Medical Image Tracking Toolbox

Detalhes bibliográficos
Autor(a) principal: Sandro Queirós, Pedro Morais
Data de Publicação: 2019
Outros Autores: Daniel Barbosa, Jaime C. Fonseca, João L. Vilaça, Jan D'hooge
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/11110/1945
Resumo: Over the years, medical image tracking has gained considerable attention from both medical and research communities due to its widespread utility in a multitude of clinical applications, from functional assessment during diagnosis and therapy planning to structure tracking or image fusion during image-guided interventions. Despite the ever-increasing number of image tracking methods available, most still consist of independent implementations with specific target applications, lacking the versatility to deal with distinct end-goals without the need for methodological tailoring and/or exhaustive tuning of numerous parameters. With this in mind, we have developed the Medical Image Tracking Toolbox (MITT) - a software package designed to ease customization of image tracking solutions in the medical field. While its workflow principles make it suitable to work with 2D or 3D image sequences, its modules offer versatility to set up computationally efficient tracking solutions, even for users with limited programming skills. MITT is implemented in both C/C++ and MATLAB, including several variants of an object-based image tracking algorithm and allowing to track multiple types of objects (i.e. contours, multi-contours, surfaces and multi-surfaces) with several customization features. In this work, the toolbox is presented, its features discussed, and illustrative examples of its usage in the cardiology field provided, demonstrating its versatility, simplicity and time efficiency.
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spelling Medical Image Tracking ToolboxAnatomical affine optical flowimage processing toolboxmedical image tracking toolboxmotion estimationOver the years, medical image tracking has gained considerable attention from both medical and research communities due to its widespread utility in a multitude of clinical applications, from functional assessment during diagnosis and therapy planning to structure tracking or image fusion during image-guided interventions. Despite the ever-increasing number of image tracking methods available, most still consist of independent implementations with specific target applications, lacking the versatility to deal with distinct end-goals without the need for methodological tailoring and/or exhaustive tuning of numerous parameters. With this in mind, we have developed the Medical Image Tracking Toolbox (MITT) - a software package designed to ease customization of image tracking solutions in the medical field. While its workflow principles make it suitable to work with 2D or 3D image sequences, its modules offer versatility to set up computationally efficient tracking solutions, even for users with limited programming skills. MITT is implemented in both C/C++ and MATLAB, including several variants of an object-based image tracking algorithm and allowing to track multiple types of objects (i.e. contours, multi-contours, surfaces and multi-surfaces) with several customization features. In this work, the toolbox is presented, its features discussed, and illustrative examples of its usage in the cardiology field provided, demonstrating its versatility, simplicity and time efficiency.This work was funded by projects “NORTE-01-0145-FEDER-000013” and “NORTE-01-0145-FEDER-024300”, supported by the Northern Portugal Regional Operational Programme (Norte2020), under the Portugal 2020 Partnership Agreement, through the European Regional Development Fund (FEDER), and also by FEDER funds, through the Competitiveness Factors Operational Programme (COMPETE), and by national funds, through the FCT – Fundação para a Ciência e Tecnologia, under the scope of the project POCI-01-0145-FEDER-007038. The authors acknowledge support by FCT and the European Social Found, through Programa Operacional Capital Humano (POCH), in the scope of the PhD grants SFRH/BD/93443/2013 (S. Queirós) and SFRH/BD/95438/2013 (P. Morais).IEEE Transactions on Medical Imaging2020-07-03T09:47:15Z2020-07-03T09:47:15Z2019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/11110/1945oai:ciencipca.ipca.pt:11110/1945enghttp://hdl.handle.net/11110/1945Sandro Queirós, Pedro MoraisDaniel Barbosa, Jaime C. FonsecaJoão L. Vilaça, Jan D'hoogeinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-05T12:53:16Zoai:ciencipca.ipca.pt:11110/1945Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:02:14.019666Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Medical Image Tracking Toolbox
title Medical Image Tracking Toolbox
spellingShingle Medical Image Tracking Toolbox
Sandro Queirós, Pedro Morais
Anatomical affine optical flow
image processing toolbox
medical image tracking toolbox
motion estimation
title_short Medical Image Tracking Toolbox
title_full Medical Image Tracking Toolbox
title_fullStr Medical Image Tracking Toolbox
title_full_unstemmed Medical Image Tracking Toolbox
title_sort Medical Image Tracking Toolbox
author Sandro Queirós, Pedro Morais
author_facet Sandro Queirós, Pedro Morais
Daniel Barbosa, Jaime C. Fonseca
João L. Vilaça, Jan D'hooge
author_role author
author2 Daniel Barbosa, Jaime C. Fonseca
João L. Vilaça, Jan D'hooge
author2_role author
author
dc.contributor.author.fl_str_mv Sandro Queirós, Pedro Morais
Daniel Barbosa, Jaime C. Fonseca
João L. Vilaça, Jan D'hooge
dc.subject.por.fl_str_mv Anatomical affine optical flow
image processing toolbox
medical image tracking toolbox
motion estimation
topic Anatomical affine optical flow
image processing toolbox
medical image tracking toolbox
motion estimation
description Over the years, medical image tracking has gained considerable attention from both medical and research communities due to its widespread utility in a multitude of clinical applications, from functional assessment during diagnosis and therapy planning to structure tracking or image fusion during image-guided interventions. Despite the ever-increasing number of image tracking methods available, most still consist of independent implementations with specific target applications, lacking the versatility to deal with distinct end-goals without the need for methodological tailoring and/or exhaustive tuning of numerous parameters. With this in mind, we have developed the Medical Image Tracking Toolbox (MITT) - a software package designed to ease customization of image tracking solutions in the medical field. While its workflow principles make it suitable to work with 2D or 3D image sequences, its modules offer versatility to set up computationally efficient tracking solutions, even for users with limited programming skills. MITT is implemented in both C/C++ and MATLAB, including several variants of an object-based image tracking algorithm and allowing to track multiple types of objects (i.e. contours, multi-contours, surfaces and multi-surfaces) with several customization features. In this work, the toolbox is presented, its features discussed, and illustrative examples of its usage in the cardiology field provided, demonstrating its versatility, simplicity and time efficiency.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01T00:00:00Z
2020-07-03T09:47:15Z
2020-07-03T09:47:15Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/11110/1945
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url http://hdl.handle.net/11110/1945
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv http://hdl.handle.net/11110/1945
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv IEEE Transactions on Medical Imaging
publisher.none.fl_str_mv IEEE Transactions on Medical Imaging
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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