A Machine Learning Approach to Sentinel-3 Feature Extraction In The Context Of Harmful Algal Blooms

• Autor(a) principal: Costa, João
• Data de Publicação: 2022
• Tipo de documento: Dissertação
• Idioma: eng
• Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
• Texto Completo: http://hdl.handle.net/10362/148374
• topic: machine learning; feature extraction; Sentinel-3; remote sensing; Domínio/Área Científica::Engenharia e Tecnologia::Engenharia Eletrotécnica, Eletrónica e Informática

Harmful Algal Blooms (HAB) are typically described as blooms of phytoplankton species that can not only cause harm to the environment but also humans. Some species that form these blooms can release biotoxins, which accumulate in shellfish [1]. When humans consume contaminated shellfish, it can cause adverse health problems [2]–[4]. Due to the associated risk of contamination, shellfisheries are forced to close, sometimes for months, leading to significant economic losses. Although microscopes enable toxic species identification, and bioassays enable biotoxin identification and quantification, these methods are impractical for continuous monitoring since they require recurrent in situ data sampling, followed by laboratory analysis. Chlorophyll a is a pigment common to almost all marine phytoplankton groups. It has a spectral signature that enables it to be detectable by remote satellites that capture water-leaving radiance [5]. Remote sensing can be very useful since it allows us to take synoptic measurements of large sea areas [6]. Several machine learning algorithms have been researched to detect or forecast algal biomass or HAB presence [7]–[10]. However, the application of remotely sensed images to detect and forecast biotoxin concentration seems relatively unexplored. Given this problem, two datasets with Sentinel-3 imagery patches were created, from along the west coastal region of Portugal, which differ in size and the preprocessing applied. We assessed the application of Machine Learning (ML) models to extract informative features from the datasets. The models were evaluated quantitatively and qualitatively. The qualitative analysis demonstrated how the features extracted by the models seem to be consistent with features extracted for downstream tasks in the literature, suggesting the features retain helpful information. However, at this time, further work Is required to determine whether the feature can be helpful in the task of biotoxin concentration forecasting.