Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity

Detalhes bibliográficos
Autor(a) principal: Becerra-Rodríguez, Carmen
Data de Publicação: 2021
Outros Autores: Taghouti, Géraldine, Portier, Perrine, Dequin, Sylvie, Casal, Margarida, Paiva, Sandra, Galeote, Virginie
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/76480
Resumo: Fungal Oligopeptide Transporters (Fot) Fot1, Fot2 and Fot3 have been found in <i>Saccharomyces cerevisiae</i> wine strains, but not in strains from other environments. In the <i>S. cerevisiae</i> wine strain EC1118, Fot1 and Fot2 are responsible for a broader range of oligopeptide utilization in comparison with strains not containing any Fot. This leads to better fermentation efficiency and an increased production of desirable organoleptic compounds in wine. Despite the benefits associated with Fot activity in <i>S. cerevisiae</i> within the wine environment, little is known about this family of transporters in yeast. The presence of Fot1, Fot2 and Fot3 in <i>S. cerevisiae</i> wine strains is due to horizontal gene transfer from the yeast <i>Torulaspora microellipsoides</i>, which harbors Fot2Tm, FotX and FotY proteins. Sequence analyses revealed that Fot family members have a high sequence identity in these yeast species. In this work, we aimed to further characterize the different Fot family members in terms of subcellular localization, gene expression in enological fermentation and substrate specificity. Using CRISPR/Cas9, we constructed <i>S. cerevisiae</i> wine strains containing each different Fot as the sole oligopeptide transporter to analyze their oligopeptide preferences by phenotype microarrays. The results of oligopeptide consumption show that Fot counterparts have different di-/tripeptide specificities, suggesting that punctual sequence divergence between <i>FOT</i> genes can be crucial for substrate recognition, binding and transport activity. <i>FOT</i> gene expression levels in different <i>S. cerevisiae</i> wine strains during enological fermentation, together with predicted binding motifs for transcriptional regulators in nitrogen metabolism, indicate that these transporters may be under the control of the Nitrogen Catabolite Repression (NCR) system. Finally, we demonstrated that Fot1 is located in the yeast plasma membrane. This work contributes to a better understanding of this family of oligopeptide transporters, which have demonstrated a key role in the utilization of oligopeptides by <i>S. cerevisiae</i> in enological fermentation.
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spelling Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identityFungal Oligopeptide Transporters (Fot)Oligopeptide transportSaccharomyces cerevisiaePhenotype microarraysGFP labelingScience & TechnologyFungal Oligopeptide Transporters (Fot) Fot1, Fot2 and Fot3 have been found in <i>Saccharomyces cerevisiae</i> wine strains, but not in strains from other environments. In the <i>S. cerevisiae</i> wine strain EC1118, Fot1 and Fot2 are responsible for a broader range of oligopeptide utilization in comparison with strains not containing any Fot. This leads to better fermentation efficiency and an increased production of desirable organoleptic compounds in wine. Despite the benefits associated with Fot activity in <i>S. cerevisiae</i> within the wine environment, little is known about this family of transporters in yeast. The presence of Fot1, Fot2 and Fot3 in <i>S. cerevisiae</i> wine strains is due to horizontal gene transfer from the yeast <i>Torulaspora microellipsoides</i>, which harbors Fot2Tm, FotX and FotY proteins. Sequence analyses revealed that Fot family members have a high sequence identity in these yeast species. In this work, we aimed to further characterize the different Fot family members in terms of subcellular localization, gene expression in enological fermentation and substrate specificity. Using CRISPR/Cas9, we constructed <i>S. cerevisiae</i> wine strains containing each different Fot as the sole oligopeptide transporter to analyze their oligopeptide preferences by phenotype microarrays. The results of oligopeptide consumption show that Fot counterparts have different di-/tripeptide specificities, suggesting that punctual sequence divergence between <i>FOT</i> genes can be crucial for substrate recognition, binding and transport activity. <i>FOT</i> gene expression levels in different <i>S. cerevisiae</i> wine strains during enological fermentation, together with predicted binding motifs for transcriptional regulators in nitrogen metabolism, indicate that these transporters may be under the control of the Nitrogen Catabolite Repression (NCR) system. Finally, we demonstrated that Fot1 is located in the yeast plasma membrane. This work contributes to a better understanding of this family of oligopeptide transporters, which have demonstrated a key role in the utilization of oligopeptides by <i>S. cerevisiae</i> in enological fermentation.This project has received funding from the European Union’s Horizon 2020 Research and Innovation Program under the Marie Skłodowska-Curie Grant Agreement No. 764927Multidisciplinary Digital Publishing Institute (MDPI)Universidade do MinhoBecerra-Rodríguez, CarmenTaghouti, GéraldinePortier, PerrineDequin, SylvieCasal, MargaridaPaiva, SandraGaleote, Virginie2021-11-122021-11-12T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/76480engBecerra-Rodríguez, C.; Taghouti, G.; Portier, P.; Dequin, S.; Casal, M.; Paiva, S.; Galeote, V. Yeast Plasma Membrane Fungal Oligopeptide Transporters Display Distinct Substrate Preferences despite Their High Sequence Identity. J. Fungi 2021, 7, 963. https://doi.org/10.3390/jof71109632309-608X10.3390/jof7110963963https://www.mdpi.com/2309-608X/7/11/963info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T11:55:34Zoai:repositorium.sdum.uminho.pt:1822/76480Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:45:06.686746Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
title Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
spellingShingle Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
Becerra-Rodríguez, Carmen
Fungal Oligopeptide Transporters (Fot)
Oligopeptide transport
Saccharomyces cerevisiae
Phenotype microarrays
GFP labeling
Science & Technology
title_short Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
title_full Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
title_fullStr Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
title_full_unstemmed Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
title_sort Yeast plasma membrane Fungal Oligopeptide Transporters display distinct substrate preferences despite their high sequence identity
author Becerra-Rodríguez, Carmen
author_facet Becerra-Rodríguez, Carmen
Taghouti, Géraldine
Portier, Perrine
Dequin, Sylvie
Casal, Margarida
Paiva, Sandra
Galeote, Virginie
author_role author
author2 Taghouti, Géraldine
Portier, Perrine
Dequin, Sylvie
Casal, Margarida
Paiva, Sandra
Galeote, Virginie
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Becerra-Rodríguez, Carmen
Taghouti, Géraldine
Portier, Perrine
Dequin, Sylvie
Casal, Margarida
Paiva, Sandra
Galeote, Virginie
dc.subject.por.fl_str_mv Fungal Oligopeptide Transporters (Fot)
Oligopeptide transport
Saccharomyces cerevisiae
Phenotype microarrays
GFP labeling
Science & Technology
topic Fungal Oligopeptide Transporters (Fot)
Oligopeptide transport
Saccharomyces cerevisiae
Phenotype microarrays
GFP labeling
Science & Technology
description Fungal Oligopeptide Transporters (Fot) Fot1, Fot2 and Fot3 have been found in <i>Saccharomyces cerevisiae</i> wine strains, but not in strains from other environments. In the <i>S. cerevisiae</i> wine strain EC1118, Fot1 and Fot2 are responsible for a broader range of oligopeptide utilization in comparison with strains not containing any Fot. This leads to better fermentation efficiency and an increased production of desirable organoleptic compounds in wine. Despite the benefits associated with Fot activity in <i>S. cerevisiae</i> within the wine environment, little is known about this family of transporters in yeast. The presence of Fot1, Fot2 and Fot3 in <i>S. cerevisiae</i> wine strains is due to horizontal gene transfer from the yeast <i>Torulaspora microellipsoides</i>, which harbors Fot2Tm, FotX and FotY proteins. Sequence analyses revealed that Fot family members have a high sequence identity in these yeast species. In this work, we aimed to further characterize the different Fot family members in terms of subcellular localization, gene expression in enological fermentation and substrate specificity. Using CRISPR/Cas9, we constructed <i>S. cerevisiae</i> wine strains containing each different Fot as the sole oligopeptide transporter to analyze their oligopeptide preferences by phenotype microarrays. The results of oligopeptide consumption show that Fot counterparts have different di-/tripeptide specificities, suggesting that punctual sequence divergence between <i>FOT</i> genes can be crucial for substrate recognition, binding and transport activity. <i>FOT</i> gene expression levels in different <i>S. cerevisiae</i> wine strains during enological fermentation, together with predicted binding motifs for transcriptional regulators in nitrogen metabolism, indicate that these transporters may be under the control of the Nitrogen Catabolite Repression (NCR) system. Finally, we demonstrated that Fot1 is located in the yeast plasma membrane. This work contributes to a better understanding of this family of oligopeptide transporters, which have demonstrated a key role in the utilization of oligopeptides by <i>S. cerevisiae</i> in enological fermentation.
publishDate 2021
dc.date.none.fl_str_mv 2021-11-12
2021-11-12T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/76480
url http://hdl.handle.net/1822/76480
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Becerra-Rodríguez, C.; Taghouti, G.; Portier, P.; Dequin, S.; Casal, M.; Paiva, S.; Galeote, V. Yeast Plasma Membrane Fungal Oligopeptide Transporters Display Distinct Substrate Preferences despite Their High Sequence Identity. J. Fungi 2021, 7, 963. https://doi.org/10.3390/jof7110963
2309-608X
10.3390/jof7110963
963
https://www.mdpi.com/2309-608X/7/11/963
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute (MDPI)
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute (MDPI)
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
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