A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis

Detalhes bibliográficos
Autor(a) principal: Blanco-Míguez, Aitor
Data de Publicação: 2016
Outros Autores: Gutiérrez-Jácome, Alberto, Fdez-Riverola, Florentino, Lourenço, Anália, Sánchez, Borja
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/42330
Resumo: Supplementary data related to this article can be found at http://dx.doi.org/10.1016/j.fm.2016.06.015.
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spelling A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactisBifidobacterium animalis subsp. lactisPeptidomeSpecific peptidesScience & TechnologySupplementary data related to this article can be found at http://dx.doi.org/10.1016/j.fm.2016.06.015.Bifidobacteria are gut commensal microorganisms belonging to the Actinobacteria group. Some specific strains of Bifidobacterium animalis subsp. lactis are used in functional foods as they are able to exert health-promoting effects in the human host. Due to the limited genetic variability within this subspecies, it is sometimes difficult for a manufacturer to properly track its strain once included in dairy products or functional foods. In this paper, we present a peptidome-based analysis in which the proteomes of a set of B. animalis subsp. lactis strains were digested in silico with human gut endopeptidases. The molecular masses were compared along all the strains to detect strain-specific peptides. These peptides may be interesting towards the development of methodologies for strain identification in the final product.This research was funded by Grant AGL2013-44039-R from the Spanish “Plan Estatal de IþDþI”, and by Grant EM2014/046 from the “Plan Galego de investigaci on, innovaci on e crecemento 2011e2015”. Borja S anchez was recipient of a Ram on y Cajal postdoctoral contract from the Spanish Ministry of Economy and Competitiveness (RYC-2012-10052). This work was also partially funded by the [14VI05] Contract- Programme from the Unixikversity of Vigo and the Agrupamento INBIOMED from DXPCTSUG-FEDER unha maneira de facer Europa (2012/273). The research leading to these results has also received funding from the European Union’s Seventh Framework Programme FP7/REGPOT-2012-2013.1 under grant agreement no 316265, BIOCAPS. This document reflects only the author’s views and the European Union is not liable for any use that may be made of the information contained herein.Academic PressUniversidade do MinhoBlanco-Míguez, AitorGutiérrez-Jácome, AlbertoFdez-Riverola, FlorentinoLourenço, AnáliaSánchez, Borja2016-122016-12-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/42330engBlanco-Míguez, Aitor; Gutiérrez-Jácome, Alberto; Fdez-Riverola, Florentino; Lourenço, Anália; Sánchez, Borja, A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis. Food Microbiology, 60, 137-141, 20161095-99980740-002010.1016/j.fm.2016.06.01527554155http://www.elsevier.com/locate/issn/07400020info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:41:42Zoai:repositorium.sdum.uminho.pt:1822/42330Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:38:44.673916Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
title A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
spellingShingle A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
Blanco-Míguez, Aitor
Bifidobacterium animalis subsp. lactis
Peptidome
Specific peptides
Science & Technology
title_short A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
title_full A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
title_fullStr A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
title_full_unstemmed A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
title_sort A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis
author Blanco-Míguez, Aitor
author_facet Blanco-Míguez, Aitor
Gutiérrez-Jácome, Alberto
Fdez-Riverola, Florentino
Lourenço, Anália
Sánchez, Borja
author_role author
author2 Gutiérrez-Jácome, Alberto
Fdez-Riverola, Florentino
Lourenço, Anália
Sánchez, Borja
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Blanco-Míguez, Aitor
Gutiérrez-Jácome, Alberto
Fdez-Riverola, Florentino
Lourenço, Anália
Sánchez, Borja
dc.subject.por.fl_str_mv Bifidobacterium animalis subsp. lactis
Peptidome
Specific peptides
Science & Technology
topic Bifidobacterium animalis subsp. lactis
Peptidome
Specific peptides
Science & Technology
description Supplementary data related to this article can be found at http://dx.doi.org/10.1016/j.fm.2016.06.015.
publishDate 2016
dc.date.none.fl_str_mv 2016-12
2016-12-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/42330
url http://hdl.handle.net/1822/42330
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Blanco-Míguez, Aitor; Gutiérrez-Jácome, Alberto; Fdez-Riverola, Florentino; Lourenço, Anália; Sánchez, Borja, A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis. Food Microbiology, 60, 137-141, 2016
1095-9998
0740-0020
10.1016/j.fm.2016.06.015
27554155
http://www.elsevier.com/locate/issn/07400020
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Academic Press
publisher.none.fl_str_mv Academic Press
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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