Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine

Detalhes bibliográficos
Autor(a) principal: Rocheta, Margarida
Data de Publicação: 2013
Outros Autores: Becker, Jörg D., Coito, João L., Carvalho, Luísa, Amâncio, Sara
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.7/715
Resumo: Grapevine is an extremely important crop worldwide.In southern Europe, post-flowering phases of the growth cycle can occur under high temperatures, excessive light, and drought conditions at soil and/or atmospheric level. In this study, we subjected greenhouse grown grapevine, variety Aragonez, to two individual abiotic stresses, water deficit stress(WDS), and heat stress (HS). The adaptation of plants to stress is a complex response triggered by cascades of molecular net works involved in stress perception, signal transduction, and the expression of specific stress-related genes and metabolites. Approaches such as array-based transcript profiling allow assessing the expression of thousands of genes in control and stress tissues. Using microarrays, we analyzed the leaf transcriptomic profile of the grapevine plants. Photosynthesis measurements verified that the plants were significantly affected by the stresses applied. Leaf gene expression was obtained using a high-throughput transcriptomic grapevine array, the 23K custom-made Affymetrix Vitis GeneChip. We identified 1,594 genes as differentially expressed between control and treatments and grouped them into ten major functional categories using MapMan software. The transcriptome of Aragonez was more significantly affected by HS when compared with WDS. The number of genes coding for heat-shock proteins and transcription factors expressed solely in response to HS suggesting their expression as unique signatures of HS. However, across-talk between the response pathways to both stresses was observed at the level of AP2/ERF transcription factors.
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spelling Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevineCluster AnalysisDehydrationHeat-Shock ProteinsOligonucleotide Array Sequence AnalysisPlant LeavesPlant ProteinsStress, PhysiologicalTranscription FactorsTranscriptomeVitisGene Expression Regulation, PlantGrapevine is an extremely important crop worldwide.In southern Europe, post-flowering phases of the growth cycle can occur under high temperatures, excessive light, and drought conditions at soil and/or atmospheric level. In this study, we subjected greenhouse grown grapevine, variety Aragonez, to two individual abiotic stresses, water deficit stress(WDS), and heat stress (HS). The adaptation of plants to stress is a complex response triggered by cascades of molecular net works involved in stress perception, signal transduction, and the expression of specific stress-related genes and metabolites. Approaches such as array-based transcript profiling allow assessing the expression of thousands of genes in control and stress tissues. Using microarrays, we analyzed the leaf transcriptomic profile of the grapevine plants. Photosynthesis measurements verified that the plants were significantly affected by the stresses applied. Leaf gene expression was obtained using a high-throughput transcriptomic grapevine array, the 23K custom-made Affymetrix Vitis GeneChip. We identified 1,594 genes as differentially expressed between control and treatments and grouped them into ten major functional categories using MapMan software. The transcriptome of Aragonez was more significantly affected by HS when compared with WDS. The number of genes coding for heat-shock proteins and transcription factors expressed solely in response to HS suggesting their expression as unique signatures of HS. However, across-talk between the response pathways to both stresses was observed at the level of AP2/ERF transcription factors.ERA-NET Plant Genomics 006/2006.Springer VerlagARCARocheta, MargaridaBecker, Jörg D.Coito, João L.Carvalho, LuísaAmâncio, Sara2016-11-16T18:24:44Z2013-10-122013-10-12T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfapplication/vnd.openxmlformats-officedocument.wordprocessingml.documentapplication/vnd.openxmlformats-officedocument.wordprocessingml.documentapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/pdfapplication/vnd.openxmlformats-officedocument.presentationml.presentationapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheethttp://hdl.handle.net/10400.7/715engRocheta, M., Becker, J.D., Coito, J.L. et al. Funct Integr Genomics (2014) 14: 135. doi:10.1007/s10142-013-0338-z10.1007/s10142-013-0338-zinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-11-29T14:35:06Zoai:arca.igc.gulbenkian.pt:10400.7/715Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:11:56.874421Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
title Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
spellingShingle Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
Rocheta, Margarida
Cluster Analysis
Dehydration
Heat-Shock Proteins
Oligonucleotide Array Sequence Analysis
Plant Leaves
Plant Proteins
Stress, Physiological
Transcription Factors
Transcriptome
Vitis
Gene Expression Regulation, Plant
title_short Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
title_full Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
title_fullStr Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
title_full_unstemmed Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
title_sort Heat and water stress induce unique transcriptional signatures of heat-shock proteins and transcription factors in grapevine
author Rocheta, Margarida
author_facet Rocheta, Margarida
Becker, Jörg D.
Coito, João L.
Carvalho, Luísa
Amâncio, Sara
author_role author
author2 Becker, Jörg D.
Coito, João L.
Carvalho, Luísa
Amâncio, Sara
author2_role author
author
author
author
dc.contributor.none.fl_str_mv ARCA
dc.contributor.author.fl_str_mv Rocheta, Margarida
Becker, Jörg D.
Coito, João L.
Carvalho, Luísa
Amâncio, Sara
dc.subject.por.fl_str_mv Cluster Analysis
Dehydration
Heat-Shock Proteins
Oligonucleotide Array Sequence Analysis
Plant Leaves
Plant Proteins
Stress, Physiological
Transcription Factors
Transcriptome
Vitis
Gene Expression Regulation, Plant
topic Cluster Analysis
Dehydration
Heat-Shock Proteins
Oligonucleotide Array Sequence Analysis
Plant Leaves
Plant Proteins
Stress, Physiological
Transcription Factors
Transcriptome
Vitis
Gene Expression Regulation, Plant
description Grapevine is an extremely important crop worldwide.In southern Europe, post-flowering phases of the growth cycle can occur under high temperatures, excessive light, and drought conditions at soil and/or atmospheric level. In this study, we subjected greenhouse grown grapevine, variety Aragonez, to two individual abiotic stresses, water deficit stress(WDS), and heat stress (HS). The adaptation of plants to stress is a complex response triggered by cascades of molecular net works involved in stress perception, signal transduction, and the expression of specific stress-related genes and metabolites. Approaches such as array-based transcript profiling allow assessing the expression of thousands of genes in control and stress tissues. Using microarrays, we analyzed the leaf transcriptomic profile of the grapevine plants. Photosynthesis measurements verified that the plants were significantly affected by the stresses applied. Leaf gene expression was obtained using a high-throughput transcriptomic grapevine array, the 23K custom-made Affymetrix Vitis GeneChip. We identified 1,594 genes as differentially expressed between control and treatments and grouped them into ten major functional categories using MapMan software. The transcriptome of Aragonez was more significantly affected by HS when compared with WDS. The number of genes coding for heat-shock proteins and transcription factors expressed solely in response to HS suggesting their expression as unique signatures of HS. However, across-talk between the response pathways to both stresses was observed at the level of AP2/ERF transcription factors.
publishDate 2013
dc.date.none.fl_str_mv 2013-10-12
2013-10-12T00:00:00Z
2016-11-16T18:24:44Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.7/715
url http://hdl.handle.net/10400.7/715
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Rocheta, M., Becker, J.D., Coito, J.L. et al. Funct Integr Genomics (2014) 14: 135. doi:10.1007/s10142-013-0338-z
10.1007/s10142-013-0338-z
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/vnd.openxmlformats-officedocument.wordprocessingml.document
application/vnd.openxmlformats-officedocument.wordprocessingml.document
application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
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application/vnd.openxmlformats-officedocument.presentationml.presentation
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dc.publisher.none.fl_str_mv Springer Verlag
publisher.none.fl_str_mv Springer Verlag
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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