Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain

Detalhes bibliográficos
Autor(a) principal: Palladino, Claudia
Data de Publicação: 2020
Outros Autores: Ezeonwumelu, Ifeanyi J., Maté, Irene, Borrego, Pedro, Martínez-Román, Paula, Arca-Lafuente, Sonia, Resino, Salvador, Taveira, Nuno, Briz, Verónica
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10451/59104
Resumo: Hepatitis C virus (HCV) infection remains a global health problem. Previously, the prevalence of NS5A resistance-associated substitutions (RASs) to elbasvir, a new direct-acting antiviral (DAA) against the NS5A viral protein was assessed by our group before its introduction into clinical use in Spain. However, the origin, epidemic history, transmission dynamics, diversity and baseline RASs to NS5A direct-acting agents of HCV-GT1a in Spain remain unknown. A nationwide cross-sectional survey of individuals chronically-infected with HCV-G1a and DAAs-naïve was performed. HCV population sequencing, phylogenetic analysis and Bayesian methods were used. GT1a clade II was more prevalent than clade I (82.3% vs. 17.7%; P < 0.001) and older (estimated origin in 1912 vs. 1952). Clade II epidemic is currently declining whereas clade I epidemic has reached equilibrium. A total of 58 single RASs were identified, which account for the moderate level (10%) of baseline resistance observed. When considering the regional data, marked differences were observed, with thirteen regions showing an intermediate level (5–15%) and one a high level (20%) of resistance. Current HCV-GT1a epidemic in Spain is driven by clade I which seem to have different dissemination routes relative to clade II. A moderate level of baseline RASs to NS5A-DAAs with marked differences among regions was observed. Close surveillance of response to treatment with DAAs will be important.
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spelling Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in SpainHepatitis C virus (HCV) infection remains a global health problem. Previously, the prevalence of NS5A resistance-associated substitutions (RASs) to elbasvir, a new direct-acting antiviral (DAA) against the NS5A viral protein was assessed by our group before its introduction into clinical use in Spain. However, the origin, epidemic history, transmission dynamics, diversity and baseline RASs to NS5A direct-acting agents of HCV-GT1a in Spain remain unknown. A nationwide cross-sectional survey of individuals chronically-infected with HCV-G1a and DAAs-naïve was performed. HCV population sequencing, phylogenetic analysis and Bayesian methods were used. GT1a clade II was more prevalent than clade I (82.3% vs. 17.7%; P < 0.001) and older (estimated origin in 1912 vs. 1952). Clade II epidemic is currently declining whereas clade I epidemic has reached equilibrium. A total of 58 single RASs were identified, which account for the moderate level (10%) of baseline resistance observed. When considering the regional data, marked differences were observed, with thirteen regions showing an intermediate level (5–15%) and one a high level (20%) of resistance. Current HCV-GT1a epidemic in Spain is driven by clade I which seem to have different dissemination routes relative to clade II. A moderate level of baseline RASs to NS5A-DAAs with marked differences among regions was observed. Close surveillance of response to treatment with DAAs will be important.The authors thank patients and the Contributing members of the Spanish Group of Chronic Viral Hepatitis (SI1 Appendix) that have participated in this epidemiological survey and the Multidisciplinary Group of Viral Coinfection HIV/Hepatitis (COVIHEP). The Instituto de Salud Carlos III (ISCIII) provided financial support by the Grant (CP13/00098, PI15CIII/00031 and PI18CIII/00020 to VB). CP is financed by national funds via FCT through Norma Transitória—DL57/2016/CP1376/CT0004.Springer NatureRepositório da Universidade de LisboaPalladino, ClaudiaEzeonwumelu, Ifeanyi J.Maté, IreneBorrego, PedroMartínez-Román, PaulaArca-Lafuente, SoniaResino, SalvadorTaveira, NunoBriz, Verónica2023-08-31T13:35:52Z2020-122023-02-03T16:40:01Z2020-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/59104engPalladino C, Ezeonwumelu IJ, Mate-Cano I, Borrego P, Martínez-Román P, Arca-Lafuente S, et al. Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain. Sci Rep [Internet]. 3 de agosto de 2020;10(1):13024. Disponível em: https://www.nature.com/articles/s41598-020-69692-7cv-prod-234458710.1038/s41598-020-69692-7info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-08T17:03:35Zoai:repositorio.ul.pt:10451/59104Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T22:06:42.932929Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
title Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
spellingShingle Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
Palladino, Claudia
title_short Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
title_full Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
title_fullStr Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
title_full_unstemmed Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
title_sort Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain
author Palladino, Claudia
author_facet Palladino, Claudia
Ezeonwumelu, Ifeanyi J.
Maté, Irene
Borrego, Pedro
Martínez-Román, Paula
Arca-Lafuente, Sonia
Resino, Salvador
Taveira, Nuno
Briz, Verónica
author_role author
author2 Ezeonwumelu, Ifeanyi J.
Maté, Irene
Borrego, Pedro
Martínez-Román, Paula
Arca-Lafuente, Sonia
Resino, Salvador
Taveira, Nuno
Briz, Verónica
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Palladino, Claudia
Ezeonwumelu, Ifeanyi J.
Maté, Irene
Borrego, Pedro
Martínez-Román, Paula
Arca-Lafuente, Sonia
Resino, Salvador
Taveira, Nuno
Briz, Verónica
description Hepatitis C virus (HCV) infection remains a global health problem. Previously, the prevalence of NS5A resistance-associated substitutions (RASs) to elbasvir, a new direct-acting antiviral (DAA) against the NS5A viral protein was assessed by our group before its introduction into clinical use in Spain. However, the origin, epidemic history, transmission dynamics, diversity and baseline RASs to NS5A direct-acting agents of HCV-GT1a in Spain remain unknown. A nationwide cross-sectional survey of individuals chronically-infected with HCV-G1a and DAAs-naïve was performed. HCV population sequencing, phylogenetic analysis and Bayesian methods were used. GT1a clade II was more prevalent than clade I (82.3% vs. 17.7%; P < 0.001) and older (estimated origin in 1912 vs. 1952). Clade II epidemic is currently declining whereas clade I epidemic has reached equilibrium. A total of 58 single RASs were identified, which account for the moderate level (10%) of baseline resistance observed. When considering the regional data, marked differences were observed, with thirteen regions showing an intermediate level (5–15%) and one a high level (20%) of resistance. Current HCV-GT1a epidemic in Spain is driven by clade I which seem to have different dissemination routes relative to clade II. A moderate level of baseline RASs to NS5A-DAAs with marked differences among regions was observed. Close surveillance of response to treatment with DAAs will be important.
publishDate 2020
dc.date.none.fl_str_mv 2020-12
2020-12-01T00:00:00Z
2023-08-31T13:35:52Z
2023-02-03T16:40:01Z
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/59104
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Palladino C, Ezeonwumelu IJ, Mate-Cano I, Borrego P, Martínez-Román P, Arca-Lafuente S, et al. Epidemic history and baseline resistance to NS5A-specific direct acting drugs of hepatitis C virus in Spain. Sci Rep [Internet]. 3 de agosto de 2020;10(1):13024. Disponível em: https://www.nature.com/articles/s41598-020-69692-7
cv-prod-2344587
10.1038/s41598-020-69692-7
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