Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis

Detalhes bibliográficos
Autor(a) principal: Taware, Ravindra
Data de Publicação: 2017
Outros Autores: Taunk, Khushman, Pereira, Jorge A. M., Dhakne, Rahul, Kannan, Narayanan, Soneji, Dharmesh, Câmara, José S., Nagarajaram, H. A., Rapole, Srikanth
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.13/3878
Resumo: Introduction Head and neck cancer (HNC), like many other forms of cancer, is usually detected in advanced stages, causing poor survival outcomes. Lack of specific and sensi tive screening markers for early detection of HNC has wors ened the scenario for the patients as well as the clinicians. Therefore, identification of efficient, noninvasive and afford able screening marker/methodology with high specificity and sensitivity is imminent need of situation. Objectives This study aims to identify and characterize urinary volatomic alterations specific to HNC. Methods Volatomic analysis of urine samples collected from HNC patients (n=29) and healthy controls (n=31) was performed using headspace solid phase microextraction coupled to gas chromatography mass spectrometry (GC– MS). Both univariate and multivariate statistical approaches were used to investigate HNC specific volatomic alterations. Results Statistical analysis revealed a total of 28 metabo lites with highest contribution towards discrimination of HNC patients from healthy controls (VIP >1, p < 0.05, Log2 FC ≥0.58/≤−0.57). The discrimination efficiency and accuracy of urinary VOCs was ascertained by ROC curve analysis that allowed the identification of four metabolites viz. 2,6-dimethyl-7-octen-2-ol, 1-butanol, p-xylene and 4-methyl-2-heptanone with highest sensitivity and speci ficity to discriminate HNC patients from healthy controls. Further, the metabolic pathway analysis identified several dysregulated pathways in HNC patients and their detailed investigations could unravel novel mechanistic insights into the disease pathophysiology. Conclusion Overall, this study provides valuable finger print of the volatile profile of HNC patients, which in turn, might help in improving the current understanding of this form of cancer and lead to the development of non-invasive approaches for HNC diagnosis.
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spelling Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosisHead and neck cancerVolatomicsVOMsGC–MSUrinary markers.Faculdade de Ciências Exatas e da EngenhariaCentro de Química da MadeiraIntroduction Head and neck cancer (HNC), like many other forms of cancer, is usually detected in advanced stages, causing poor survival outcomes. Lack of specific and sensi tive screening markers for early detection of HNC has wors ened the scenario for the patients as well as the clinicians. Therefore, identification of efficient, noninvasive and afford able screening marker/methodology with high specificity and sensitivity is imminent need of situation. Objectives This study aims to identify and characterize urinary volatomic alterations specific to HNC. Methods Volatomic analysis of urine samples collected from HNC patients (n=29) and healthy controls (n=31) was performed using headspace solid phase microextraction coupled to gas chromatography mass spectrometry (GC– MS). Both univariate and multivariate statistical approaches were used to investigate HNC specific volatomic alterations. Results Statistical analysis revealed a total of 28 metabo lites with highest contribution towards discrimination of HNC patients from healthy controls (VIP >1, p < 0.05, Log2 FC ≥0.58/≤−0.57). The discrimination efficiency and accuracy of urinary VOCs was ascertained by ROC curve analysis that allowed the identification of four metabolites viz. 2,6-dimethyl-7-octen-2-ol, 1-butanol, p-xylene and 4-methyl-2-heptanone with highest sensitivity and speci ficity to discriminate HNC patients from healthy controls. Further, the metabolic pathway analysis identified several dysregulated pathways in HNC patients and their detailed investigations could unravel novel mechanistic insights into the disease pathophysiology. Conclusion Overall, this study provides valuable finger print of the volatile profile of HNC patients, which in turn, might help in improving the current understanding of this form of cancer and lead to the development of non-invasive approaches for HNC diagnosis.SpringerDigitUMaTaware, RavindraTaunk, KhushmanPereira, Jorge A. M.Dhakne, RahulKannan, NarayananSoneji, DharmeshCâmara, José S.Nagarajaram, H. A.Rapole, Srikanth2021-12-02T12:05:21Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.13/3878engTaware, R., Taunk, K., Pereira, J. A., Dhakne, R., Kannan, N., Soneji, D., ... & Rapole, S. (2017). Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis. Metabolomics, 13(10), 1-11. DOI 10.1007/s11306-017-1251-610.1007/s11306-017-1251-6info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-17T05:57:53Zoai:digituma.uma.pt:10400.13/3878Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:07:27.090350Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
title Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
spellingShingle Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
Taware, Ravindra
Head and neck cancer
Volatomics
VOMs
GC–MS
Urinary markers
.
Faculdade de Ciências Exatas e da Engenharia
Centro de Química da Madeira
title_short Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
title_full Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
title_fullStr Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
title_full_unstemmed Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
title_sort Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis
author Taware, Ravindra
author_facet Taware, Ravindra
Taunk, Khushman
Pereira, Jorge A. M.
Dhakne, Rahul
Kannan, Narayanan
Soneji, Dharmesh
Câmara, José S.
Nagarajaram, H. A.
Rapole, Srikanth
author_role author
author2 Taunk, Khushman
Pereira, Jorge A. M.
Dhakne, Rahul
Kannan, Narayanan
Soneji, Dharmesh
Câmara, José S.
Nagarajaram, H. A.
Rapole, Srikanth
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DigitUMa
dc.contributor.author.fl_str_mv Taware, Ravindra
Taunk, Khushman
Pereira, Jorge A. M.
Dhakne, Rahul
Kannan, Narayanan
Soneji, Dharmesh
Câmara, José S.
Nagarajaram, H. A.
Rapole, Srikanth
dc.subject.por.fl_str_mv Head and neck cancer
Volatomics
VOMs
GC–MS
Urinary markers
.
Faculdade de Ciências Exatas e da Engenharia
Centro de Química da Madeira
topic Head and neck cancer
Volatomics
VOMs
GC–MS
Urinary markers
.
Faculdade de Ciências Exatas e da Engenharia
Centro de Química da Madeira
description Introduction Head and neck cancer (HNC), like many other forms of cancer, is usually detected in advanced stages, causing poor survival outcomes. Lack of specific and sensi tive screening markers for early detection of HNC has wors ened the scenario for the patients as well as the clinicians. Therefore, identification of efficient, noninvasive and afford able screening marker/methodology with high specificity and sensitivity is imminent need of situation. Objectives This study aims to identify and characterize urinary volatomic alterations specific to HNC. Methods Volatomic analysis of urine samples collected from HNC patients (n=29) and healthy controls (n=31) was performed using headspace solid phase microextraction coupled to gas chromatography mass spectrometry (GC– MS). Both univariate and multivariate statistical approaches were used to investigate HNC specific volatomic alterations. Results Statistical analysis revealed a total of 28 metabo lites with highest contribution towards discrimination of HNC patients from healthy controls (VIP >1, p < 0.05, Log2 FC ≥0.58/≤−0.57). The discrimination efficiency and accuracy of urinary VOCs was ascertained by ROC curve analysis that allowed the identification of four metabolites viz. 2,6-dimethyl-7-octen-2-ol, 1-butanol, p-xylene and 4-methyl-2-heptanone with highest sensitivity and speci ficity to discriminate HNC patients from healthy controls. Further, the metabolic pathway analysis identified several dysregulated pathways in HNC patients and their detailed investigations could unravel novel mechanistic insights into the disease pathophysiology. Conclusion Overall, this study provides valuable finger print of the volatile profile of HNC patients, which in turn, might help in improving the current understanding of this form of cancer and lead to the development of non-invasive approaches for HNC diagnosis.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
2021-12-02T12:05:21Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.13/3878
url http://hdl.handle.net/10400.13/3878
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Taware, R., Taunk, K., Pereira, J. A., Dhakne, R., Kannan, N., Soneji, D., ... & Rapole, S. (2017). Investigation of urinary volatomic alterations in head and neck cancer: a non-invasive approach towards diagnosis and prognosis. Metabolomics, 13(10), 1-11. DOI 10.1007/s11306-017-1251-6
10.1007/s11306-017-1251-6
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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