Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal

Detalhes bibliográficos
Autor(a) principal: Duarte, I. M.
Data de Publicação: 2010
Outros Autores: Almeida, M. T. M., Brown, D. J. F., Marques, I., Neilson, R., Decraemer, Wilfrida
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/18363
Resumo: A survey of virus vector trichodorid nematodes was carried out in the central and northern regions of Portugal. Morphobio- metric identification showed the presence of trichodorid species previously reported from Portugal, except for Paratrichodorus porosus, which is reported for the first time in Continental Europe. Small subunit ribosomal DNA (SSU rDNA) sequences of ten different species occurring in Portugal were obtained and a phylogenetic analysis based on their alignment was performed to infer relationships among the different Portuguese trichodorid species and three non-indigenous populations (Nanidorus minor, P. allius and P. teres). The re- sulting phylogenetic tree is in agreement with the currently accepted classification for Trichodoridae, except for Nanidorus, which clusters together with Trichodorus species, while the genera Paratrichodorus and Trichodorus appear as two distinct groups. A better understanding of the generic groupings in the family Trichodoridae was found. Based on the new molecular analyses we herein accept Nanidorus as a valid genus.
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spelling Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal18S rDNAMolecularNanidorusParatrichodorusParatrichodorus porosusPhylogenyTobacco rattle virus (TRV)TrichodorusTylolaimophorus minorScience & TechnologyA survey of virus vector trichodorid nematodes was carried out in the central and northern regions of Portugal. Morphobio- metric identification showed the presence of trichodorid species previously reported from Portugal, except for Paratrichodorus porosus, which is reported for the first time in Continental Europe. Small subunit ribosomal DNA (SSU rDNA) sequences of ten different species occurring in Portugal were obtained and a phylogenetic analysis based on their alignment was performed to infer relationships among the different Portuguese trichodorid species and three non-indigenous populations (Nanidorus minor, P. allius and P. teres). The re- sulting phylogenetic tree is in agreement with the currently accepted classification for Trichodoridae, except for Nanidorus, which clusters together with Trichodorus species, while the genera Paratrichodorus and Trichodorus appear as two distinct groups. A better understanding of the generic groupings in the family Trichodoridae was found. Based on the new molecular analyses we herein accept Nanidorus as a valid genus.Brill Academic PublishersUniversidade do MinhoDuarte, I. M.Almeida, M. T. M.Brown, D. J. F.Marques, I.Neilson, R.Decraemer, Wilfrida20102010-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/18363eng1388-554510.1163/156854109X461721info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T11:55:25Zoai:repositorium.sdum.uminho.pt:1822/18363Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:44:58.748696Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
title Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
spellingShingle Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
Duarte, I. M.
18S rDNA
Molecular
Nanidorus
Paratrichodorus
Paratrichodorus porosus
Phylogeny
Tobacco rattle virus (TRV)
Trichodorus
Tylolaimophorus minor
Science & Technology
title_short Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
title_full Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
title_fullStr Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
title_full_unstemmed Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
title_sort Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family trichodoridae from Portugal
author Duarte, I. M.
author_facet Duarte, I. M.
Almeida, M. T. M.
Brown, D. J. F.
Marques, I.
Neilson, R.
Decraemer, Wilfrida
author_role author
author2 Almeida, M. T. M.
Brown, D. J. F.
Marques, I.
Neilson, R.
Decraemer, Wilfrida
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Duarte, I. M.
Almeida, M. T. M.
Brown, D. J. F.
Marques, I.
Neilson, R.
Decraemer, Wilfrida
dc.subject.por.fl_str_mv 18S rDNA
Molecular
Nanidorus
Paratrichodorus
Paratrichodorus porosus
Phylogeny
Tobacco rattle virus (TRV)
Trichodorus
Tylolaimophorus minor
Science & Technology
topic 18S rDNA
Molecular
Nanidorus
Paratrichodorus
Paratrichodorus porosus
Phylogeny
Tobacco rattle virus (TRV)
Trichodorus
Tylolaimophorus minor
Science & Technology
description A survey of virus vector trichodorid nematodes was carried out in the central and northern regions of Portugal. Morphobio- metric identification showed the presence of trichodorid species previously reported from Portugal, except for Paratrichodorus porosus, which is reported for the first time in Continental Europe. Small subunit ribosomal DNA (SSU rDNA) sequences of ten different species occurring in Portugal were obtained and a phylogenetic analysis based on their alignment was performed to infer relationships among the different Portuguese trichodorid species and three non-indigenous populations (Nanidorus minor, P. allius and P. teres). The re- sulting phylogenetic tree is in agreement with the currently accepted classification for Trichodoridae, except for Nanidorus, which clusters together with Trichodorus species, while the genera Paratrichodorus and Trichodorus appear as two distinct groups. A better understanding of the generic groupings in the family Trichodoridae was found. Based on the new molecular analyses we herein accept Nanidorus as a valid genus.
publishDate 2010
dc.date.none.fl_str_mv 2010
2010-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/18363
url http://hdl.handle.net/1822/18363
dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv 1388-5545
10.1163/156854109X461721
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dc.publisher.none.fl_str_mv Brill Academic Publishers
publisher.none.fl_str_mv Brill Academic Publishers
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