Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde

Detalhes bibliográficos
Autor(a) principal: da Veiga Leal, Silvânia
Data de Publicação: 2024
Outros Autores: de Pina Araújo, Isabel Inês, Pimentel, Victor, Parreira, Ricardo, Gonçalves, Paloma, Pingarilho, Marta, Taveira, Nuno, Barroso Abecasis, Ana
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://doi.org/10.25761/anaisihmt.455
Resumo: Introduction: The diagnosis of HIV with Transmitted Drug Resistance Mutations (TDR) limits therapeutic options and consequently complicates the management of HIV-1 cases. Objective: The aim of this study was to describe the molecular epidemiological profile and TDR in individuals newly diagnosed with HIV-1 from 2018 to 2020. Materials and methods: The HIV-1 pol gene was amplified and sequenced using the Sanger method. The analysis of the genomic sequence was performed using the Stanford Calibrated Population Resistance tool to detect transmitted drug resistance mutations, and resistance levels to different drugs were analyzed based on the Stanford HIVdb Program algorithm. Epidemiological and behavioral data were obtained through questionnaires. Results: Out of 176 participants newly diagnosed with HIV-1, 52.3% were male and 47.2% were female, with the majority falling within the age group of 35 to 64 years. Heterosexual contact was the reported mode of transmission in most cases (92.6%). 73 sequences were successfully genotyped. CRF02_AG (41%) was the most prevalent subtype, followed by subtype G (37%) and B (10%). TDR was present in 9.6% (n=7) of cases. The prevalence of mutations associated with Nucleoside Reverse Transcriptase Inhibitors was 2.75%, and for Non-Nucleoside Reverse Transcriptase Inhibitors, it was 9.6% (n=7). K103N (5.5%) and M184V (2.7%) were the most prevalent mutations. The majority of mutations were detected in CRF02_AG strains (57.1%). Conclusion: The high resistance to NNRTIs may compromise the effectiveness of therapeutic regimens, highlighting the need to consider the use of an integrase inhibitor, such as Dolutegravir, as a first-line treatment option, in addition to continuous monitoring to ensure its effectiveness and durability.
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spelling Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo VerdeProfil épidémiologique, comportemental et moléculaire des personnes nouvellement diagnostiquées avec le VIH-1 au Cabo VerdePerfil epidemiológico, comportamental e molecular de indivíduos recém-diagnosticados com VIH-1 em Cabo VerdeIntroduction: The diagnosis of HIV with Transmitted Drug Resistance Mutations (TDR) limits therapeutic options and consequently complicates the management of HIV-1 cases. Objective: The aim of this study was to describe the molecular epidemiological profile and TDR in individuals newly diagnosed with HIV-1 from 2018 to 2020. Materials and methods: The HIV-1 pol gene was amplified and sequenced using the Sanger method. The analysis of the genomic sequence was performed using the Stanford Calibrated Population Resistance tool to detect transmitted drug resistance mutations, and resistance levels to different drugs were analyzed based on the Stanford HIVdb Program algorithm. Epidemiological and behavioral data were obtained through questionnaires. Results: Out of 176 participants newly diagnosed with HIV-1, 52.3% were male and 47.2% were female, with the majority falling within the age group of 35 to 64 years. Heterosexual contact was the reported mode of transmission in most cases (92.6%). 73 sequences were successfully genotyped. CRF02_AG (41%) was the most prevalent subtype, followed by subtype G (37%) and B (10%). TDR was present in 9.6% (n=7) of cases. The prevalence of mutations associated with Nucleoside Reverse Transcriptase Inhibitors was 2.75%, and for Non-Nucleoside Reverse Transcriptase Inhibitors, it was 9.6% (n=7). K103N (5.5%) and M184V (2.7%) were the most prevalent mutations. The majority of mutations were detected in CRF02_AG strains (57.1%). Conclusion: The high resistance to NNRTIs may compromise the effectiveness of therapeutic regimens, highlighting the need to consider the use of an integrase inhibitor, such as Dolutegravir, as a first-line treatment option, in addition to continuous monitoring to ensure its effectiveness and durability.Introduction: Le diagnostic du VIH avec des mutations de résistance aux médicaments transmises (TDR) limite les options thérapeutiques et complique ainsi la gestion des cas de VIH-1. Objectif: L’objectif de cette étude était de décrire le profil épidémiologique moléculaire et les TDR chez les individus nouvellement diagnostiqués avec le VIH-1 de 2018 à 2020. Matériel et méthodes: Le gène pol du VIH-1 a été amplifié et séquencé en utilisant la méthode de Sanger. L’analyse de la séquence génomique a été réalisée en utilisant l’outil Stanford Calibrated Population Resistance pour détecter les mutations de résistance aux médicaments transmises, et les niveaux de résistance aux différents médicaments ont été analysés en fonction de l’algorithme du programme Stanford HIVdb. Les données épidémiologiques et comportementales ont été obtenues à l’aide de questionnaires. Résultats: Sur les 176 participants nouvellement diagnostiqués avec le VIH-1, 52,3% étaient des hommes et 47,2% étaient des femmes, la majorité étant âgée de 35 à 64 ans. Le contact hétérosexuel était le mode de transmission le plus fréquemment signalé (92,6%). 73 séquences ont été géno-typées avec succès. CRF02_AG (41%) était le sous-type le plus prévalent, suivi par le sous-type G (37%) et B (10%). Les TDR étaient présentes dans 9,6% (n=7) des cas. La prévalence des mutations associées aux inhibiteurs nucléosidiques de la transcriptase inverse était de 2,75%, et pour les inhibiteurs non nucléosidiques de la transcriptase inverse, elle était de 9,6% (n=7). K103N (5,5%) et M184V (2,7%) étaient les mutations les plus prévalentes. La majorité des mutations ont été détectées dans les souches CRF02_AG (57,1%). Conclusion: La forte résistance aux NNRTIs peut compromettre l’efficacité des schémas thérapeutiques, soulignant la nécessité de considérer l’utilisation d’un inhibiteur de l’intégrase, tel que le Dolutégravir, comme option de traitement de première intention, en plus d’une surveillance continue pour garantir son efficacité et sa durabilité.Introdução: O diagnóstico de VIH com Mutações de Resistência Transmitida (TDR) limita a opção terapêuticas e consequentemente dificulta a gestão de casos VIH-1. Objetivo: Este artigo tem como objetivo descrever o perfil epidemiológico molecular e de TDR em indivíduos com diagnóstico recente de VIH-1, no período de 2018 a 2020. Materiais e métodos: O gene pol VIH-1 foi amplificado e sequenciado pelo método Sanger. A análise da sequência genómica foi realizada utilizando a ferramenta de Stanford Calibrated Population Resistance para detetar mutações de resistência transmitida, e os níveis de resistência aos diferentes fármacos foram analisados com base no algoritmo Stanford HIVdb Program. Os dados epidemiológicos e comportamentais foram obtidos através de questionários. Resultados: Dos 176 participantes com VIH-1 diagnosticados de novo, 52,3% eram do sexo masculino e 47,2% feminino, e a maioria pertencia à faixa etária dos 35 a 64 anos. O contacto heterossexual foi o modo de transmissão reportado na maioria dos casos (92,6 %). 73 sequências foram genotipadas com sucesso. O CRF02_AG (41%) foi o subtipo mais prevalente seguido por subtipo G (37%) e B (10%). TDR foi de 9,6% (n=7). A prevalência de mutações de resistência aos Inibidores Nucleósideos da Transcriptase Reversa foi de 2.75% e as associadas aos Inibidores Não Nucleosídeos da Transcriptase Reversa foi de 9.6% (n=7). K103N (5.5%) e M184V (2.7%) foram as mutações mais prevalentes. A maioria das mutações foram detetadas em estirpes do CFR02_AG (57.1%). Conclusão: A elevada resistência aos Não Nucleósidos da Transcriptase Reversa (NNRTIs) pode comprometer a eficácia dos regimes terapêuticos atuais no país, destacando a necessidade de considerar o uso de um inibidor da integrase, como o Dolutegravir, como opção de primeira linha de tratamento, além de uma vigilância contínua para garantir sua eficácia e durabilidade.Universidade Nova de Lisboa2024-01-31info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://doi.org/10.25761/anaisihmt.455https://doi.org/10.25761/anaisihmt.455Anais do Instituto de Higiene e Medicina Tropical; Vol 22 No 2 (2023): Medicina Tropical e Desenvolvimento Sustentável - 6.º Congresso Nacional de Medicina Tropical; 41-49Anais do Instituto de Higiene e Medicina Tropical; v. 22 n. 2 (2023): Medicina Tropical e Desenvolvimento Sustentável - 6.º Congresso Nacional de Medicina Tropical; 41-492184-23100303-7762reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAPporhttp://anaisihmt.com/index.php/ihmt/article/view/455http://anaisihmt.com/index.php/ihmt/article/view/455/377Direitos de Autor (c) 2024 Anais do Instituto de Higiene e Medicina Tropicalhttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessda Veiga Leal, Silvâniade Pina Araújo, Isabel InêsPimentel, VictorParreira, RicardoGonçalves, PalomaPingarilho, MartaTaveira, NunoBarroso Abecasis, Ana2024-02-14T20:53:03Zoai:ojs.anaisihmt.com:article/455Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:38:14.194343Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
Profil épidémiologique, comportemental et moléculaire des personnes nouvellement diagnostiquées avec le VIH-1 au Cabo Verde
Perfil epidemiológico, comportamental e molecular de indivíduos recém-diagnosticados com VIH-1 em Cabo Verde
title Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
spellingShingle Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
da Veiga Leal, Silvânia
title_short Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
title_full Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
title_fullStr Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
title_full_unstemmed Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
title_sort Epidemiological, behavioural and molecular profile of individuals newly diagnosed with HIV-1 in Cabo Verde
author da Veiga Leal, Silvânia
author_facet da Veiga Leal, Silvânia
de Pina Araújo, Isabel Inês
Pimentel, Victor
Parreira, Ricardo
Gonçalves, Paloma
Pingarilho, Marta
Taveira, Nuno
Barroso Abecasis, Ana
author_role author
author2 de Pina Araújo, Isabel Inês
Pimentel, Victor
Parreira, Ricardo
Gonçalves, Paloma
Pingarilho, Marta
Taveira, Nuno
Barroso Abecasis, Ana
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv da Veiga Leal, Silvânia
de Pina Araújo, Isabel Inês
Pimentel, Victor
Parreira, Ricardo
Gonçalves, Paloma
Pingarilho, Marta
Taveira, Nuno
Barroso Abecasis, Ana
description Introduction: The diagnosis of HIV with Transmitted Drug Resistance Mutations (TDR) limits therapeutic options and consequently complicates the management of HIV-1 cases. Objective: The aim of this study was to describe the molecular epidemiological profile and TDR in individuals newly diagnosed with HIV-1 from 2018 to 2020. Materials and methods: The HIV-1 pol gene was amplified and sequenced using the Sanger method. The analysis of the genomic sequence was performed using the Stanford Calibrated Population Resistance tool to detect transmitted drug resistance mutations, and resistance levels to different drugs were analyzed based on the Stanford HIVdb Program algorithm. Epidemiological and behavioral data were obtained through questionnaires. Results: Out of 176 participants newly diagnosed with HIV-1, 52.3% were male and 47.2% were female, with the majority falling within the age group of 35 to 64 years. Heterosexual contact was the reported mode of transmission in most cases (92.6%). 73 sequences were successfully genotyped. CRF02_AG (41%) was the most prevalent subtype, followed by subtype G (37%) and B (10%). TDR was present in 9.6% (n=7) of cases. The prevalence of mutations associated with Nucleoside Reverse Transcriptase Inhibitors was 2.75%, and for Non-Nucleoside Reverse Transcriptase Inhibitors, it was 9.6% (n=7). K103N (5.5%) and M184V (2.7%) were the most prevalent mutations. The majority of mutations were detected in CRF02_AG strains (57.1%). Conclusion: The high resistance to NNRTIs may compromise the effectiveness of therapeutic regimens, highlighting the need to consider the use of an integrase inhibitor, such as Dolutegravir, as a first-line treatment option, in addition to continuous monitoring to ensure its effectiveness and durability.
publishDate 2024
dc.date.none.fl_str_mv 2024-01-31
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv https://doi.org/10.25761/anaisihmt.455
https://doi.org/10.25761/anaisihmt.455
url https://doi.org/10.25761/anaisihmt.455
dc.language.iso.fl_str_mv por
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dc.relation.none.fl_str_mv http://anaisihmt.com/index.php/ihmt/article/view/455
http://anaisihmt.com/index.php/ihmt/article/view/455/377
dc.rights.driver.fl_str_mv Direitos de Autor (c) 2024 Anais do Instituto de Higiene e Medicina Tropical
http://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Direitos de Autor (c) 2024 Anais do Instituto de Higiene e Medicina Tropical
http://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Universidade Nova de Lisboa
publisher.none.fl_str_mv Universidade Nova de Lisboa
dc.source.none.fl_str_mv Anais do Instituto de Higiene e Medicina Tropical; Vol 22 No 2 (2023): Medicina Tropical e Desenvolvimento Sustentável - 6.º Congresso Nacional de Medicina Tropical; 41-49
Anais do Instituto de Higiene e Medicina Tropical; v. 22 n. 2 (2023): Medicina Tropical e Desenvolvimento Sustentável - 6.º Congresso Nacional de Medicina Tropical; 41-49
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