Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10400.18/2919 |
Resumo: | Infections by Campylobacter jejuni and Campylobacter coli are considered the major cause of bacterial gastroenteritis in humans, with food being the main source of infection. In this study, a total of 196 Campylobacter strains (125 isolates from humans, 39 from retail food and 32 from food animal sources) isolated in Portugal between 2009 and 2012 were characterised by multilocus sequence typing (MLST) and flaA short variable region (SVR) typing. Susceptibility to six antibiotics as well as the mechanisms underlying antibiotic resistance phenotypes was also studied. Based on MLST typing, C. coli strains were genetically more conserved, with a predominant clonal complex (CC828), than C. jejuni strains. In contrast, C. coli isolates were genetically more variable than C. jejuni with regard to flaA-SVR typing. A high rate of resistance was observed for quinolones (100% to nalidixic acid, >90% to ciprofloxacin) and, in general, resistance was more common among C. coli, especially for erythromycin (40.2% vs. 6.7%). In addition, most isolates (86%) were resistant to multiple antimicrobial families. Besides the expected point mutations associated with antibiotic resistance, detected polymorphisms in the cmeABC locus likely play a role in the multiresistant phenotype. This study provides for the first time an overview of the genetic diversity of Campylobacter strains from Portugal. It also shows a worrying antibiotic multiresistance rate and the emergence of Campylobacter strains resistant to antibiotics of human use. |
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Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance ratesCampylobacterGenetic DiversityAntibiotic SusceptibilityInfecções GastrointestinaisPortugalInfections by Campylobacter jejuni and Campylobacter coli are considered the major cause of bacterial gastroenteritis in humans, with food being the main source of infection. In this study, a total of 196 Campylobacter strains (125 isolates from humans, 39 from retail food and 32 from food animal sources) isolated in Portugal between 2009 and 2012 were characterised by multilocus sequence typing (MLST) and flaA short variable region (SVR) typing. Susceptibility to six antibiotics as well as the mechanisms underlying antibiotic resistance phenotypes was also studied. Based on MLST typing, C. coli strains were genetically more conserved, with a predominant clonal complex (CC828), than C. jejuni strains. In contrast, C. coli isolates were genetically more variable than C. jejuni with regard to flaA-SVR typing. A high rate of resistance was observed for quinolones (100% to nalidixic acid, >90% to ciprofloxacin) and, in general, resistance was more common among C. coli, especially for erythromycin (40.2% vs. 6.7%). In addition, most isolates (86%) were resistant to multiple antimicrobial families. Besides the expected point mutations associated with antibiotic resistance, detected polymorphisms in the cmeABC locus likely play a role in the multiresistant phenotype. This study provides for the first time an overview of the genetic diversity of Campylobacter strains from Portugal. It also shows a worrying antibiotic multiresistance rate and the emergence of Campylobacter strains resistant to antibiotics of human use.This work was supported by FEDER funds through Programa Operacional Factores de Competitividade – COMPETE and byNational Funds through FCT (Fundação para a Ciência e Tecnologia)[project PTDC/AGR-ALI/121876/2010].Elsevier/ International Society of ChemotherapyRepositório Científico do Instituto Nacional de SaúdeDuarte, A.Santos, A.Manageiro, V.Martins, A.Fraqueza, M.J.Caniça, ManuelaDomingues, F.Oleastro, M.2015-02-19T13:21:48Z2014-102014-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/2919engInt J Antimicrob Agents. 2014 Oct;44(4):306-13. doi: 10.1016/j.ijantimicag.2014.06.012. Epub 2014 Jul 260924-857910.1016/j.ijantimicag.2014.06.012info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:39:21Zoai:repositorio.insa.pt:10400.18/2919Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:37:33.291175Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
title |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
spellingShingle |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates Duarte, A. Campylobacter Genetic Diversity Antibiotic Susceptibility Infecções Gastrointestinais Portugal |
title_short |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
title_full |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
title_fullStr |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
title_full_unstemmed |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
title_sort |
Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates |
author |
Duarte, A. |
author_facet |
Duarte, A. Santos, A. Manageiro, V. Martins, A. Fraqueza, M.J. Caniça, Manuela Domingues, F. Oleastro, M. |
author_role |
author |
author2 |
Santos, A. Manageiro, V. Martins, A. Fraqueza, M.J. Caniça, Manuela Domingues, F. Oleastro, M. |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Repositório Científico do Instituto Nacional de Saúde |
dc.contributor.author.fl_str_mv |
Duarte, A. Santos, A. Manageiro, V. Martins, A. Fraqueza, M.J. Caniça, Manuela Domingues, F. Oleastro, M. |
dc.subject.por.fl_str_mv |
Campylobacter Genetic Diversity Antibiotic Susceptibility Infecções Gastrointestinais Portugal |
topic |
Campylobacter Genetic Diversity Antibiotic Susceptibility Infecções Gastrointestinais Portugal |
description |
Infections by Campylobacter jejuni and Campylobacter coli are considered the major cause of bacterial gastroenteritis in humans, with food being the main source of infection. In this study, a total of 196 Campylobacter strains (125 isolates from humans, 39 from retail food and 32 from food animal sources) isolated in Portugal between 2009 and 2012 were characterised by multilocus sequence typing (MLST) and flaA short variable region (SVR) typing. Susceptibility to six antibiotics as well as the mechanisms underlying antibiotic resistance phenotypes was also studied. Based on MLST typing, C. coli strains were genetically more conserved, with a predominant clonal complex (CC828), than C. jejuni strains. In contrast, C. coli isolates were genetically more variable than C. jejuni with regard to flaA-SVR typing. A high rate of resistance was observed for quinolones (100% to nalidixic acid, >90% to ciprofloxacin) and, in general, resistance was more common among C. coli, especially for erythromycin (40.2% vs. 6.7%). In addition, most isolates (86%) were resistant to multiple antimicrobial families. Besides the expected point mutations associated with antibiotic resistance, detected polymorphisms in the cmeABC locus likely play a role in the multiresistant phenotype. This study provides for the first time an overview of the genetic diversity of Campylobacter strains from Portugal. It also shows a worrying antibiotic multiresistance rate and the emergence of Campylobacter strains resistant to antibiotics of human use. |
publishDate |
2014 |
dc.date.none.fl_str_mv |
2014-10 2014-10-01T00:00:00Z 2015-02-19T13:21:48Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10400.18/2919 |
url |
http://hdl.handle.net/10400.18/2919 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Int J Antimicrob Agents. 2014 Oct;44(4):306-13. doi: 10.1016/j.ijantimicag.2014.06.012. Epub 2014 Jul 26 0924-8579 10.1016/j.ijantimicag.2014.06.012 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/embargoedAccess |
eu_rights_str_mv |
embargoedAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier/ International Society of Chemotherapy |
publisher.none.fl_str_mv |
Elsevier/ International Society of Chemotherapy |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
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Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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1799132109990789120 |