Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation

Detalhes bibliográficos
Autor(a) principal: Leavitt, William D.
Data de Publicação: 2019
Outros Autores: Venceslau, Sofia S., Waldbauer, Jacob, Smith, Derek A., Cardoso Pereira, Inês A., Bradley, Alexander S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/95581
Resumo: Dissimilatory sulfate reduction is a microbial energy metabolism that can produce sulfur isotopic fractionations over a large range in magnitude. Calibrating sulfur isotopic fractionation in laboratory experiments allows for better interpretations of sulfur isotopes in modern sediments and ancient sedimentary rocks. The proteins involved in sulfate reduction are expressed in response to environmental conditions, and are collectively responsible for the net isotopic fractionation between sulfate and sulfide. We examined the role of DsrC, a key component of the sulfate reduction pathway, by comparing wildtype Desulfovibrio vulgaris DSM 644T to strain IPFG07, a mutant deficient in DsrC production. Both strains were cultivated in parallel chemostat reactors at identical turnover times and cell specific sulfate reduction rates. Under these conditions, sulfur isotopic fractionations between sulfate and sulfide of 17.3 ± 0.5 or 12.6 ± 0.5 were recorded for the wildtype or mutant, respectively. The enzymatic machinery that produced these different fractionations was revealed by quantitative proteomics. Results are consistent with a cellular-level response that throttled the supply of electrons and sulfur supply through the sulfate reduction pathway more in the mutant relative to the wildtype, independent of rate. We conclude that the smaller fractionation observed in the mutant strain is a consequence of sulfate reduction that proceeded at a rate that consumed a greater proportion of the strains overall capacity for sulfate reduction. These observations have consequences for models of sulfate reducer metabolism and how it yields different isotopic fractionations, notably, the role of DsrC in central energy metabolism.
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spelling Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC PerturbationChemostatMicrobial energy metabolismMicrobial sulfate reductionProteomicsSulfur isotope fractionationMicrobiologyMicrobiology (medical)Dissimilatory sulfate reduction is a microbial energy metabolism that can produce sulfur isotopic fractionations over a large range in magnitude. Calibrating sulfur isotopic fractionation in laboratory experiments allows for better interpretations of sulfur isotopes in modern sediments and ancient sedimentary rocks. The proteins involved in sulfate reduction are expressed in response to environmental conditions, and are collectively responsible for the net isotopic fractionation between sulfate and sulfide. We examined the role of DsrC, a key component of the sulfate reduction pathway, by comparing wildtype Desulfovibrio vulgaris DSM 644T to strain IPFG07, a mutant deficient in DsrC production. Both strains were cultivated in parallel chemostat reactors at identical turnover times and cell specific sulfate reduction rates. Under these conditions, sulfur isotopic fractionations between sulfate and sulfide of 17.3 ± 0.5 or 12.6 ± 0.5 were recorded for the wildtype or mutant, respectively. The enzymatic machinery that produced these different fractionations was revealed by quantitative proteomics. Results are consistent with a cellular-level response that throttled the supply of electrons and sulfur supply through the sulfate reduction pathway more in the mutant relative to the wildtype, independent of rate. We conclude that the smaller fractionation observed in the mutant strain is a consequence of sulfate reduction that proceeded at a rate that consumed a greater proportion of the strains overall capacity for sulfate reduction. These observations have consequences for models of sulfate reducer metabolism and how it yields different isotopic fractionations, notably, the role of DsrC in central energy metabolism.Instituto de Tecnologia Química e Biológica António Xavier (ITQB)RUNLeavitt, William D.Venceslau, Sofia S.Waldbauer, JacobSmith, Derek A.Cardoso Pereira, Inês A.Bradley, Alexander S.2020-04-02T22:52:55Z2019-01-012019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10362/95581eng1664-302XPURE: 16562819https://doi.org/10.3389/fmicb.2019.00658info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:43:37Zoai:run.unl.pt:10362/95581Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:38:23.559573Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
title Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
spellingShingle Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
Leavitt, William D.
Chemostat
Microbial energy metabolism
Microbial sulfate reduction
Proteomics
Sulfur isotope fractionation
Microbiology
Microbiology (medical)
title_short Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
title_full Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
title_fullStr Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
title_full_unstemmed Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
title_sort Proteomic and Isotopic Response of Desulfovibrio vulgaris to DsrC Perturbation
author Leavitt, William D.
author_facet Leavitt, William D.
Venceslau, Sofia S.
Waldbauer, Jacob
Smith, Derek A.
Cardoso Pereira, Inês A.
Bradley, Alexander S.
author_role author
author2 Venceslau, Sofia S.
Waldbauer, Jacob
Smith, Derek A.
Cardoso Pereira, Inês A.
Bradley, Alexander S.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Instituto de Tecnologia Química e Biológica António Xavier (ITQB)
RUN
dc.contributor.author.fl_str_mv Leavitt, William D.
Venceslau, Sofia S.
Waldbauer, Jacob
Smith, Derek A.
Cardoso Pereira, Inês A.
Bradley, Alexander S.
dc.subject.por.fl_str_mv Chemostat
Microbial energy metabolism
Microbial sulfate reduction
Proteomics
Sulfur isotope fractionation
Microbiology
Microbiology (medical)
topic Chemostat
Microbial energy metabolism
Microbial sulfate reduction
Proteomics
Sulfur isotope fractionation
Microbiology
Microbiology (medical)
description Dissimilatory sulfate reduction is a microbial energy metabolism that can produce sulfur isotopic fractionations over a large range in magnitude. Calibrating sulfur isotopic fractionation in laboratory experiments allows for better interpretations of sulfur isotopes in modern sediments and ancient sedimentary rocks. The proteins involved in sulfate reduction are expressed in response to environmental conditions, and are collectively responsible for the net isotopic fractionation between sulfate and sulfide. We examined the role of DsrC, a key component of the sulfate reduction pathway, by comparing wildtype Desulfovibrio vulgaris DSM 644T to strain IPFG07, a mutant deficient in DsrC production. Both strains were cultivated in parallel chemostat reactors at identical turnover times and cell specific sulfate reduction rates. Under these conditions, sulfur isotopic fractionations between sulfate and sulfide of 17.3 ± 0.5 or 12.6 ± 0.5 were recorded for the wildtype or mutant, respectively. The enzymatic machinery that produced these different fractionations was revealed by quantitative proteomics. Results are consistent with a cellular-level response that throttled the supply of electrons and sulfur supply through the sulfate reduction pathway more in the mutant relative to the wildtype, independent of rate. We conclude that the smaller fractionation observed in the mutant strain is a consequence of sulfate reduction that proceeded at a rate that consumed a greater proportion of the strains overall capacity for sulfate reduction. These observations have consequences for models of sulfate reducer metabolism and how it yields different isotopic fractionations, notably, the role of DsrC in central energy metabolism.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
2019-01-01T00:00:00Z
2020-04-02T22:52:55Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/95581
url http://hdl.handle.net/10362/95581
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1664-302X
PURE: 16562819
https://doi.org/10.3389/fmicb.2019.00658
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dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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