Detection of enteric viruses and SARS-CoV-2 in beach sand

Detalhes bibliográficos
Autor(a) principal: Robalo, A.
Data de Publicação: 2023
Outros Autores: Brandão, João, Shibata, T., Solo-Gabriele, H., Santos, R., Monteiro, S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/8909
Resumo: Beach sand harbors a diverse group of microbial organisms that may be of public health concern. Nonetheless, little is known about the presence and distribution of viruses in beach sand. In this study, the first objective was to evaluate the presence of seven viruses (Aichi virus, enterovirus, hepatitis A virus, human adenovirus, norovirus, rotavirus, and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)) in sands collected at public beaches. The second objective was to assess the spatial distribution of enteric viruses in beach sand. To that end, 27 beach sand samples from different beaches in Portugal were collected between November 2018 and August 2020 and analyzed for the presence of viruses. At seven beaches, samples were collected in the supratidal and intertidal zones. Results show that viruses were detected in 89 % (24/27) of the sand samples. Aichi virus was the most prevalent (74 %). Noroviruses were present in 19 % of the samples (norovirus GI - 15 %, norovirus GII - 4 %). Human adenovirus and enterovirus were detected in 48 % and 22 % of the samples, respectively. Hepatitis A virus and rotavirus were not detected. Similarly, SARS-CoV-2 in beach sand collected during the initial stages of the pandemic was also not detected. The detection of three or more viruses occurred in 15 % of the samples. Concentrations of viruses were as high as 7.2 log copies (cp)/g of sand. Enteric viruses were found in higher prevalence in sand collected from the supratidal zone compared to the intertidal zone. Human adenovirus was detected in 43 % of the supratidal and 14 % in the intertidal samples and Aichi virus in 57 % and 86 % of the intertidal and supratidal areas, respectively. Our findings suggest that beach sand can be a reservoir of enteric viruses, suggesting that it might be a vehicle for disease transmission, particularly for children, the elderly, and immunocompromised users.
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spelling Detection of enteric viruses and SARS-CoV-2 in beach sandBeach SandEnteric VirusesIntertidal and Supertidal ZonesNorovirus GI and GIISARS-CoV-2Beach sand harbors a diverse group of microbial organisms that may be of public health concern. Nonetheless, little is known about the presence and distribution of viruses in beach sand. In this study, the first objective was to evaluate the presence of seven viruses (Aichi virus, enterovirus, hepatitis A virus, human adenovirus, norovirus, rotavirus, and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)) in sands collected at public beaches. The second objective was to assess the spatial distribution of enteric viruses in beach sand. To that end, 27 beach sand samples from different beaches in Portugal were collected between November 2018 and August 2020 and analyzed for the presence of viruses. At seven beaches, samples were collected in the supratidal and intertidal zones. Results show that viruses were detected in 89 % (24/27) of the sand samples. Aichi virus was the most prevalent (74 %). Noroviruses were present in 19 % of the samples (norovirus GI - 15 %, norovirus GII - 4 %). Human adenovirus and enterovirus were detected in 48 % and 22 % of the samples, respectively. Hepatitis A virus and rotavirus were not detected. Similarly, SARS-CoV-2 in beach sand collected during the initial stages of the pandemic was also not detected. The detection of three or more viruses occurred in 15 % of the samples. Concentrations of viruses were as high as 7.2 log copies (cp)/g of sand. Enteric viruses were found in higher prevalence in sand collected from the supratidal zone compared to the intertidal zone. Human adenovirus was detected in 43 % of the supratidal and 14 % in the intertidal samples and Aichi virus in 57 % and 86 % of the intertidal and supratidal areas, respectively. Our findings suggest that beach sand can be a reservoir of enteric viruses, suggesting that it might be a vehicle for disease transmission, particularly for children, the elderly, and immunocompromised users.This work was supported by the Joint Programming Initiative on Antimicrobial Resistance (JPIAMR) program, project Surveillance of Emerging Pathogens and Antibiotic Resistance in Aquatic Ecosystems (SARA), grant number Aquatic/0006/2020.ElsevierRepositório Científico do Instituto Nacional de SaúdeRobalo, A.Brandão, JoãoShibata, T.Solo-Gabriele, H.Santos, R.Monteiro, S.2024-01-16T15:41:51Z2023-11-252023-11-25T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/8909engSci Total Environ. 2023 Nov 25:901:165836. doi: 10.1016/j.scitotenv.2023.165836. Epub 2023 Jul 281879-102610.1016/j.scitotenv.2023.165836info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-01-20T01:32:33Zoai:repositorio.insa.pt:10400.18/8909Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T01:52:21.098877Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Detection of enteric viruses and SARS-CoV-2 in beach sand
title Detection of enteric viruses and SARS-CoV-2 in beach sand
spellingShingle Detection of enteric viruses and SARS-CoV-2 in beach sand
Robalo, A.
Beach Sand
Enteric Viruses
Intertidal and Supertidal Zones
Norovirus GI and GII
SARS-CoV-2
title_short Detection of enteric viruses and SARS-CoV-2 in beach sand
title_full Detection of enteric viruses and SARS-CoV-2 in beach sand
title_fullStr Detection of enteric viruses and SARS-CoV-2 in beach sand
title_full_unstemmed Detection of enteric viruses and SARS-CoV-2 in beach sand
title_sort Detection of enteric viruses and SARS-CoV-2 in beach sand
author Robalo, A.
author_facet Robalo, A.
Brandão, João
Shibata, T.
Solo-Gabriele, H.
Santos, R.
Monteiro, S.
author_role author
author2 Brandão, João
Shibata, T.
Solo-Gabriele, H.
Santos, R.
Monteiro, S.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Robalo, A.
Brandão, João
Shibata, T.
Solo-Gabriele, H.
Santos, R.
Monteiro, S.
dc.subject.por.fl_str_mv Beach Sand
Enteric Viruses
Intertidal and Supertidal Zones
Norovirus GI and GII
SARS-CoV-2
topic Beach Sand
Enteric Viruses
Intertidal and Supertidal Zones
Norovirus GI and GII
SARS-CoV-2
description Beach sand harbors a diverse group of microbial organisms that may be of public health concern. Nonetheless, little is known about the presence and distribution of viruses in beach sand. In this study, the first objective was to evaluate the presence of seven viruses (Aichi virus, enterovirus, hepatitis A virus, human adenovirus, norovirus, rotavirus, and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)) in sands collected at public beaches. The second objective was to assess the spatial distribution of enteric viruses in beach sand. To that end, 27 beach sand samples from different beaches in Portugal were collected between November 2018 and August 2020 and analyzed for the presence of viruses. At seven beaches, samples were collected in the supratidal and intertidal zones. Results show that viruses were detected in 89 % (24/27) of the sand samples. Aichi virus was the most prevalent (74 %). Noroviruses were present in 19 % of the samples (norovirus GI - 15 %, norovirus GII - 4 %). Human adenovirus and enterovirus were detected in 48 % and 22 % of the samples, respectively. Hepatitis A virus and rotavirus were not detected. Similarly, SARS-CoV-2 in beach sand collected during the initial stages of the pandemic was also not detected. The detection of three or more viruses occurred in 15 % of the samples. Concentrations of viruses were as high as 7.2 log copies (cp)/g of sand. Enteric viruses were found in higher prevalence in sand collected from the supratidal zone compared to the intertidal zone. Human adenovirus was detected in 43 % of the supratidal and 14 % in the intertidal samples and Aichi virus in 57 % and 86 % of the intertidal and supratidal areas, respectively. Our findings suggest that beach sand can be a reservoir of enteric viruses, suggesting that it might be a vehicle for disease transmission, particularly for children, the elderly, and immunocompromised users.
publishDate 2023
dc.date.none.fl_str_mv 2023-11-25
2023-11-25T00:00:00Z
2024-01-16T15:41:51Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/8909
url http://hdl.handle.net/10400.18/8909
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Sci Total Environ. 2023 Nov 25:901:165836. doi: 10.1016/j.scitotenv.2023.165836. Epub 2023 Jul 28
1879-1026
10.1016/j.scitotenv.2023.165836
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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