DNA barcoding for species assignment: the case of Mediterranean marine fishes

Detalhes bibliográficos
Autor(a) principal: Landi, Mónica
Data de Publicação: 2014
Outros Autores: Dimech, Mark, Arculeo, Marco, Biondo, Girolama, Martins, Rogelia, Carneiro, Miguel, Carvalho, Gary Robert, Lo Brutto, Sabrina, Costa, Filipe O.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/63302
Resumo: DNA barcoding enhances the prospects for species-level identifications globally using a standardized and authenticated DNA-based approach. Reference libraries comprising validated DNA barcodes (COI) constitute robust datasets for testing query sequences, providing considerable utility to identify marine fish and other organisms. Here we test the feasibility of using DNA barcoding to assign species to tissue samples from fish collected in the central Mediterranean Sea, a major contributor to the European marine ichthyofaunal diversity.
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spelling DNA barcoding for species assignment: the case of Mediterranean marine fishesAnimalsClassificationDNA Barcoding, TaxonomicFishesMediterranean SeaPhylogenySpecies SpecificityScience & TechnologyDNA barcoding enhances the prospects for species-level identifications globally using a standardized and authenticated DNA-based approach. Reference libraries comprising validated DNA barcodes (COI) constitute robust datasets for testing query sequences, providing considerable utility to identify marine fish and other organisms. Here we test the feasibility of using DNA barcoding to assign species to tissue samples from fish collected in the central Mediterranean Sea, a major contributor to the European marine ichthyofaunal diversity.Research carried out at University of Palermo was supported by "Fondi di Ateneo ex 60% Universita di Palermo". This work was supported by FEDER through POFCCOMPETE and by national funds from "Fundacaopara a Ciencia e a Tecnologia (FCT)" in the scope of the grants, FCOMP-01-0124-FEDER-010596 and PEst-OE/BIA/UI4050/2014. ML's work was supported by the fellowship Ref: SFRH/BPD/45246/2008 from Fundacaopara a Ciencia e a Tecnologia. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.Public Library of Science (PLOS)Universidade do MinhoLandi, MónicaDimech, MarkArculeo, MarcoBiondo, GirolamaMartins, RogeliaCarneiro, MiguelCarvalho, Gary RobertLo Brutto, SabrinaCosta, Filipe O.20142014-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/63302engLandi M, Dimech M, Arculeo M, Biondo G, Martins R, Carneiro M, et al. (2014) DNA Barcoding for Species Assignment: The Case of Mediterranean Marine Fishes. PLoS ONE 9(9): e106135. https://doi.org/10.1371/journal.pone.01061351932-62031932-620310.1371/journal.pone.010613525222272https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0106135info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:05:21Zoai:repositorium.sdum.uminho.pt:1822/63302Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:55:45.052965Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv DNA barcoding for species assignment: the case of Mediterranean marine fishes
title DNA barcoding for species assignment: the case of Mediterranean marine fishes
spellingShingle DNA barcoding for species assignment: the case of Mediterranean marine fishes
Landi, Mónica
Animals
Classification
DNA Barcoding, Taxonomic
Fishes
Mediterranean Sea
Phylogeny
Species Specificity
Science & Technology
title_short DNA barcoding for species assignment: the case of Mediterranean marine fishes
title_full DNA barcoding for species assignment: the case of Mediterranean marine fishes
title_fullStr DNA barcoding for species assignment: the case of Mediterranean marine fishes
title_full_unstemmed DNA barcoding for species assignment: the case of Mediterranean marine fishes
title_sort DNA barcoding for species assignment: the case of Mediterranean marine fishes
author Landi, Mónica
author_facet Landi, Mónica
Dimech, Mark
Arculeo, Marco
Biondo, Girolama
Martins, Rogelia
Carneiro, Miguel
Carvalho, Gary Robert
Lo Brutto, Sabrina
Costa, Filipe O.
author_role author
author2 Dimech, Mark
Arculeo, Marco
Biondo, Girolama
Martins, Rogelia
Carneiro, Miguel
Carvalho, Gary Robert
Lo Brutto, Sabrina
Costa, Filipe O.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Landi, Mónica
Dimech, Mark
Arculeo, Marco
Biondo, Girolama
Martins, Rogelia
Carneiro, Miguel
Carvalho, Gary Robert
Lo Brutto, Sabrina
Costa, Filipe O.
dc.subject.por.fl_str_mv Animals
Classification
DNA Barcoding, Taxonomic
Fishes
Mediterranean Sea
Phylogeny
Species Specificity
Science & Technology
topic Animals
Classification
DNA Barcoding, Taxonomic
Fishes
Mediterranean Sea
Phylogeny
Species Specificity
Science & Technology
description DNA barcoding enhances the prospects for species-level identifications globally using a standardized and authenticated DNA-based approach. Reference libraries comprising validated DNA barcodes (COI) constitute robust datasets for testing query sequences, providing considerable utility to identify marine fish and other organisms. Here we test the feasibility of using DNA barcoding to assign species to tissue samples from fish collected in the central Mediterranean Sea, a major contributor to the European marine ichthyofaunal diversity.
publishDate 2014
dc.date.none.fl_str_mv 2014
2014-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/63302
url http://hdl.handle.net/1822/63302
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Landi M, Dimech M, Arculeo M, Biondo G, Martins R, Carneiro M, et al. (2014) DNA Barcoding for Species Assignment: The Case of Mediterranean Marine Fishes. PLoS ONE 9(9): e106135. https://doi.org/10.1371/journal.pone.0106135
1932-6203
1932-6203
10.1371/journal.pone.0106135
25222272
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0106135
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Public Library of Science (PLOS)
publisher.none.fl_str_mv Public Library of Science (PLOS)
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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