A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.21/13861 |
Resumo: | Data generated by the rapidly evolving human biomonitoring (HBM) programs are providing invaluable opportunities to support and advance regulatory risk assessment and management of chemicals in occupational and environmental health domains. However, heterogeneity across studies, in terms of design, terminology, biomarker nomenclature, and data formats, limits our capacity to compare and integrate data sets retrospectively (reuse). Registration of HBM studies is common for clinical trials; however, the study designs and resulting data collections cannot be traced easily. We argue that an HBM Global Registry Framework (HBM GRF) could be the solution to several challenges hampering the (re)use of HBM (meta)data. The aim is to develop a global, host-independent HBM registry framework based on the use of harmonized open-access protocol templates from designing, undertaking an HBM study to the use and possible reuse of the resulting HBM (meta)data. This framework should apply FAIR (Findable, Accessible, Interoperable, and Reusable) principles as a core data management strategy to enable the (re)use of HBM (meta)data to its full potential through the data value chain. Moreover, we believe that the implementation of FAIR principles is a fundamental enabler for digital transformation within environmental health. The HBM GRF would encompass internationally harmonized and agreed open access templates for HBM study protocols, structured web-based functionalities to deposit, find, and access harmonized protocols of HBM studies. Registration of HBM studies using the HBM GRF is anticipated to increase the FAIRness of the resulting (meta)data. It is also considered that the harmonization of existing data sets could be performed retrospectively. As a consequence, data wrangling activities to make data ready for analysis will be minimized. In addition, this framework would enable the HBM (inter)national community to trace new HBM studies already in the planning phase and their results once finalized. The HBM GRF could also serve as a platform enhancing communication between scientists, risk assessors, and risk managers/policymakers. The planned European Partnership for the Assessment of Risk from Chemicals (PARC) works along these lines, based on the experience obtained in previous joint European initiatives. Therefore, PARC could very well bring the first demonstration of the first essential functionalities within the development of the HBM GRF. |
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A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principlesData governanceData value chainHarmonisationHuman biomonitoringRegistryRegulatory risk assessmentBiological monitoringEnvironmental healthFAIR principlesMetadataData generated by the rapidly evolving human biomonitoring (HBM) programs are providing invaluable opportunities to support and advance regulatory risk assessment and management of chemicals in occupational and environmental health domains. However, heterogeneity across studies, in terms of design, terminology, biomarker nomenclature, and data formats, limits our capacity to compare and integrate data sets retrospectively (reuse). Registration of HBM studies is common for clinical trials; however, the study designs and resulting data collections cannot be traced easily. We argue that an HBM Global Registry Framework (HBM GRF) could be the solution to several challenges hampering the (re)use of HBM (meta)data. The aim is to develop a global, host-independent HBM registry framework based on the use of harmonized open-access protocol templates from designing, undertaking an HBM study to the use and possible reuse of the resulting HBM (meta)data. This framework should apply FAIR (Findable, Accessible, Interoperable, and Reusable) principles as a core data management strategy to enable the (re)use of HBM (meta)data to its full potential through the data value chain. Moreover, we believe that the implementation of FAIR principles is a fundamental enabler for digital transformation within environmental health. The HBM GRF would encompass internationally harmonized and agreed open access templates for HBM study protocols, structured web-based functionalities to deposit, find, and access harmonized protocols of HBM studies. Registration of HBM studies using the HBM GRF is anticipated to increase the FAIRness of the resulting (meta)data. It is also considered that the harmonization of existing data sets could be performed retrospectively. As a consequence, data wrangling activities to make data ready for analysis will be minimized. In addition, this framework would enable the HBM (inter)national community to trace new HBM studies already in the planning phase and their results once finalized. The HBM GRF could also serve as a platform enhancing communication between scientists, risk assessors, and risk managers/policymakers. The planned European Partnership for the Assessment of Risk from Chemicals (PARC) works along these lines, based on the experience obtained in previous joint European initiatives. Therefore, PARC could very well bring the first demonstration of the first essential functionalities within the development of the HBM GRF.ElsevierRCIPLZare Jeddi, MaryamVirgolino, AnaFantke, PeterHopf, Nancy B.Galea, Karen S.Remy, SylvieViegas, SusanaMustieles, VicenteFernandez, Mariana F.von Goetz, NatalieVicente, Joana LoboSlobodnik, JaroslavRambaud, LoïcDenys, SébastienSt-Amand, AnnieNakayama, Shoji F.Santonen, TiinaBarouki, RobertPasanen-Kase, RobertMol, Hans G.J.Vermeire, TheoJones, KateSilva, Maria JoãoLouro, Henriquetavan der Voet, HilkoDuca, Radu-CorneliuVerhagen, HansCanova, Cristinavan Klaveren, JacobKolossa-Gehring, MarikeBessems, Jos2021-10-12T09:55:26Z2021-092021-09-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.21/13861engZare Jeddi M, Virgolino A, Fantke P, Hopf N, Galea KS, Viegas S, et al. A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles. Int J Hyg Environ Health. 2021;238:113826.10.1016/j.ijheh.2021.113826info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-03T10:09:16Zoai:repositorio.ipl.pt:10400.21/13861Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:21:44.328936Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
title |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
spellingShingle |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles Zare Jeddi, Maryam Data governance Data value chain Harmonisation Human biomonitoring Registry Regulatory risk assessment Biological monitoring Environmental health FAIR principles Metadata |
title_short |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
title_full |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
title_fullStr |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
title_full_unstemmed |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
title_sort |
A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles |
author |
Zare Jeddi, Maryam |
author_facet |
Zare Jeddi, Maryam Virgolino, Ana Fantke, Peter Hopf, Nancy B. Galea, Karen S. Remy, Sylvie Viegas, Susana Mustieles, Vicente Fernandez, Mariana F. von Goetz, Natalie Vicente, Joana Lobo Slobodnik, Jaroslav Rambaud, Loïc Denys, Sébastien St-Amand, Annie Nakayama, Shoji F. Santonen, Tiina Barouki, Robert Pasanen-Kase, Robert Mol, Hans G.J. Vermeire, Theo Jones, Kate Silva, Maria João Louro, Henriqueta van der Voet, Hilko Duca, Radu-Corneliu Verhagen, Hans Canova, Cristina van Klaveren, Jacob Kolossa-Gehring, Marike Bessems, Jos |
author_role |
author |
author2 |
Virgolino, Ana Fantke, Peter Hopf, Nancy B. Galea, Karen S. Remy, Sylvie Viegas, Susana Mustieles, Vicente Fernandez, Mariana F. von Goetz, Natalie Vicente, Joana Lobo Slobodnik, Jaroslav Rambaud, Loïc Denys, Sébastien St-Amand, Annie Nakayama, Shoji F. Santonen, Tiina Barouki, Robert Pasanen-Kase, Robert Mol, Hans G.J. Vermeire, Theo Jones, Kate Silva, Maria João Louro, Henriqueta van der Voet, Hilko Duca, Radu-Corneliu Verhagen, Hans Canova, Cristina van Klaveren, Jacob Kolossa-Gehring, Marike Bessems, Jos |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
RCIPL |
dc.contributor.author.fl_str_mv |
Zare Jeddi, Maryam Virgolino, Ana Fantke, Peter Hopf, Nancy B. Galea, Karen S. Remy, Sylvie Viegas, Susana Mustieles, Vicente Fernandez, Mariana F. von Goetz, Natalie Vicente, Joana Lobo Slobodnik, Jaroslav Rambaud, Loïc Denys, Sébastien St-Amand, Annie Nakayama, Shoji F. Santonen, Tiina Barouki, Robert Pasanen-Kase, Robert Mol, Hans G.J. Vermeire, Theo Jones, Kate Silva, Maria João Louro, Henriqueta van der Voet, Hilko Duca, Radu-Corneliu Verhagen, Hans Canova, Cristina van Klaveren, Jacob Kolossa-Gehring, Marike Bessems, Jos |
dc.subject.por.fl_str_mv |
Data governance Data value chain Harmonisation Human biomonitoring Registry Regulatory risk assessment Biological monitoring Environmental health FAIR principles Metadata |
topic |
Data governance Data value chain Harmonisation Human biomonitoring Registry Regulatory risk assessment Biological monitoring Environmental health FAIR principles Metadata |
description |
Data generated by the rapidly evolving human biomonitoring (HBM) programs are providing invaluable opportunities to support and advance regulatory risk assessment and management of chemicals in occupational and environmental health domains. However, heterogeneity across studies, in terms of design, terminology, biomarker nomenclature, and data formats, limits our capacity to compare and integrate data sets retrospectively (reuse). Registration of HBM studies is common for clinical trials; however, the study designs and resulting data collections cannot be traced easily. We argue that an HBM Global Registry Framework (HBM GRF) could be the solution to several challenges hampering the (re)use of HBM (meta)data. The aim is to develop a global, host-independent HBM registry framework based on the use of harmonized open-access protocol templates from designing, undertaking an HBM study to the use and possible reuse of the resulting HBM (meta)data. This framework should apply FAIR (Findable, Accessible, Interoperable, and Reusable) principles as a core data management strategy to enable the (re)use of HBM (meta)data to its full potential through the data value chain. Moreover, we believe that the implementation of FAIR principles is a fundamental enabler for digital transformation within environmental health. The HBM GRF would encompass internationally harmonized and agreed open access templates for HBM study protocols, structured web-based functionalities to deposit, find, and access harmonized protocols of HBM studies. Registration of HBM studies using the HBM GRF is anticipated to increase the FAIRness of the resulting (meta)data. It is also considered that the harmonization of existing data sets could be performed retrospectively. As a consequence, data wrangling activities to make data ready for analysis will be minimized. In addition, this framework would enable the HBM (inter)national community to trace new HBM studies already in the planning phase and their results once finalized. The HBM GRF could also serve as a platform enhancing communication between scientists, risk assessors, and risk managers/policymakers. The planned European Partnership for the Assessment of Risk from Chemicals (PARC) works along these lines, based on the experience obtained in previous joint European initiatives. Therefore, PARC could very well bring the first demonstration of the first essential functionalities within the development of the HBM GRF. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-10-12T09:55:26Z 2021-09 2021-09-01T00:00:00Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.21/13861 |
url |
http://hdl.handle.net/10400.21/13861 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Zare Jeddi M, Virgolino A, Fantke P, Hopf N, Galea KS, Viegas S, et al. A human biomonitoring (HBM) Global Registry Framework: further advancement of HBM research following the FAIR principles. Int J Hyg Environ Health. 2021;238:113826. 10.1016/j.ijheh.2021.113826 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1817552139686248448 |