The role of post-translational modifications on NKX6-2 behavior and function
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Tipo de documento: | Dissertação |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10362/164847 |
Resumo: | NK6 Homeobox 2 (NKX6-2) is a member of the NKX family of transcriptional regulators, responsible for governing oligodendrocyte maturation and the fate of motor neurons and pancreatic cells. Loss-of-function mutations in the NKX6-2 gene result in a rare autosomal recessive genetic disorder known as Spastic Ataxia (SPAX8) with hypomyelinating leukodystrophy. This disease is characterized by cerebellar dysfunction, loss of white matter and, in some cases, atrophy of the vermis and cerebellar hemispheres. Some of the mutations on NKX6-2 affect a putative transactivation domain (TAD), located at the C-terminus of the protein and which function is unclear. Consultation of public databases indicate that TAD contains three residues that have been found phosphorylated in high-throughput mass spectrometry analyses: S246, T252 and Y238. However, the function of these phosphorylation events remains completely unknown. This study attempted to address a fundamental question related to the role of post-translational modifi cations on the intracellular location of NKX6-2. We have developed mammalian expression constructs encoding NKX6-2 fused to the Venus fluorescent reporter, where the transcription factor carries point mutations that inhibit and mimic phosphorylation at S246, T252, and Y238. Specifi cally, mutating S246 and T252 to alanine, and Y238 to phenylalanine, would prevent their phosphorylation while keeping similar structure. On the other hand, mutating S246 and T252 to aspartic acid added an extra negative charge at these sites, partially mimicking phosphorylation. The tyrosine residue was not mutated to mimic phosphorylation, because there are no natural amino acids with an extra negative charge that share the phenolic ring of tyrosine. No mutation produced alterations in the nuclear localization of NKX6-2 in living cells. However, mutations in this protein were associated with nuclear morphology abnormalities, as well as increased protein stability. Additionally, we identified endogenous expression of NKX6-2 in human cancer cell lines where we could study NKX6-2 in normal and pathological, SPAX8- related conditions. These results offer crucial insights into molecular and cellular aspects of NKX6-2 biology, with potential implications for SPAX8. |
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The role of post-translational modifications on NKX6-2 behavior and functionNKX6-2Transcription factorSpastic ataxia 8PhosphorylationTransactivation domainDomínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e TecnologiasNK6 Homeobox 2 (NKX6-2) is a member of the NKX family of transcriptional regulators, responsible for governing oligodendrocyte maturation and the fate of motor neurons and pancreatic cells. Loss-of-function mutations in the NKX6-2 gene result in a rare autosomal recessive genetic disorder known as Spastic Ataxia (SPAX8) with hypomyelinating leukodystrophy. This disease is characterized by cerebellar dysfunction, loss of white matter and, in some cases, atrophy of the vermis and cerebellar hemispheres. Some of the mutations on NKX6-2 affect a putative transactivation domain (TAD), located at the C-terminus of the protein and which function is unclear. Consultation of public databases indicate that TAD contains three residues that have been found phosphorylated in high-throughput mass spectrometry analyses: S246, T252 and Y238. However, the function of these phosphorylation events remains completely unknown. This study attempted to address a fundamental question related to the role of post-translational modifi cations on the intracellular location of NKX6-2. We have developed mammalian expression constructs encoding NKX6-2 fused to the Venus fluorescent reporter, where the transcription factor carries point mutations that inhibit and mimic phosphorylation at S246, T252, and Y238. Specifi cally, mutating S246 and T252 to alanine, and Y238 to phenylalanine, would prevent their phosphorylation while keeping similar structure. On the other hand, mutating S246 and T252 to aspartic acid added an extra negative charge at these sites, partially mimicking phosphorylation. The tyrosine residue was not mutated to mimic phosphorylation, because there are no natural amino acids with an extra negative charge that share the phenolic ring of tyrosine. No mutation produced alterations in the nuclear localization of NKX6-2 in living cells. However, mutations in this protein were associated with nuclear morphology abnormalities, as well as increased protein stability. Additionally, we identified endogenous expression of NKX6-2 in human cancer cell lines where we could study NKX6-2 in normal and pathological, SPAX8- related conditions. These results offer crucial insights into molecular and cellular aspects of NKX6-2 biology, with potential implications for SPAX8.NK6 Homeobox 2 (NKX6-2) é um membro da família NKX de reguladores transcricionais, responsável por controlar a maturação de oligodendrócitos e o destino de neurónios motores e células pancreáticas. Mutações de perda de função no gene NKX6-2 resultam numa rara doença genética autossómica recessiva conhecida como Ataxia Espástica 8, em inglês: Spastic Ataxia 8 (SPAX8) com leucodistrofi a hipomielinizante. Esta doença é caracterizada por disfunção cerebelar, perda de substância branca e, em alguns casos, atrofia do vermis e dos hemisférios cerebelares. Algumas das mutações em NKX6-2 afetam um domínio de transativação putativo (TAD), localizado no C-terminus da proteína, cuja função é incerta. Consultas em bases de dados públicas indicam que o TAD contém três resíduos que foram encontrados fosforilados em análises de espectrometria de massa de alta resolução: S246, T252 e Y238. No entanto, a função desses eventos de fosforilação permanece completamente desconhecida. Este estudo procurou abordar uma questão fundamental relacionada com o papel das modificações pós-traducionais na localização intracelular do NKX6-2. Desenvolvemos construções de expressão em mamíferos codificando o NKX6-2 fundido com o marcador fluorescente Venus, em que o fator de transcrição transporta mutações pontuais que inibem e imitam a fosforilação em S246, T252 e Y238. Especificamente, a mutação de S246 e T252 para alanina e Y238 para fenilalanina impediria a sua fosforilação, mantendo uma estrutura semelhante. Por outro lado, a mutação de S246 e T252 para ácido aspártico adicionou uma carga negativa extra nesses locais, imitando parcialmente a fosforilação. O resíduo de tirosina não foi mutado para imitar a fosforilação, porque não existem aminoácidos naturais com uma carga negativa extra que partilhem o anel fenólico da tirosina. Nenhuma mutação produziu alterações na localização nuclear do NKX6-2 em células vivas. No entanto, mutações nesta proteína foram associadas a anomalias na morfologia nuclear, bem como a um aumento na estabilidade da proteína. Além disso,identificámos a expressão endógena do NKX6-2 em linhas celulares de cancro humano, onde pudemos estudar o NKX6-2 em condições normais e patológicas relacionadas com o SPAX8. Estes resultados oferecem informações cruciais sobre aspetos moleculares e celulares da biologia do NKX6-2, com possíveis implicações para o SPAX8.Herrera, FedericoCaldas, MargaridaRUNFrança, Brenda Gabriella2024-03-13T10:58:31Z2023-112023-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/164847enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-18T01:46:32Zoai:run.unl.pt:10362/164847Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T04:02:02.312414Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
The role of post-translational modifications on NKX6-2 behavior and function |
title |
The role of post-translational modifications on NKX6-2 behavior and function |
spellingShingle |
The role of post-translational modifications on NKX6-2 behavior and function França, Brenda Gabriella NKX6-2 Transcription factor Spastic ataxia 8 Phosphorylation Transactivation domain Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
title_short |
The role of post-translational modifications on NKX6-2 behavior and function |
title_full |
The role of post-translational modifications on NKX6-2 behavior and function |
title_fullStr |
The role of post-translational modifications on NKX6-2 behavior and function |
title_full_unstemmed |
The role of post-translational modifications on NKX6-2 behavior and function |
title_sort |
The role of post-translational modifications on NKX6-2 behavior and function |
author |
França, Brenda Gabriella |
author_facet |
França, Brenda Gabriella |
author_role |
author |
dc.contributor.none.fl_str_mv |
Herrera, Federico Caldas, Margarida RUN |
dc.contributor.author.fl_str_mv |
França, Brenda Gabriella |
dc.subject.por.fl_str_mv |
NKX6-2 Transcription factor Spastic ataxia 8 Phosphorylation Transactivation domain Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
topic |
NKX6-2 Transcription factor Spastic ataxia 8 Phosphorylation Transactivation domain Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
description |
NK6 Homeobox 2 (NKX6-2) is a member of the NKX family of transcriptional regulators, responsible for governing oligodendrocyte maturation and the fate of motor neurons and pancreatic cells. Loss-of-function mutations in the NKX6-2 gene result in a rare autosomal recessive genetic disorder known as Spastic Ataxia (SPAX8) with hypomyelinating leukodystrophy. This disease is characterized by cerebellar dysfunction, loss of white matter and, in some cases, atrophy of the vermis and cerebellar hemispheres. Some of the mutations on NKX6-2 affect a putative transactivation domain (TAD), located at the C-terminus of the protein and which function is unclear. Consultation of public databases indicate that TAD contains three residues that have been found phosphorylated in high-throughput mass spectrometry analyses: S246, T252 and Y238. However, the function of these phosphorylation events remains completely unknown. This study attempted to address a fundamental question related to the role of post-translational modifi cations on the intracellular location of NKX6-2. We have developed mammalian expression constructs encoding NKX6-2 fused to the Venus fluorescent reporter, where the transcription factor carries point mutations that inhibit and mimic phosphorylation at S246, T252, and Y238. Specifi cally, mutating S246 and T252 to alanine, and Y238 to phenylalanine, would prevent their phosphorylation while keeping similar structure. On the other hand, mutating S246 and T252 to aspartic acid added an extra negative charge at these sites, partially mimicking phosphorylation. The tyrosine residue was not mutated to mimic phosphorylation, because there are no natural amino acids with an extra negative charge that share the phenolic ring of tyrosine. No mutation produced alterations in the nuclear localization of NKX6-2 in living cells. However, mutations in this protein were associated with nuclear morphology abnormalities, as well as increased protein stability. Additionally, we identified endogenous expression of NKX6-2 in human cancer cell lines where we could study NKX6-2 in normal and pathological, SPAX8- related conditions. These results offer crucial insights into molecular and cellular aspects of NKX6-2 biology, with potential implications for SPAX8. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-11 2023-11-01T00:00:00Z 2024-03-13T10:58:31Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
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http://hdl.handle.net/10362/164847 |
url |
http://hdl.handle.net/10362/164847 |
dc.language.iso.fl_str_mv |
eng |
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eng |
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info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
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