Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.18/6510 |
Resumo: | The molecular epidemiology and antifungal susceptibility of Aspergillus nidulans species complex has not been well studied. To evaluate the genetic diversity and antifungal susceptibility patterns of clinical and environmental isolates of A. nidulans complex. Sixty clinical and environmental isolates of Aspergillus section Nidulantes were collected from five countries (Iran, The Netherlands, Spain, Portugal and Greece). The species were molecularly identified by sequencing of β-tubulin gene. The genetic diversity of A nidulans complex isolates (n = 54) was determined with a microsatellite genotyping assay. Antifungal susceptibility profile was determined using EUCAST method. The isolates were classified as A nidulans (46.7%), A spinulosporus (26.6%), A quadrilineatus (10%), A pachycristatus (3.3%), A rugulosus (3.3%), A unguis (5%), A creber, (1.7%), A olivicola (1.7%) and A sydowii (1.7%). Thirty-four sequence types (STs) were identified among the 54 A nidulans complex isolates. A high level of genetic diversity was found among A nidulans sensu stricto strains but low diversity was found among A spinulosporus strains. Amphotericin B showed high MICs to all species. The most active azole was posaconazole (GM = 0.64 mg/L), while itraconazole showed the highest MICs among azoles (GM = 2.95 mg/L). A spinulosporus showed higher MICs than A nidulans sensu stricto for all antifungals except for micafungin and anidulafungin. Interspecies variations may result in differences in antifungal susceptibility patterns and challenge antifungal therapy in infections caused by A nidulans. Differences in the distribution of STs or persistence of multiple STs might be related to the sources of isolation and niche specialisation. |
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Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sourcesAspergillus nidulansMicrosatellitesAspergilosisAntifungal Susceptibilityβ-tubulinAspergillus spinulosporusAmphotericin BCryptic SpeciesGenetic DiversInfecções Sistémicas e ZoonosesThe molecular epidemiology and antifungal susceptibility of Aspergillus nidulans species complex has not been well studied. To evaluate the genetic diversity and antifungal susceptibility patterns of clinical and environmental isolates of A. nidulans complex. Sixty clinical and environmental isolates of Aspergillus section Nidulantes were collected from five countries (Iran, The Netherlands, Spain, Portugal and Greece). The species were molecularly identified by sequencing of β-tubulin gene. The genetic diversity of A nidulans complex isolates (n = 54) was determined with a microsatellite genotyping assay. Antifungal susceptibility profile was determined using EUCAST method. The isolates were classified as A nidulans (46.7%), A spinulosporus (26.6%), A quadrilineatus (10%), A pachycristatus (3.3%), A rugulosus (3.3%), A unguis (5%), A creber, (1.7%), A olivicola (1.7%) and A sydowii (1.7%). Thirty-four sequence types (STs) were identified among the 54 A nidulans complex isolates. A high level of genetic diversity was found among A nidulans sensu stricto strains but low diversity was found among A spinulosporus strains. Amphotericin B showed high MICs to all species. The most active azole was posaconazole (GM = 0.64 mg/L), while itraconazole showed the highest MICs among azoles (GM = 2.95 mg/L). A spinulosporus showed higher MICs than A nidulans sensu stricto for all antifungals except for micafungin and anidulafungin. Interspecies variations may result in differences in antifungal susceptibility patterns and challenge antifungal therapy in infections caused by A nidulans. Differences in the distribution of STs or persistence of multiple STs might be related to the sources of isolation and niche specialisation.This project was supported in part by a research project from the Fondo de Investigación Sanitaria (PI16CIII/00035) and a research fund (No. 2819) from Invasive Fungi Research Center of Mazandaran University of Medical Sciences, Sari, Iran.Wiley/ Deutschsprachige Mykologische GesellschaftRepositório Científico do Instituto Nacional de SaúdeTavakoli, MahinRivero‐Menendez, OlgaAbastabar, MahdiHedayati, Mohammad T.Sabino, RaquelSiopi, MariaZarrinfar, HosseinNouripour‐Sisakht, SadeghLee, HenrichValadan, RezaMeletiadis, JosephYazdani Charati, JamshidSeyedmousavi, SeyedmojtabaAlastruey‐Izquierdo, Ana2020-04-24T11:49:57Z2019-11-032019-11-03T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/6510engMycoses. 2020 Jan;63(1):78-88. doi: 10.1111/myc.13019. Epub 2019 Nov 30933-740710.1111/myc.13019info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:41:32Zoai:repositorio.insa.pt:10400.18/6510Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:41:17.837050Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
title |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
spellingShingle |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources Tavakoli, Mahin Aspergillus nidulans Microsatellites Aspergilosis Antifungal Susceptibility β-tubulin Aspergillus spinulosporus Amphotericin B Cryptic Species Genetic Divers Infecções Sistémicas e Zoonoses |
title_short |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
title_full |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
title_fullStr |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
title_full_unstemmed |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
title_sort |
Genetic diversity and antifungal susceptibility patterns of Aspergillus nidulan complex obtained from clinical and environmental sources |
author |
Tavakoli, Mahin |
author_facet |
Tavakoli, Mahin Rivero‐Menendez, Olga Abastabar, Mahdi Hedayati, Mohammad T. Sabino, Raquel Siopi, Maria Zarrinfar, Hossein Nouripour‐Sisakht, Sadegh Lee, Henrich Valadan, Reza Meletiadis, Joseph Yazdani Charati, Jamshid Seyedmousavi, Seyedmojtaba Alastruey‐Izquierdo, Ana |
author_role |
author |
author2 |
Rivero‐Menendez, Olga Abastabar, Mahdi Hedayati, Mohammad T. Sabino, Raquel Siopi, Maria Zarrinfar, Hossein Nouripour‐Sisakht, Sadegh Lee, Henrich Valadan, Reza Meletiadis, Joseph Yazdani Charati, Jamshid Seyedmousavi, Seyedmojtaba Alastruey‐Izquierdo, Ana |
author2_role |
author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Nacional de Saúde |
dc.contributor.author.fl_str_mv |
Tavakoli, Mahin Rivero‐Menendez, Olga Abastabar, Mahdi Hedayati, Mohammad T. Sabino, Raquel Siopi, Maria Zarrinfar, Hossein Nouripour‐Sisakht, Sadegh Lee, Henrich Valadan, Reza Meletiadis, Joseph Yazdani Charati, Jamshid Seyedmousavi, Seyedmojtaba Alastruey‐Izquierdo, Ana |
dc.subject.por.fl_str_mv |
Aspergillus nidulans Microsatellites Aspergilosis Antifungal Susceptibility β-tubulin Aspergillus spinulosporus Amphotericin B Cryptic Species Genetic Divers Infecções Sistémicas e Zoonoses |
topic |
Aspergillus nidulans Microsatellites Aspergilosis Antifungal Susceptibility β-tubulin Aspergillus spinulosporus Amphotericin B Cryptic Species Genetic Divers Infecções Sistémicas e Zoonoses |
description |
The molecular epidemiology and antifungal susceptibility of Aspergillus nidulans species complex has not been well studied. To evaluate the genetic diversity and antifungal susceptibility patterns of clinical and environmental isolates of A. nidulans complex. Sixty clinical and environmental isolates of Aspergillus section Nidulantes were collected from five countries (Iran, The Netherlands, Spain, Portugal and Greece). The species were molecularly identified by sequencing of β-tubulin gene. The genetic diversity of A nidulans complex isolates (n = 54) was determined with a microsatellite genotyping assay. Antifungal susceptibility profile was determined using EUCAST method. The isolates were classified as A nidulans (46.7%), A spinulosporus (26.6%), A quadrilineatus (10%), A pachycristatus (3.3%), A rugulosus (3.3%), A unguis (5%), A creber, (1.7%), A olivicola (1.7%) and A sydowii (1.7%). Thirty-four sequence types (STs) were identified among the 54 A nidulans complex isolates. A high level of genetic diversity was found among A nidulans sensu stricto strains but low diversity was found among A spinulosporus strains. Amphotericin B showed high MICs to all species. The most active azole was posaconazole (GM = 0.64 mg/L), while itraconazole showed the highest MICs among azoles (GM = 2.95 mg/L). A spinulosporus showed higher MICs than A nidulans sensu stricto for all antifungals except for micafungin and anidulafungin. Interspecies variations may result in differences in antifungal susceptibility patterns and challenge antifungal therapy in infections caused by A nidulans. Differences in the distribution of STs or persistence of multiple STs might be related to the sources of isolation and niche specialisation. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-11-03 2019-11-03T00:00:00Z 2020-04-24T11:49:57Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.18/6510 |
url |
http://hdl.handle.net/10400.18/6510 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Mycoses. 2020 Jan;63(1):78-88. doi: 10.1111/myc.13019. Epub 2019 Nov 3 0933-7407 10.1111/myc.13019 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/embargoedAccess |
eu_rights_str_mv |
embargoedAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Wiley/ Deutschsprachige Mykologische Gesellschaft |
publisher.none.fl_str_mv |
Wiley/ Deutschsprachige Mykologische Gesellschaft |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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RCAAP |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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