Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates

Detalhes bibliográficos
Autor(a) principal: Duarte, A.
Data de Publicação: 2014
Outros Autores: Santos, A., Manageiro, V., Martins, A., Fraqueza, M.J., Caniça, Manuela, Domingues, F., Oleastro, M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/2919
Resumo: Infections by Campylobacter jejuni and Campylobacter coli are considered the major cause of bacterial gastroenteritis in humans, with food being the main source of infection. In this study, a total of 196 Campylobacter strains (125 isolates from humans, 39 from retail food and 32 from food animal sources) isolated in Portugal between 2009 and 2012 were characterised by multilocus sequence typing (MLST) and flaA short variable region (SVR) typing. Susceptibility to six antibiotics as well as the mechanisms underlying antibiotic resistance phenotypes was also studied. Based on MLST typing, C. coli strains were genetically more conserved, with a predominant clonal complex (CC828), than C. jejuni strains. In contrast, C. coli isolates were genetically more variable than C. jejuni with regard to flaA-SVR typing. A high rate of resistance was observed for quinolones (100% to nalidixic acid, >90% to ciprofloxacin) and, in general, resistance was more common among C. coli, especially for erythromycin (40.2% vs. 6.7%). In addition, most isolates (86%) were resistant to multiple antimicrobial families. Besides the expected point mutations associated with antibiotic resistance, detected polymorphisms in the cmeABC locus likely play a role in the multiresistant phenotype. This study provides for the first time an overview of the genetic diversity of Campylobacter strains from Portugal. It also shows a worrying antibiotic multiresistance rate and the emergence of Campylobacter strains resistant to antibiotics of human use.
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spelling Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance ratesCampylobacterGenetic DiversityAntibiotic SusceptibilityInfecções GastrointestinaisPortugalInfections by Campylobacter jejuni and Campylobacter coli are considered the major cause of bacterial gastroenteritis in humans, with food being the main source of infection. In this study, a total of 196 Campylobacter strains (125 isolates from humans, 39 from retail food and 32 from food animal sources) isolated in Portugal between 2009 and 2012 were characterised by multilocus sequence typing (MLST) and flaA short variable region (SVR) typing. Susceptibility to six antibiotics as well as the mechanisms underlying antibiotic resistance phenotypes was also studied. Based on MLST typing, C. coli strains were genetically more conserved, with a predominant clonal complex (CC828), than C. jejuni strains. In contrast, C. coli isolates were genetically more variable than C. jejuni with regard to flaA-SVR typing. A high rate of resistance was observed for quinolones (100% to nalidixic acid, >90% to ciprofloxacin) and, in general, resistance was more common among C. coli, especially for erythromycin (40.2% vs. 6.7%). In addition, most isolates (86%) were resistant to multiple antimicrobial families. Besides the expected point mutations associated with antibiotic resistance, detected polymorphisms in the cmeABC locus likely play a role in the multiresistant phenotype. This study provides for the first time an overview of the genetic diversity of Campylobacter strains from Portugal. It also shows a worrying antibiotic multiresistance rate and the emergence of Campylobacter strains resistant to antibiotics of human use.This work was supported by FEDER funds through Programa Operacional Factores de Competitividade – COMPETE and byNational Funds through FCT (Fundação para a Ciência e Tecnologia)[project PTDC/AGR-ALI/121876/2010].Elsevier/ International Society of ChemotherapyRepositório Científico do Instituto Nacional de SaúdeDuarte, A.Santos, A.Manageiro, V.Martins, A.Fraqueza, M.J.Caniça, ManuelaDomingues, F.Oleastro, M.2015-02-19T13:21:48Z2014-102014-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/2919engInt J Antimicrob Agents. 2014 Oct;44(4):306-13. doi: 10.1016/j.ijantimicag.2014.06.012. Epub 2014 Jul 260924-857910.1016/j.ijantimicag.2014.06.012info:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:39:21Zoai:repositorio.insa.pt:10400.18/2919Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:37:33.291175Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
title Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
spellingShingle Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
Duarte, A.
Campylobacter
Genetic Diversity
Antibiotic Susceptibility
Infecções Gastrointestinais
Portugal
title_short Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
title_full Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
title_fullStr Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
title_full_unstemmed Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
title_sort Human, food and animal Campylobacter spp. isolated in Portugal: high genetic diversity and antibiotic resistance rates
author Duarte, A.
author_facet Duarte, A.
Santos, A.
Manageiro, V.
Martins, A.
Fraqueza, M.J.
Caniça, Manuela
Domingues, F.
Oleastro, M.
author_role author
author2 Santos, A.
Manageiro, V.
Martins, A.
Fraqueza, M.J.
Caniça, Manuela
Domingues, F.
Oleastro, M.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Duarte, A.
Santos, A.
Manageiro, V.
Martins, A.
Fraqueza, M.J.
Caniça, Manuela
Domingues, F.
Oleastro, M.
dc.subject.por.fl_str_mv Campylobacter
Genetic Diversity
Antibiotic Susceptibility
Infecções Gastrointestinais
Portugal
topic Campylobacter
Genetic Diversity
Antibiotic Susceptibility
Infecções Gastrointestinais
Portugal
description Infections by Campylobacter jejuni and Campylobacter coli are considered the major cause of bacterial gastroenteritis in humans, with food being the main source of infection. In this study, a total of 196 Campylobacter strains (125 isolates from humans, 39 from retail food and 32 from food animal sources) isolated in Portugal between 2009 and 2012 were characterised by multilocus sequence typing (MLST) and flaA short variable region (SVR) typing. Susceptibility to six antibiotics as well as the mechanisms underlying antibiotic resistance phenotypes was also studied. Based on MLST typing, C. coli strains were genetically more conserved, with a predominant clonal complex (CC828), than C. jejuni strains. In contrast, C. coli isolates were genetically more variable than C. jejuni with regard to flaA-SVR typing. A high rate of resistance was observed for quinolones (100% to nalidixic acid, >90% to ciprofloxacin) and, in general, resistance was more common among C. coli, especially for erythromycin (40.2% vs. 6.7%). In addition, most isolates (86%) were resistant to multiple antimicrobial families. Besides the expected point mutations associated with antibiotic resistance, detected polymorphisms in the cmeABC locus likely play a role in the multiresistant phenotype. This study provides for the first time an overview of the genetic diversity of Campylobacter strains from Portugal. It also shows a worrying antibiotic multiresistance rate and the emergence of Campylobacter strains resistant to antibiotics of human use.
publishDate 2014
dc.date.none.fl_str_mv 2014-10
2014-10-01T00:00:00Z
2015-02-19T13:21:48Z
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/2919
url http://hdl.handle.net/10400.18/2919
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Int J Antimicrob Agents. 2014 Oct;44(4):306-13. doi: 10.1016/j.ijantimicag.2014.06.012. Epub 2014 Jul 26
0924-8579
10.1016/j.ijantimicag.2014.06.012
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dc.publisher.none.fl_str_mv Elsevier/ International Society of Chemotherapy
publisher.none.fl_str_mv Elsevier/ International Society of Chemotherapy
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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