Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan

Detalhes bibliográficos
Autor(a) principal: Guerreiro, Isabel
Data de Publicação: 2016
Outros Autores: Gitto, Sandra, Novoa, Ana, Codourey, Julien, Nguyen Huynh, Thi Hanh, Gonzalez, Federico, Milinkovitch, Michel C, Mallo, Moises, Duboule, Denis
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/685
Resumo: Within land vertebrate species, snakes display extreme variations in their body plan, characterized by the absence of limbs and an elongated morphology. Such a particular interpretation of the basic vertebrate body architecture has often been associated with changes in the function or regulation of Hox genes. Here, we use an interspecies comparative approach to investigate different regulatory aspects at the snake HoxD locus. We report that, unlike in other vertebrates, snake mesoderm-specific enhancers are mostly located within the HoxD cluster itself rather than outside. In addition, despite both the absence of limbs and an altered Hoxd gene regulation in external genitalia, the limb-associated bimodal HoxD chromatin structure is maintained at the snake locus. Finally, we show that snake and mouse orthologous enhancer sequences can display distinct expression specificities. These results show that vertebrate morphological evolution likely involved extensive reorganisation at Hox loci, yet within a generally conserved regulatory framework.
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spelling Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plandevelopmental biologyevolutionary biologygenomicsmousereptilessnakessquamatastem cellsWithin land vertebrate species, snakes display extreme variations in their body plan, characterized by the absence of limbs and an elongated morphology. Such a particular interpretation of the basic vertebrate body architecture has often been associated with changes in the function or regulation of Hox genes. Here, we use an interspecies comparative approach to investigate different regulatory aspects at the snake HoxD locus. We report that, unlike in other vertebrates, snake mesoderm-specific enhancers are mostly located within the HoxD cluster itself rather than outside. In addition, despite both the absence of limbs and an altered Hoxd gene regulation in external genitalia, the limb-associated bimodal HoxD chromatin structure is maintained at the snake locus. Finally, we show that snake and mouse orthologous enhancer sequences can display distinct expression specificities. These results show that vertebrate morphological evolution likely involved extensive reorganisation at Hox loci, yet within a generally conserved regulatory framework.Fundação para a Ciência e Tecnologia grant: (PTDB/BEX-BID/0899/2014); Schweizerischer Nationalfonds zur Forderung der Wissenschaftlichen Forschung grant: (310030B_138662); Claraz Foundation; Université de Genève; Instituto Federal de Educação Ciência e Tecnologia do Espírito Santo.eLife Sciences PublicationsARCAGuerreiro, IsabelGitto, SandraNovoa, AnaCodourey, JulienNguyen Huynh, Thi HanhGonzalez, FedericoMilinkovitch, Michel CMallo, MoisesDuboule, Denis2016-08-11T16:23:40Z2016-08-012016-08-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.7/685engeLife 2016;5:e1608710.7554/eLife.16087info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:35:04Zoai:arca.igc.gulbenkian.pt:10400.7/685Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:55.223953Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
title Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
spellingShingle Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
Guerreiro, Isabel
developmental biology
evolutionary biology
genomics
mouse
reptiles
snakes
squamata
stem cells
title_short Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
title_full Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
title_fullStr Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
title_full_unstemmed Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
title_sort Reorganisation ofHoxdregulatory landscapes during the evolution of a snake-like body plan
author Guerreiro, Isabel
author_facet Guerreiro, Isabel
Gitto, Sandra
Novoa, Ana
Codourey, Julien
Nguyen Huynh, Thi Hanh
Gonzalez, Federico
Milinkovitch, Michel C
Mallo, Moises
Duboule, Denis
author_role author
author2 Gitto, Sandra
Novoa, Ana
Codourey, Julien
Nguyen Huynh, Thi Hanh
Gonzalez, Federico
Milinkovitch, Michel C
Mallo, Moises
Duboule, Denis
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Guerreiro, Isabel
Gitto, Sandra
Novoa, Ana
Codourey, Julien
Nguyen Huynh, Thi Hanh
Gonzalez, Federico
Milinkovitch, Michel C
Mallo, Moises
Duboule, Denis
dc.subject.por.fl_str_mv developmental biology
evolutionary biology
genomics
mouse
reptiles
snakes
squamata
stem cells
topic developmental biology
evolutionary biology
genomics
mouse
reptiles
snakes
squamata
stem cells
description Within land vertebrate species, snakes display extreme variations in their body plan, characterized by the absence of limbs and an elongated morphology. Such a particular interpretation of the basic vertebrate body architecture has often been associated with changes in the function or regulation of Hox genes. Here, we use an interspecies comparative approach to investigate different regulatory aspects at the snake HoxD locus. We report that, unlike in other vertebrates, snake mesoderm-specific enhancers are mostly located within the HoxD cluster itself rather than outside. In addition, despite both the absence of limbs and an altered Hoxd gene regulation in external genitalia, the limb-associated bimodal HoxD chromatin structure is maintained at the snake locus. Finally, we show that snake and mouse orthologous enhancer sequences can display distinct expression specificities. These results show that vertebrate morphological evolution likely involved extensive reorganisation at Hox loci, yet within a generally conserved regulatory framework.
publishDate 2016
dc.date.none.fl_str_mv 2016-08-11T16:23:40Z
2016-08-01
2016-08-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/685
url http://hdl.handle.net/10400.7/685
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv eLife 2016;5:e16087
10.7554/eLife.16087
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv eLife Sciences Publications
publisher.none.fl_str_mv eLife Sciences Publications
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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