Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10362/50529 |
Resumo: | In a context of “green” biotechnology the tendency is to increase investment in methods that rely on microrganisms for the production of biological compounds. The use of these methodologies, contrary to those that rely on the use of chemical components, translate into a higher sustainability in the economical, social and environmental sectors. The upstream development is deeply connected with the cultivation of microrganisms expressing all kind of recombinant proteins. Regarding this work, special attention was given to a specific type of recombinant protein, nanofitins. Nanofitins are artificial proteins created through the technique of ribosome display which consists in several cycles of selection with the goal of creating a synthetic protein with affinity to a specific target. The objective in this experimental work was to implement a protocol for the production and purification of a nanofitin at a pilot scale. Regarding upstream analysis, different specific growth rates were tested during fed-batch administration on a 30L bioreactor, as well as operation times and small scale growth conditions were optimized. At upstream it was concluded that the use of a specific growth rate of 0,175h-1 during fed-batch is sufficient to maximize the microbial growth and its biomass production, as well as the use of only one resistance antibiotic, ampicillin, managed to optimize these parameters. At the downstream level different conditions were studied, namely the techniques of ion exchange chromatography and hydrophobic interaction. The technique of tangential flow filtration was also tested, showing that the use of this technique with two cutoffs, 30kDa and 5kDa, followed by a cationic exchange chromatography is the combination of techniques which presented higher productivities with higher purity ratio. To fulfill GMP requirements, the remotion of the content of endotoxins in the final product was also assessed. The use of Sartobind STIC nano successfully removed up to 97% of endotoxins content on the final product. |
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Process development and optimization towards the production of a non-antibody scaffold-based biotherapeuticbiotechnologyupstreamdownstreamnanofitinpharmaceutical industryDomínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e TecnologiasIn a context of “green” biotechnology the tendency is to increase investment in methods that rely on microrganisms for the production of biological compounds. The use of these methodologies, contrary to those that rely on the use of chemical components, translate into a higher sustainability in the economical, social and environmental sectors. The upstream development is deeply connected with the cultivation of microrganisms expressing all kind of recombinant proteins. Regarding this work, special attention was given to a specific type of recombinant protein, nanofitins. Nanofitins are artificial proteins created through the technique of ribosome display which consists in several cycles of selection with the goal of creating a synthetic protein with affinity to a specific target. The objective in this experimental work was to implement a protocol for the production and purification of a nanofitin at a pilot scale. Regarding upstream analysis, different specific growth rates were tested during fed-batch administration on a 30L bioreactor, as well as operation times and small scale growth conditions were optimized. At upstream it was concluded that the use of a specific growth rate of 0,175h-1 during fed-batch is sufficient to maximize the microbial growth and its biomass production, as well as the use of only one resistance antibiotic, ampicillin, managed to optimize these parameters. At the downstream level different conditions were studied, namely the techniques of ion exchange chromatography and hydrophobic interaction. The technique of tangential flow filtration was also tested, showing that the use of this technique with two cutoffs, 30kDa and 5kDa, followed by a cationic exchange chromatography is the combination of techniques which presented higher productivities with higher purity ratio. To fulfill GMP requirements, the remotion of the content of endotoxins in the final product was also assessed. The use of Sartobind STIC nano successfully removed up to 97% of endotoxins content on the final product.Num contexto de biotecnologia “verde” a tendência em investir em métodos que incorporem microrganismos para produção de compostos biológicos é cada vez maior. O uso destas metodologias, ao contrário de metodologias com métodos químicos, traduzem-se numa maior sustentabilidade a nível económico, social e ambiental. O desenvolvimento do upstream está muito relacionado com o cultivo de microrganismos que expressam proteínas recombinantes. No âmbito deste trabalho foi estudado um tipo específico de proteínas recombinantes chamadas nanofitinas. As nanofitinas tratam-se de proteínas geradas pela técnica de ribosome display onde através de diversos ciclos de seleção consegue-se gerar proteínas sintéticas com afinidade para um target. O objetivo deste trabalho experimental foi de implementar um protocolo de produção e purificação de uma nanofitina à escala piloto. No que diz respeito ao upstream foram testadas diferentes taxas específicas de crescimento durante a administração do fed-batch num bioreactor de 30L, assim como otimização de tempos de operação e condições de cultura à pequena escala foram testados. Foi concluído que o uso de uma taxa específica de crescimento de 0,175h-1 durante o fed-batch permite maximizar o crescimento microbiano e biomassa produzida assim como o uso de apenas um antibiótico de resistência, ampicilina, otimiza estes mesmos parâmetros. No downstream foram estudadas condições que permitissem purificar com sucesso a nanofitina, nomeadamente as técnicas de cromatografia de permuta iónica e interação hidrofóbica. Foi também testada a técnica de filtração tangencial, onde foi concluído que a operação sequencial de dois cutoffs diferentes, 30kDa e 5kDa, seguido da técnica de cromatografia de permuta iónica é a metodologia que apresenta produtividades mais elevadas com maior grau de pureza. Visando atingir parâmetros GMP, foi ainda testada a remoção de endotoxinas do produto final. O uso de uma Sartobind STIC nano mostrou remover com sucesso 97% o conteúdo de endotoxinas no produto final.Cunha, AntónioCastro, RuteRUNMatos, Manuel João de Almeida Albuquerque Brandão2018-11-02T14:17:33Z2015-0920152015-09-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/50529porinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:25:29Zoai:run.unl.pt:10362/50529Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:32:19.824358Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
title |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
spellingShingle |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic Matos, Manuel João de Almeida Albuquerque Brandão biotechnology upstream downstream nanofitin pharmaceutical industry Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
title_short |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
title_full |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
title_fullStr |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
title_full_unstemmed |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
title_sort |
Process development and optimization towards the production of a non-antibody scaffold-based biotherapeutic |
author |
Matos, Manuel João de Almeida Albuquerque Brandão |
author_facet |
Matos, Manuel João de Almeida Albuquerque Brandão |
author_role |
author |
dc.contributor.none.fl_str_mv |
Cunha, António Castro, Rute RUN |
dc.contributor.author.fl_str_mv |
Matos, Manuel João de Almeida Albuquerque Brandão |
dc.subject.por.fl_str_mv |
biotechnology upstream downstream nanofitin pharmaceutical industry Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
topic |
biotechnology upstream downstream nanofitin pharmaceutical industry Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
description |
In a context of “green” biotechnology the tendency is to increase investment in methods that rely on microrganisms for the production of biological compounds. The use of these methodologies, contrary to those that rely on the use of chemical components, translate into a higher sustainability in the economical, social and environmental sectors. The upstream development is deeply connected with the cultivation of microrganisms expressing all kind of recombinant proteins. Regarding this work, special attention was given to a specific type of recombinant protein, nanofitins. Nanofitins are artificial proteins created through the technique of ribosome display which consists in several cycles of selection with the goal of creating a synthetic protein with affinity to a specific target. The objective in this experimental work was to implement a protocol for the production and purification of a nanofitin at a pilot scale. Regarding upstream analysis, different specific growth rates were tested during fed-batch administration on a 30L bioreactor, as well as operation times and small scale growth conditions were optimized. At upstream it was concluded that the use of a specific growth rate of 0,175h-1 during fed-batch is sufficient to maximize the microbial growth and its biomass production, as well as the use of only one resistance antibiotic, ampicillin, managed to optimize these parameters. At the downstream level different conditions were studied, namely the techniques of ion exchange chromatography and hydrophobic interaction. The technique of tangential flow filtration was also tested, showing that the use of this technique with two cutoffs, 30kDa and 5kDa, followed by a cationic exchange chromatography is the combination of techniques which presented higher productivities with higher purity ratio. To fulfill GMP requirements, the remotion of the content of endotoxins in the final product was also assessed. The use of Sartobind STIC nano successfully removed up to 97% of endotoxins content on the final product. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-09 2015 2015-09-01T00:00:00Z 2018-11-02T14:17:33Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/masterThesis |
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masterThesis |
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publishedVersion |
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http://hdl.handle.net/10362/50529 |
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http://hdl.handle.net/10362/50529 |
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por |
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openAccess |
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