Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)

Detalhes bibliográficos
Autor(a) principal: Aires, Tânia
Data de Publicação: 2015
Outros Autores: Moalic, Yann, Serrao, Ester A., ARNAUD-HAOND, Sophie
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/11447
Resumo: The siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we characterize the endophytic bacterial community of four Caulerpa taxa in the Mediterranean Sea, through 16S rRNA amplicon sequencing. Results reveal a striking alpha diversity of the bacterial communities, similar to levels found in sponges and coral holobionts. These comprise (1) a very small core community shared across all hosts (< 1% of the total community), (2) a variable portion (ca. 25%) shared by some Caulerpa taxa but not by all, which might represent environmentally acquired bacteria and (3) a large (> 70%) species-specific fraction of the community, forming very specific clusters revealed by modularity in networks of cooccurrence, even in areas where distinct Caulerpa taxa occurred in sympatry. Indirect inferences based on sequence homology suggest that these communities may play an important role in the metabolism of their host, in particular on their ability to grow on anoxic sediment. These findings support the hologenome theory and the need for a holistic framework in ecological and evolutionary studies of these holobionts that frequently become invasive.
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spelling Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)Taxifolia ChlorophytaMicrobial communitiesNitrogen-fixationMarine macroalgaeComplex networksCymodocea-NodosaGen. Nov.DiversityEvolutionSedimentThe siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we characterize the endophytic bacterial community of four Caulerpa taxa in the Mediterranean Sea, through 16S rRNA amplicon sequencing. Results reveal a striking alpha diversity of the bacterial communities, similar to levels found in sponges and coral holobionts. These comprise (1) a very small core community shared across all hosts (< 1% of the total community), (2) a variable portion (ca. 25%) shared by some Caulerpa taxa but not by all, which might represent environmentally acquired bacteria and (3) a large (> 70%) species-specific fraction of the community, forming very specific clusters revealed by modularity in networks of cooccurrence, even in areas where distinct Caulerpa taxa occurred in sympatry. Indirect inferences based on sequence homology suggest that these communities may play an important role in the metabolism of their host, in particular on their ability to grow on anoxic sediment. These findings support the hologenome theory and the need for a holistic framework in ecological and evolutionary studies of these holobionts that frequently become invasive.Portuguese Foundation for Science and Technology (FCT); FEDER; project IBISA [PTDC / MAR / 64749 / 2006]; PhD fellowship from FCT [SFRH/BD/30043/2006]; FSEOxford University PressSapientiaAires, TâniaMoalic, YannSerrao, Ester A.ARNAUD-HAOND, Sophie2018-12-07T14:53:18Z2015-072015-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/11447eng0168-649610.1093/femsec/fiv067info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:23:15Zoai:sapientia.ualg.pt:10400.1/11447Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:02:57.318487Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
title Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
spellingShingle Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
Aires, Tânia
Taxifolia Chlorophyta
Microbial communities
Nitrogen-fixation
Marine macroalgae
Complex networks
Cymodocea-Nodosa
Gen. Nov.
Diversity
Evolution
Sediment
title_short Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
title_full Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
title_fullStr Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
title_full_unstemmed Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
title_sort Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
author Aires, Tânia
author_facet Aires, Tânia
Moalic, Yann
Serrao, Ester A.
ARNAUD-HAOND, Sophie
author_role author
author2 Moalic, Yann
Serrao, Ester A.
ARNAUD-HAOND, Sophie
author2_role author
author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Aires, Tânia
Moalic, Yann
Serrao, Ester A.
ARNAUD-HAOND, Sophie
dc.subject.por.fl_str_mv Taxifolia Chlorophyta
Microbial communities
Nitrogen-fixation
Marine macroalgae
Complex networks
Cymodocea-Nodosa
Gen. Nov.
Diversity
Evolution
Sediment
topic Taxifolia Chlorophyta
Microbial communities
Nitrogen-fixation
Marine macroalgae
Complex networks
Cymodocea-Nodosa
Gen. Nov.
Diversity
Evolution
Sediment
description The siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we characterize the endophytic bacterial community of four Caulerpa taxa in the Mediterranean Sea, through 16S rRNA amplicon sequencing. Results reveal a striking alpha diversity of the bacterial communities, similar to levels found in sponges and coral holobionts. These comprise (1) a very small core community shared across all hosts (< 1% of the total community), (2) a variable portion (ca. 25%) shared by some Caulerpa taxa but not by all, which might represent environmentally acquired bacteria and (3) a large (> 70%) species-specific fraction of the community, forming very specific clusters revealed by modularity in networks of cooccurrence, even in areas where distinct Caulerpa taxa occurred in sympatry. Indirect inferences based on sequence homology suggest that these communities may play an important role in the metabolism of their host, in particular on their ability to grow on anoxic sediment. These findings support the hologenome theory and the need for a holistic framework in ecological and evolutionary studies of these holobionts that frequently become invasive.
publishDate 2015
dc.date.none.fl_str_mv 2015-07
2015-07-01T00:00:00Z
2018-12-07T14:53:18Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/11447
url http://hdl.handle.net/10400.1/11447
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0168-6496
10.1093/femsec/fiv067
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dc.publisher.none.fl_str_mv Oxford University Press
publisher.none.fl_str_mv Oxford University Press
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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