Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.13/4047 |
Resumo: | Carrot is an outcrossing species and levels of gene flow between populations, and even between wild and domesticated relatives, are expected to be high. Cases of natural hybridization and introgression of crops and wild relatives have been reported. Have these events diluted any putative habitat-adapted genotypes? In other words, can we still find a correlation between wild carrot genotypes and regional/local environment? We have chosen to start addressing this question using a member of the alternative oxidase (AOX) gene family. AOX genes seem to be linked to all kinds of abiotic and biotic stress reactions. Wild carrots were sampled in an environmental gradient across Western Europe. This gradient included sampling points with more deviating conditions, such as Sierra de Guadarrama or the central Pyrenees and the French Massif Central. Phylogenetic reconstruction on this molecular marker is to be combined with geographic, climatic, and ecological evidence. So far, the preliminary results suggest the existence of a biogeographical barrier at the Pyrenees, and higher gene diversity than initially expected. From an applied point of view, diversity of functional traits is much more relevant than species diversity. Gene transfer from wild to cultivated plants has contributed to the evolution of crop species. Providing that deterioration of genetic resources and biodiversity loss have not been drastic, gene transfer from wild plants has the potential to further contribute to a (targeted) improvement of cultivars. |
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Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approachDaucus carota L.AOXHabitat-adaptedWild crop relativesHybridization.Escola Superior de Tecnologias e GestãoCarrot is an outcrossing species and levels of gene flow between populations, and even between wild and domesticated relatives, are expected to be high. Cases of natural hybridization and introgression of crops and wild relatives have been reported. Have these events diluted any putative habitat-adapted genotypes? In other words, can we still find a correlation between wild carrot genotypes and regional/local environment? We have chosen to start addressing this question using a member of the alternative oxidase (AOX) gene family. AOX genes seem to be linked to all kinds of abiotic and biotic stress reactions. Wild carrots were sampled in an environmental gradient across Western Europe. This gradient included sampling points with more deviating conditions, such as Sierra de Guadarrama or the central Pyrenees and the French Massif Central. Phylogenetic reconstruction on this molecular marker is to be combined with geographic, climatic, and ecological evidence. So far, the preliminary results suggest the existence of a biogeographical barrier at the Pyrenees, and higher gene diversity than initially expected. From an applied point of view, diversity of functional traits is much more relevant than species diversity. Gene transfer from wild to cultivated plants has contributed to the evolution of crop species. Providing that deterioration of genetic resources and biodiversity loss have not been drastic, gene transfer from wild plants has the potential to further contribute to a (targeted) improvement of cultivars.International Society for Horticultural Science (ISHS)DigitUMaNobre, T.Ragonezi, C.Arnholdt-Schmitt, B.2022-02-04T15:47:28Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.13/4047engNobre, T., Ragonezi, C., & Arnholdt-Schmitt, B(2017). Unravelling wild carrot differentiation in Europe – preliminary data on a candidate gene approach. Acta horticulturae, v. no.1153 , 279-286. doi: 10.17660/ActaHortic.2017.1153.4110.17660/ActaHortic.2017.1153.41info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-19T05:36:26Zoai:digituma.uma.pt:10400.13/4047Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:07:44.052999Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
title |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
spellingShingle |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach Nobre, T. Daucus carota L. AOX Habitat-adapted Wild crop relatives Hybridization . Escola Superior de Tecnologias e Gestão |
title_short |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
title_full |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
title_fullStr |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
title_full_unstemmed |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
title_sort |
Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach |
author |
Nobre, T. |
author_facet |
Nobre, T. Ragonezi, C. Arnholdt-Schmitt, B. |
author_role |
author |
author2 |
Ragonezi, C. Arnholdt-Schmitt, B. |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
DigitUMa |
dc.contributor.author.fl_str_mv |
Nobre, T. Ragonezi, C. Arnholdt-Schmitt, B. |
dc.subject.por.fl_str_mv |
Daucus carota L. AOX Habitat-adapted Wild crop relatives Hybridization . Escola Superior de Tecnologias e Gestão |
topic |
Daucus carota L. AOX Habitat-adapted Wild crop relatives Hybridization . Escola Superior de Tecnologias e Gestão |
description |
Carrot is an outcrossing species and levels of gene flow between populations, and even between wild and domesticated relatives, are expected to be high. Cases of natural hybridization and introgression of crops and wild relatives have been reported. Have these events diluted any putative habitat-adapted genotypes? In other words, can we still find a correlation between wild carrot genotypes and regional/local environment? We have chosen to start addressing this question using a member of the alternative oxidase (AOX) gene family. AOX genes seem to be linked to all kinds of abiotic and biotic stress reactions. Wild carrots were sampled in an environmental gradient across Western Europe. This gradient included sampling points with more deviating conditions, such as Sierra de Guadarrama or the central Pyrenees and the French Massif Central. Phylogenetic reconstruction on this molecular marker is to be combined with geographic, climatic, and ecological evidence. So far, the preliminary results suggest the existence of a biogeographical barrier at the Pyrenees, and higher gene diversity than initially expected. From an applied point of view, diversity of functional traits is much more relevant than species diversity. Gene transfer from wild to cultivated plants has contributed to the evolution of crop species. Providing that deterioration of genetic resources and biodiversity loss have not been drastic, gene transfer from wild plants has the potential to further contribute to a (targeted) improvement of cultivars. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017 2017-01-01T00:00:00Z 2022-02-04T15:47:28Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.13/4047 |
url |
http://hdl.handle.net/10400.13/4047 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Nobre, T., Ragonezi, C., & Arnholdt-Schmitt, B(2017). Unravelling wild carrot differentiation in Europe – preliminary data on a candidate gene approach. Acta horticulturae, v. no.1153 , 279-286. doi: 10.17660/ActaHortic.2017.1153.41 10.17660/ActaHortic.2017.1153.41 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
International Society for Horticultural Science (ISHS) |
publisher.none.fl_str_mv |
International Society for Horticultural Science (ISHS) |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1817553237924904960 |