Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry

Detalhes bibliográficos
Autor(a) principal: Nogueira, Rita Ferreira
Data de Publicação: 2013
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.14/15913
Resumo: Fluoroquinolones are bactericidal drugs which have been widely used due to their great activity and wide spectrum namely against gram negative bacteria like Enterobacteriacea. Multidrug resistance is a rising health concern worldwide and increased AcrAB-TolC efflux pump expression has been documented in association with resistance to fluoroquinolones. The classic susceptibility methods are based on growth in the presence of antimicrobial drugs which takes at least 24 to 48 hours and empiric therapy usually is used to overcome this delayed answer. A rapid assay was created to determine the susceptibility of gram negative bacteria to ciprofloxacin and levofloxacin; facing a resistant phenotype, another protocol was developed to detect the presence of efflux pump over-expression. These are rapid and accurate protocols based on flow cytometry that demonstrated great advantages for clinical Microbiology. Sixty two resistant and susceptible clinical isolates of Enterobacteriaceae were tested for ciprofloxacin and fifty three were tested for levofloxacin, previously evaluated by Vitek2®. Genetically modified E. coli K12 with AcrAB-TolC efflux system inactivated, over-expressed and wild-type were used as efflux controls. For susceptibility profile, the cells were incubated with antimicrobial breakpoints according to CLSI, then fixed with ethanol 70% (v/v) and stained with SYBR-Green I, a nucleic acid probe. CFU assays were performed before flow cytometric analysis. For efflux activity study thirty resistant strains were tested. Bacteria were diluted in PBS supplemented with glucose and subinhibitory concentrations of ciprofloxacin and stained with Ethidium Bromide. In parallel the same strains were incubated with chlorpromazine, a pump inhibitor, and the protocol repeated. Flow cytometric analysis was performed in FL1 (520 nm) and FL3 (600 nm) for susceptibility phenotype and efflux determination, respectively. In the susceptibility test, susceptible strains showed a decrease in the fluorescence intensity compared to the control; conversely, resistant strains maintained approximate values, even after incubation with high concentrations of the drugs. Correlation between conventional CFU assay and flow cytometry was successfully achieved. In the efflux assay, a comparison between the fluorescence intensity with and without chlorpromazine was done. When it decreased there was AcrAB-TolC over-expression, if the values maintained there wasn’t. Flow cytometry demonstrated to be an excellent approach to evaluate the resistance to fluoroquinolones and the responsibility of efflux pumps on such resistance.
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spelling Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometryDetecção da resistência e actividade das bombas de efluxo às fluoroquinolonas por citometria de fluxoDomínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e TecnologiasFluoroquinolones are bactericidal drugs which have been widely used due to their great activity and wide spectrum namely against gram negative bacteria like Enterobacteriacea. Multidrug resistance is a rising health concern worldwide and increased AcrAB-TolC efflux pump expression has been documented in association with resistance to fluoroquinolones. The classic susceptibility methods are based on growth in the presence of antimicrobial drugs which takes at least 24 to 48 hours and empiric therapy usually is used to overcome this delayed answer. A rapid assay was created to determine the susceptibility of gram negative bacteria to ciprofloxacin and levofloxacin; facing a resistant phenotype, another protocol was developed to detect the presence of efflux pump over-expression. These are rapid and accurate protocols based on flow cytometry that demonstrated great advantages for clinical Microbiology. Sixty two resistant and susceptible clinical isolates of Enterobacteriaceae were tested for ciprofloxacin and fifty three were tested for levofloxacin, previously evaluated by Vitek2®. Genetically modified E. coli K12 with AcrAB-TolC efflux system inactivated, over-expressed and wild-type were used as efflux controls. For susceptibility profile, the cells were incubated with antimicrobial breakpoints according to CLSI, then fixed with ethanol 70% (v/v) and stained with SYBR-Green I, a nucleic acid probe. CFU assays were performed before flow cytometric analysis. For efflux activity study thirty resistant strains were tested. Bacteria were diluted in PBS supplemented with glucose and subinhibitory concentrations of ciprofloxacin and stained with Ethidium Bromide. In parallel the same strains were incubated with chlorpromazine, a pump inhibitor, and the protocol repeated. Flow cytometric analysis was performed in FL1 (520 nm) and FL3 (600 nm) for susceptibility phenotype and efflux determination, respectively. In the susceptibility test, susceptible strains showed a decrease in the fluorescence intensity compared to the control; conversely, resistant strains maintained approximate values, even after incubation with high concentrations of the drugs. Correlation between conventional CFU assay and flow cytometry was successfully achieved. In the efflux assay, a comparison between the fluorescence intensity with and without chlorpromazine was done. When it decreased there was AcrAB-TolC over-expression, if the values maintained there wasn’t. Flow cytometry demonstrated to be an excellent approach to evaluate the resistance to fluoroquinolones and the responsibility of efflux pumps on such resistance.As fluoroquinolonas são fármacos bactericidas amplamente utilizadas devido à sua elevada actividade e largo espectro nomeadamente contra bactérias gram negativo como é o caso das Enterobactereaceae. A resistência a antibacterianos é um tema preocupante a nível mundial. Os métodos de susceptibilidade clássicos baseiam-se no crescimento bacteriano na presença de antibacterianos, cujos resultados demoram pelo menos 24 a 48 horas a obter, sendo muitas vezes necessário recorrer a terapia empírica. Foi criado um teste rápido para determinar a susceptibilidade de bactérias gram negativo à ciprofloxacina e levofloxacina; no caso de fenótipos resistentes foi desenvolvido um outro protocolo para detectar a presença de sobre-expressão de bombas de efluxo, um mecanismo de defesa bacteriano bem documentado. Tratam-se de testes rápidos e precisos que utilizam a citometria de fluxo e demonstraram grandes vantagens para a Microbiologia clínica. Sessenta e dois isolados clínicos de Enterobactereaceae foram testados para a ciprofloxacina e cinquenta e três para a levofloxacina, previamente avaliados pelo sistema Vitek2®. E. coli K12 geneticamente modificadas com o sistema de efluxo AcrAB-TolC inactivado, sobre-expresso e wild-type foram utilizadas como controlos de efluxo. Para o perfil de susceptibilidade, as células foram incubadas com os breakpoints fornecidos pelo CLSI, em seguida fixadas com etanol 70% (v/v) e marcadas com SYBR-Green I, uma sonda de ácidos nucleicos. A contagem de UFC foi realizada antes da análise citométrica. Para o estudo do efluxo, trinta isolados foram estudados onde as células são diluídas em PBS suplementado com glucose e concentrações subinibitórias de ciprofloxacina e marcadas com brometo de etídio. Em paralelo, as mesmas estirpes são incubadas com clorpromazina, um inibidor de efluxo, e o protocolo repetido. A análise citométrica foi realizada em FL1 (520 nm) e FL3 (600 nm) para a avaliação de susceptibilidade e a determinação do efluxo, respectivamente. As estirpes susceptíveis incubadas com os antibacterianos demonstraram uma diminuição da intensidade de fluorescência comparando com as não tratadas. As estirpes resistentes mantiveram valores aproximados, mesmo após incubação com altas concentrações de fármaco. Verificou-se correlação entre a contagem de UFC e a citometria de fluxo. Para o ensaio de efluxo, comparou-se a intensidade de fluorescência com e sem clorpromazina. Nos casos de sobreexpressão da bomba de efluxo AcrAB-TolC a intensidade de fluorescência diminuiu. A citometria de fluxo demonstrou ser uma excelente ferramenta para avaliar a resistência às fluoroquinolonas e a responsabilidade do efluxo nessa mesma resistência.Vaz, Cidália PinaVeritati - Repositório Institucional da Universidade Católica PortuguesaNogueira, Rita Ferreira2014-12-10T14:30:29Z2014-03-1920132014-03-19T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10400.14/15913TID:202728145enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-14T01:35:04Zoai:repositorio.ucp.pt:10400.14/15913Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:13:14.268793Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
Detecção da resistência e actividade das bombas de efluxo às fluoroquinolonas por citometria de fluxo
title Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
spellingShingle Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
Nogueira, Rita Ferreira
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
title_short Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
title_full Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
title_fullStr Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
title_full_unstemmed Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
title_sort Detection of fluoroquinolone resistance and efflux pumps activity by flow cytometry
author Nogueira, Rita Ferreira
author_facet Nogueira, Rita Ferreira
author_role author
dc.contributor.none.fl_str_mv Vaz, Cidália Pina
Veritati - Repositório Institucional da Universidade Católica Portuguesa
dc.contributor.author.fl_str_mv Nogueira, Rita Ferreira
dc.subject.por.fl_str_mv Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
topic Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
description Fluoroquinolones are bactericidal drugs which have been widely used due to their great activity and wide spectrum namely against gram negative bacteria like Enterobacteriacea. Multidrug resistance is a rising health concern worldwide and increased AcrAB-TolC efflux pump expression has been documented in association with resistance to fluoroquinolones. The classic susceptibility methods are based on growth in the presence of antimicrobial drugs which takes at least 24 to 48 hours and empiric therapy usually is used to overcome this delayed answer. A rapid assay was created to determine the susceptibility of gram negative bacteria to ciprofloxacin and levofloxacin; facing a resistant phenotype, another protocol was developed to detect the presence of efflux pump over-expression. These are rapid and accurate protocols based on flow cytometry that demonstrated great advantages for clinical Microbiology. Sixty two resistant and susceptible clinical isolates of Enterobacteriaceae were tested for ciprofloxacin and fifty three were tested for levofloxacin, previously evaluated by Vitek2®. Genetically modified E. coli K12 with AcrAB-TolC efflux system inactivated, over-expressed and wild-type were used as efflux controls. For susceptibility profile, the cells were incubated with antimicrobial breakpoints according to CLSI, then fixed with ethanol 70% (v/v) and stained with SYBR-Green I, a nucleic acid probe. CFU assays were performed before flow cytometric analysis. For efflux activity study thirty resistant strains were tested. Bacteria were diluted in PBS supplemented with glucose and subinhibitory concentrations of ciprofloxacin and stained with Ethidium Bromide. In parallel the same strains were incubated with chlorpromazine, a pump inhibitor, and the protocol repeated. Flow cytometric analysis was performed in FL1 (520 nm) and FL3 (600 nm) for susceptibility phenotype and efflux determination, respectively. In the susceptibility test, susceptible strains showed a decrease in the fluorescence intensity compared to the control; conversely, resistant strains maintained approximate values, even after incubation with high concentrations of the drugs. Correlation between conventional CFU assay and flow cytometry was successfully achieved. In the efflux assay, a comparison between the fluorescence intensity with and without chlorpromazine was done. When it decreased there was AcrAB-TolC over-expression, if the values maintained there wasn’t. Flow cytometry demonstrated to be an excellent approach to evaluate the resistance to fluoroquinolones and the responsibility of efflux pumps on such resistance.
publishDate 2013
dc.date.none.fl_str_mv 2013
2014-12-10T14:30:29Z
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