Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.1/11447 |
Resumo: | The siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we characterize the endophytic bacterial community of four Caulerpa taxa in the Mediterranean Sea, through 16S rRNA amplicon sequencing. Results reveal a striking alpha diversity of the bacterial communities, similar to levels found in sponges and coral holobionts. These comprise (1) a very small core community shared across all hosts (< 1% of the total community), (2) a variable portion (ca. 25%) shared by some Caulerpa taxa but not by all, which might represent environmentally acquired bacteria and (3) a large (> 70%) species-specific fraction of the community, forming very specific clusters revealed by modularity in networks of cooccurrence, even in areas where distinct Caulerpa taxa occurred in sympatry. Indirect inferences based on sequence homology suggest that these communities may play an important role in the metabolism of their host, in particular on their ability to grow on anoxic sediment. These findings support the hologenome theory and the need for a holistic framework in ecological and evolutionary studies of these holobionts that frequently become invasive. |
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Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa)Taxifolia ChlorophytaMicrobial communitiesNitrogen-fixationMarine macroalgaeComplex networksCymodocea-NodosaGen. Nov.DiversityEvolutionSedimentThe siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we characterize the endophytic bacterial community of four Caulerpa taxa in the Mediterranean Sea, through 16S rRNA amplicon sequencing. Results reveal a striking alpha diversity of the bacterial communities, similar to levels found in sponges and coral holobionts. These comprise (1) a very small core community shared across all hosts (< 1% of the total community), (2) a variable portion (ca. 25%) shared by some Caulerpa taxa but not by all, which might represent environmentally acquired bacteria and (3) a large (> 70%) species-specific fraction of the community, forming very specific clusters revealed by modularity in networks of cooccurrence, even in areas where distinct Caulerpa taxa occurred in sympatry. Indirect inferences based on sequence homology suggest that these communities may play an important role in the metabolism of their host, in particular on their ability to grow on anoxic sediment. These findings support the hologenome theory and the need for a holistic framework in ecological and evolutionary studies of these holobionts that frequently become invasive.Portuguese Foundation for Science and Technology (FCT); FEDER; project IBISA [PTDC / MAR / 64749 / 2006]; PhD fellowship from FCT [SFRH/BD/30043/2006]; FSEOxford University PressSapientiaAires, TâniaMoalic, YannSerrao, Ester A.ARNAUD-HAOND, Sophie2018-12-07T14:53:18Z2015-072015-07-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/11447eng0168-649610.1093/femsec/fiv067info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:23:15Zoai:sapientia.ualg.pt:10400.1/11447Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:02:57.318487Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
title |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
spellingShingle |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) Aires, Tânia Taxifolia Chlorophyta Microbial communities Nitrogen-fixation Marine macroalgae Complex networks Cymodocea-Nodosa Gen. Nov. Diversity Evolution Sediment |
title_short |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
title_full |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
title_fullStr |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
title_full_unstemmed |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
title_sort |
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa) |
author |
Aires, Tânia |
author_facet |
Aires, Tânia Moalic, Yann Serrao, Ester A. ARNAUD-HAOND, Sophie |
author_role |
author |
author2 |
Moalic, Yann Serrao, Ester A. ARNAUD-HAOND, Sophie |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Sapientia |
dc.contributor.author.fl_str_mv |
Aires, Tânia Moalic, Yann Serrao, Ester A. ARNAUD-HAOND, Sophie |
dc.subject.por.fl_str_mv |
Taxifolia Chlorophyta Microbial communities Nitrogen-fixation Marine macroalgae Complex networks Cymodocea-Nodosa Gen. Nov. Diversity Evolution Sediment |
topic |
Taxifolia Chlorophyta Microbial communities Nitrogen-fixation Marine macroalgae Complex networks Cymodocea-Nodosa Gen. Nov. Diversity Evolution Sediment |
description |
The siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we characterize the endophytic bacterial community of four Caulerpa taxa in the Mediterranean Sea, through 16S rRNA amplicon sequencing. Results reveal a striking alpha diversity of the bacterial communities, similar to levels found in sponges and coral holobionts. These comprise (1) a very small core community shared across all hosts (< 1% of the total community), (2) a variable portion (ca. 25%) shared by some Caulerpa taxa but not by all, which might represent environmentally acquired bacteria and (3) a large (> 70%) species-specific fraction of the community, forming very specific clusters revealed by modularity in networks of cooccurrence, even in areas where distinct Caulerpa taxa occurred in sympatry. Indirect inferences based on sequence homology suggest that these communities may play an important role in the metabolism of their host, in particular on their ability to grow on anoxic sediment. These findings support the hologenome theory and the need for a holistic framework in ecological and evolutionary studies of these holobionts that frequently become invasive. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015-07 2015-07-01T00:00:00Z 2018-12-07T14:53:18Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.1/11447 |
url |
http://hdl.handle.net/10400.1/11447 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
0168-6496 10.1093/femsec/fiv067 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Oxford University Press |
publisher.none.fl_str_mv |
Oxford University Press |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799133263514566656 |