Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10316/103347 https://doi.org/10.3390/jpm12050704 |
Resumo: | The purpose of this study was to classify Huntington's disease (HD) stage using support vector machines and measures derived from T1- and diffusion-weighted imaging. The effects of feature selection approach and combination of imaging modalities are assessed. Fourteen premanifest-HD individuals (Pre-HD; on average > 20 years from estimated disease onset), eleven early-manifest HD (Early-HD) patients, and eighteen healthy controls (HC) participated in the study. We compared three feature selection approaches: (i) whole-brain segmented grey matter (GM; voxel-based measure) or fractional anisotropy (FA) values; (ii) GM or FA values from subcortical regions-of-interest (caudate, putamen, pallidum); and (iii) automated selection of GM or FA values with the algorithm Relief-F. We assessed single- and multi-kernel approaches to classify combined GM and FA measures. Significant classifications were achieved between Early-HD and Pre-HD or HC individuals (accuracy: generally, 85% to 95%), and between Pre-HD and controls for the feature FA of the caudate ROI (74% accuracy). The combination of GM and FA measures did not result in higher performances. We demonstrate evidence on the high sensitivity of FA for the classification of the earliest Pre-HD stages, and successful distinction between HD stages. |
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Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted ImagingHuntington’s diseasegrey matter densityfractional anisotropyclassificationsupport vector machinebasal gangliaThe purpose of this study was to classify Huntington's disease (HD) stage using support vector machines and measures derived from T1- and diffusion-weighted imaging. The effects of feature selection approach and combination of imaging modalities are assessed. Fourteen premanifest-HD individuals (Pre-HD; on average > 20 years from estimated disease onset), eleven early-manifest HD (Early-HD) patients, and eighteen healthy controls (HC) participated in the study. We compared three feature selection approaches: (i) whole-brain segmented grey matter (GM; voxel-based measure) or fractional anisotropy (FA) values; (ii) GM or FA values from subcortical regions-of-interest (caudate, putamen, pallidum); and (iii) automated selection of GM or FA values with the algorithm Relief-F. We assessed single- and multi-kernel approaches to classify combined GM and FA measures. Significant classifications were achieved between Early-HD and Pre-HD or HC individuals (accuracy: generally, 85% to 95%), and between Pre-HD and controls for the feature FA of the caudate ROI (74% accuracy). The combination of GM and FA measures did not result in higher performances. We demonstrate evidence on the high sensitivity of FA for the classification of the earliest Pre-HD stages, and successful distinction between HD stages.2022-04-28info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/103347http://hdl.handle.net/10316/103347https://doi.org/10.3390/jpm12050704eng2075-4426Lavrador, Rui Filipe DavidJúlio, FilipaJanuário, CristinaCastelo Branco, MiguelCaetano, Ginainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-08T21:33:47Zoai:estudogeral.uc.pt:10316/103347Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:20:12.098796Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
title |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
spellingShingle |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging Lavrador, Rui Filipe David Huntington’s disease grey matter density fractional anisotropy classification support vector machine basal ganglia |
title_short |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
title_full |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
title_fullStr |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
title_full_unstemmed |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
title_sort |
Classification of Huntington's Disease Stage with Features Derived from Structural and Diffusion-Weighted Imaging |
author |
Lavrador, Rui Filipe David |
author_facet |
Lavrador, Rui Filipe David Júlio, Filipa Januário, Cristina Castelo Branco, Miguel Caetano, Gina |
author_role |
author |
author2 |
Júlio, Filipa Januário, Cristina Castelo Branco, Miguel Caetano, Gina |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Lavrador, Rui Filipe David Júlio, Filipa Januário, Cristina Castelo Branco, Miguel Caetano, Gina |
dc.subject.por.fl_str_mv |
Huntington’s disease grey matter density fractional anisotropy classification support vector machine basal ganglia |
topic |
Huntington’s disease grey matter density fractional anisotropy classification support vector machine basal ganglia |
description |
The purpose of this study was to classify Huntington's disease (HD) stage using support vector machines and measures derived from T1- and diffusion-weighted imaging. The effects of feature selection approach and combination of imaging modalities are assessed. Fourteen premanifest-HD individuals (Pre-HD; on average > 20 years from estimated disease onset), eleven early-manifest HD (Early-HD) patients, and eighteen healthy controls (HC) participated in the study. We compared three feature selection approaches: (i) whole-brain segmented grey matter (GM; voxel-based measure) or fractional anisotropy (FA) values; (ii) GM or FA values from subcortical regions-of-interest (caudate, putamen, pallidum); and (iii) automated selection of GM or FA values with the algorithm Relief-F. We assessed single- and multi-kernel approaches to classify combined GM and FA measures. Significant classifications were achieved between Early-HD and Pre-HD or HC individuals (accuracy: generally, 85% to 95%), and between Pre-HD and controls for the feature FA of the caudate ROI (74% accuracy). The combination of GM and FA measures did not result in higher performances. We demonstrate evidence on the high sensitivity of FA for the classification of the earliest Pre-HD stages, and successful distinction between HD stages. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-04-28 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10316/103347 http://hdl.handle.net/10316/103347 https://doi.org/10.3390/jpm12050704 |
url |
http://hdl.handle.net/10316/103347 https://doi.org/10.3390/jpm12050704 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
2075-4426 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
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1799134095162212352 |