Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)?
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10451/58354 |
Resumo: | Understanding of the evolutionary history of two closely related canid sister taxa, the geographically restricted, arid-adapted Rüppell’s fox (Vulpes rueppellii) and the widespread generalist red fox (Vulpes vulpes), has been hampered by limited sampling in the biogeographically complex region of North Africa and the Middle East. We sequenced mitochondrial DNA (mtDNA) cytochrome b and D-loop fragments from 116 samples for both species and combined these data with previously published sequences, resulting in 459 haplotypes. Obtained phylogenies showed high support for most branches, including for a newly described ‘Palearctic clade’ that includes North African and Asian individuals from both species. All V. rueppellii individuals fell within the Palearctic clade, forming two previously undescribed subclades that were intermingled with, but not shared with V. vulpes. Our robust placement of V. rueppellii within V. vulpes renders the latter paraphyletic. We propose three scenarios that could explain these observations: (1) rapid, recent speciation of V. rueppellii from V. vulpes, (2) incomplete lineage sorting, or (3) ancient divergence followed by introgression and secondary mtDNA similarity. The third scenario is in best agreement with evidence from the fossil record, and morphometric and ecological distinctiveness between the two taxa, and therefore seems most likely. |
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Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)?Understanding of the evolutionary history of two closely related canid sister taxa, the geographically restricted, arid-adapted Rüppell’s fox (Vulpes rueppellii) and the widespread generalist red fox (Vulpes vulpes), has been hampered by limited sampling in the biogeographically complex region of North Africa and the Middle East. We sequenced mitochondrial DNA (mtDNA) cytochrome b and D-loop fragments from 116 samples for both species and combined these data with previously published sequences, resulting in 459 haplotypes. Obtained phylogenies showed high support for most branches, including for a newly described ‘Palearctic clade’ that includes North African and Asian individuals from both species. All V. rueppellii individuals fell within the Palearctic clade, forming two previously undescribed subclades that were intermingled with, but not shared with V. vulpes. Our robust placement of V. rueppellii within V. vulpes renders the latter paraphyletic. We propose three scenarios that could explain these observations: (1) rapid, recent speciation of V. rueppellii from V. vulpes, (2) incomplete lineage sorting, or (3) ancient divergence followed by introgression and secondary mtDNA similarity. The third scenario is in best agreement with evidence from the fossil record, and morphometric and ecological distinctiveness between the two taxa, and therefore seems most likely.Oxford University PressRepositório da Universidade de LisboaBasuony, Ali ESaleh, MostafaSarhan, MoustafaYounes, MahmoudAbdel-Hamid, FouadFernandes, CVercammen, PaulAboshaala, FarajBounaceur, FaridChadwick, Elizabeth AHailer, Frank2023-06-27T17:58:59Z2023-032023-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/58354engAli E Basuony and others, Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)?, Biological Journal of the Linnean Society, Volume 138, Issue 4, April 2023, Pages 453–469, https://doi.org/10.1093/biolinnean/blad00110.1093/biolinnean/blad001info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-11-20T18:22:34Zoai:repositorio.ul.pt:10451/58354Portal AgregadorONGhttps://www.rcaap.pt/oai/openairemluisa.alvim@gmail.comopendoar:71602024-11-20T18:22:34Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
title |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
spellingShingle |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? Basuony, Ali E |
title_short |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
title_full |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
title_fullStr |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
title_full_unstemmed |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
title_sort |
Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)? |
author |
Basuony, Ali E |
author_facet |
Basuony, Ali E Saleh, Mostafa Sarhan, Moustafa Younes, Mahmoud Abdel-Hamid, Fouad Fernandes, C Vercammen, Paul Aboshaala, Faraj Bounaceur, Farid Chadwick, Elizabeth A Hailer, Frank |
author_role |
author |
author2 |
Saleh, Mostafa Sarhan, Moustafa Younes, Mahmoud Abdel-Hamid, Fouad Fernandes, C Vercammen, Paul Aboshaala, Faraj Bounaceur, Farid Chadwick, Elizabeth A Hailer, Frank |
author2_role |
author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório da Universidade de Lisboa |
dc.contributor.author.fl_str_mv |
Basuony, Ali E Saleh, Mostafa Sarhan, Moustafa Younes, Mahmoud Abdel-Hamid, Fouad Fernandes, C Vercammen, Paul Aboshaala, Faraj Bounaceur, Farid Chadwick, Elizabeth A Hailer, Frank |
description |
Understanding of the evolutionary history of two closely related canid sister taxa, the geographically restricted, arid-adapted Rüppell’s fox (Vulpes rueppellii) and the widespread generalist red fox (Vulpes vulpes), has been hampered by limited sampling in the biogeographically complex region of North Africa and the Middle East. We sequenced mitochondrial DNA (mtDNA) cytochrome b and D-loop fragments from 116 samples for both species and combined these data with previously published sequences, resulting in 459 haplotypes. Obtained phylogenies showed high support for most branches, including for a newly described ‘Palearctic clade’ that includes North African and Asian individuals from both species. All V. rueppellii individuals fell within the Palearctic clade, forming two previously undescribed subclades that were intermingled with, but not shared with V. vulpes. Our robust placement of V. rueppellii within V. vulpes renders the latter paraphyletic. We propose three scenarios that could explain these observations: (1) rapid, recent speciation of V. rueppellii from V. vulpes, (2) incomplete lineage sorting, or (3) ancient divergence followed by introgression and secondary mtDNA similarity. The third scenario is in best agreement with evidence from the fossil record, and morphometric and ecological distinctiveness between the two taxa, and therefore seems most likely. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-06-27T17:58:59Z 2023-03 2023-03-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10451/58354 |
url |
http://hdl.handle.net/10451/58354 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Ali E Basuony and others, Paraphyly of the widespread generalist red fox (Vulpes vulpes): introgression rather than recent divergence of the arid-adapted Rüppell’s fox (Vulpes rueppellii)?, Biological Journal of the Linnean Society, Volume 138, Issue 4, April 2023, Pages 453–469, https://doi.org/10.1093/biolinnean/blad001 10.1093/biolinnean/blad001 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Oxford University Press |
publisher.none.fl_str_mv |
Oxford University Press |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
mluisa.alvim@gmail.com |
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