestingly, several isolates showed promiscuous capacities to hydrolyze more than one polysaccharide. The isolate functional fngerprint was statistically correlated to bacterial phylogeny, host species and enrichment medium. In conclusion, this work depicts macroalgae as holobionts with an associated microbiota of interest for blue biotechnologies, suggesting isolation strategies and bacterial targets for polysaccharidases’ discovery
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spelling What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteriaBlue biotechnologyEpibiotaSeaweedsBioprospectingCultivable microbiotaPolysaccharidasesMacroalgal surface constitutes a peculiar ecological niche and an advantageous substratum for microorganisms able to degrade the wide diversity of algal glycans. The degrading enzymatic activities of macroalgal epiphytes are of paramount interest for the industrial by-product sector and biomass resource applications. We characterized the polysaccharide hydrolytic profle of bacterial isolates obtained from three macroalgal species: the red macroalgae Asparagopsis taxiformis and Sphaerococcus coronopifolius (Rhodophyceae) and the brown Halopteris scoparia (Phaeophyceae), sampled in South Portugal. Bacterial enrichment cultures supplemented with chlorinated aliphatic compounds, typically released by marine algae, were established using as inoculum the decaying biomass of the three macroalgae, obtaining a collection of 634 bacterial strains. Although collected from the same site and exposed to the same seawater seeding microbiota, macroalgal cultivable bacterial communities in terms of functional and phylogenetic diversity showed host specifcity. Isolates were tested for the hydrolysis of starch, pectin, alginate and agar, exhibiting a diferent hydrolytic potential according to their host: A. taxiformis showed the highest percentage of active isolates (91%), followed by S. coronopifolius (54%) and H. scoparia (46%). Only 30% of the isolates were able to degrade starch, while the other polymers were degraded by 55–58% of the isolates. Interestingly, several isolates showed promiscuous capacities to hydrolyze more than one polysaccharide. The isolate functional fngerprint was statistically correlated to bacterial phylogeny, host species and enrichment medium. In conclusion, this work depicts macroalgae as holobionts with an associated microbiota of interest for blue biotechnologies, suggesting isolation strategies and bacterial targets for polysaccharidases’ discoverySpringerSapientiaBarbato, MartaVacchini, ViolettaEngelen, AschwinPatania, GiovanniMapelli, FrancescaBorin, SaraCrotti, Elena2022-08-01T10:46:43Z2022-07-272022-08-01T03:13:20Z2022-07-27T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/18135engAMB Express. 2022 Jul 27;12(1):9810.1186/s13568-022-01440-82191-0855info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:30:22Zoai:sapientia.ualg.pt:10400.1/18135Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:07:55.889296Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
title What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
spellingShingle What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
Barbato, Marta
Blue biotechnology
Epibiota
Seaweeds
Bioprospecting
Cultivable microbiota
Polysaccharidases
title_short What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
title_full What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
title_fullStr What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
title_full_unstemmed What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
title_sort What lies on macroalgal surface: diversity of polysaccharide degraders in culturable epiphytic bacteria
author Barbato, Marta
author_facet Barbato, Marta
Vacchini, Violetta
Engelen, Aschwin
Patania, Giovanni
Mapelli, Francesca
Borin, Sara
Crotti, Elena
author_role author
author2 Vacchini, Violetta
Engelen, Aschwin
Patania, Giovanni
Mapelli, Francesca
Borin, Sara
Crotti, Elena
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Barbato, Marta
Vacchini, Violetta
Engelen, Aschwin
Patania, Giovanni
Mapelli, Francesca
Borin, Sara
Crotti, Elena
dc.subject.por.fl_str_mv Blue biotechnology
Epibiota
Seaweeds
Bioprospecting
Cultivable microbiota
Polysaccharidases
topic Blue biotechnology
Epibiota
Seaweeds
Bioprospecting
Cultivable microbiota
Polysaccharidases
description Macroalgal surface constitutes a peculiar ecological niche and an advantageous substratum for microorganisms able to degrade the wide diversity of algal glycans. The degrading enzymatic activities of macroalgal epiphytes are of paramount interest for the industrial by-product sector and biomass resource applications. We characterized the polysaccharide hydrolytic profle of bacterial isolates obtained from three macroalgal species: the red macroalgae Asparagopsis taxiformis and Sphaerococcus coronopifolius (Rhodophyceae) and the brown Halopteris scoparia (Phaeophyceae), sampled in South Portugal. Bacterial enrichment cultures supplemented with chlorinated aliphatic compounds, typically released by marine algae, were established using as inoculum the decaying biomass of the three macroalgae, obtaining a collection of 634 bacterial strains. Although collected from the same site and exposed to the same seawater seeding microbiota, macroalgal cultivable bacterial communities in terms of functional and phylogenetic diversity showed host specifcity. Isolates were tested for the hydrolysis of starch, pectin, alginate and agar, exhibiting a diferent hydrolytic potential according to their host: A. taxiformis showed the highest percentage of active isolates (91%), followed by S. coronopifolius (54%) and H. scoparia (46%). Only 30% of the isolates were able to degrade starch, while the other polymers were degraded by 55–58% of the isolates. Interestingly, several isolates showed promiscuous capacities to hydrolyze more than one polysaccharide. The isolate functional fngerprint was statistically correlated to bacterial phylogeny, host species and enrichment medium. In conclusion, this work depicts macroalgae as holobionts with an associated microbiota of interest for blue biotechnologies, suggesting isolation strategies and bacterial targets for polysaccharidases’ discovery
publishDate 2022
dc.date.none.fl_str_mv 2022-08-01T10:46:43Z
2022-07-27
2022-08-01T03:13:20Z
2022-07-27T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/18135
url http://hdl.handle.net/10400.1/18135
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv AMB Express. 2022 Jul 27;12(1):98
10.1186/s13568-022-01440-8
2191-0855
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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