Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Tipo de documento: | Dissertação |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | http://hdl.handle.net/10362/82974 |
Resumo: | The Zebrafish (Danio rerio) larva is an ideal model for identification of neuronal circuits such as those associated with visually guided behaviors like the optomotor and the optokinetic responses. The use of larvae expressing the calcium level indicator GCaMP in particular neuronal subpopulations allows monitoring of activity of these neurons and facilitates their anatomical and functional characterization. Our goal, in this context, is to characterize some of these subpopulations taking advantage of the expression of GFP using the Gal4-UAS system during the first 6 days of development. To examine and characterize the GFP expression in zebrafish larvae, we have applied an immunofluorescence protocol and recorded anatomical stacks using confocal imaging. This information gathered from several equivalent individuals and registered to a reference brain may then be used to establish anatomical atlases at these early stages of development that will complement those already developed for the 6 dpf larvae. Characterization of the transgenic lines at the early stages will help us to locate the functional clusters identified at 6 dpf with more anatomical accuracy and precision. We will present our work focusing on zebrafish lines, generated using a BAC transgenic approach, that expresses GFF or GFP from an insertion next to the olig2, chrna4 and pcp4a promoter regions. Two of these lines (olig2: GFP and chrna4: GFF) are shown to represent a similar pattern of expression has the original gene, whilst the pcp4a: GFF line does not, although its characterization is still of use to complement functional maps of neuron activity. In addition, we are using time lapse imaging with Lightsheet microscopy to follow the dynamics of neuronal differentiation and extension of projections during the 20-48 hours post fertilization period on an already characterized line(Chat:GFF). |
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Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in developmentZebrafisholig2chrna4pcp4a pitx2cchatConfocalDomínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e TecnologiasThe Zebrafish (Danio rerio) larva is an ideal model for identification of neuronal circuits such as those associated with visually guided behaviors like the optomotor and the optokinetic responses. The use of larvae expressing the calcium level indicator GCaMP in particular neuronal subpopulations allows monitoring of activity of these neurons and facilitates their anatomical and functional characterization. Our goal, in this context, is to characterize some of these subpopulations taking advantage of the expression of GFP using the Gal4-UAS system during the first 6 days of development. To examine and characterize the GFP expression in zebrafish larvae, we have applied an immunofluorescence protocol and recorded anatomical stacks using confocal imaging. This information gathered from several equivalent individuals and registered to a reference brain may then be used to establish anatomical atlases at these early stages of development that will complement those already developed for the 6 dpf larvae. Characterization of the transgenic lines at the early stages will help us to locate the functional clusters identified at 6 dpf with more anatomical accuracy and precision. We will present our work focusing on zebrafish lines, generated using a BAC transgenic approach, that expresses GFF or GFP from an insertion next to the olig2, chrna4 and pcp4a promoter regions. Two of these lines (olig2: GFP and chrna4: GFF) are shown to represent a similar pattern of expression has the original gene, whilst the pcp4a: GFF line does not, although its characterization is still of use to complement functional maps of neuron activity. In addition, we are using time lapse imaging with Lightsheet microscopy to follow the dynamics of neuronal differentiation and extension of projections during the 20-48 hours post fertilization period on an already characterized line(Chat:GFF).Corral, RuthRUNMartins, João Júlio2019-10-02T13:45:34Z2018-1120182018-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/82974enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:36:54Zoai:run.unl.pt:10362/82974Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:36:15.310624Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
title |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
spellingShingle |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development Martins, João Júlio Zebrafish olig2 chrna4 pcp4a pitx2c chat Confocal Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
title_short |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
title_full |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
title_fullStr |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
title_full_unstemmed |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
title_sort |
Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development |
author |
Martins, João Júlio |
author_facet |
Martins, João Júlio |
author_role |
author |
dc.contributor.none.fl_str_mv |
Corral, Ruth RUN |
dc.contributor.author.fl_str_mv |
Martins, João Júlio |
dc.subject.por.fl_str_mv |
Zebrafish olig2 chrna4 pcp4a pitx2c chat Confocal Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
topic |
Zebrafish olig2 chrna4 pcp4a pitx2c chat Confocal Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias |
description |
The Zebrafish (Danio rerio) larva is an ideal model for identification of neuronal circuits such as those associated with visually guided behaviors like the optomotor and the optokinetic responses. The use of larvae expressing the calcium level indicator GCaMP in particular neuronal subpopulations allows monitoring of activity of these neurons and facilitates their anatomical and functional characterization. Our goal, in this context, is to characterize some of these subpopulations taking advantage of the expression of GFP using the Gal4-UAS system during the first 6 days of development. To examine and characterize the GFP expression in zebrafish larvae, we have applied an immunofluorescence protocol and recorded anatomical stacks using confocal imaging. This information gathered from several equivalent individuals and registered to a reference brain may then be used to establish anatomical atlases at these early stages of development that will complement those already developed for the 6 dpf larvae. Characterization of the transgenic lines at the early stages will help us to locate the functional clusters identified at 6 dpf with more anatomical accuracy and precision. We will present our work focusing on zebrafish lines, generated using a BAC transgenic approach, that expresses GFF or GFP from an insertion next to the olig2, chrna4 and pcp4a promoter regions. Two of these lines (olig2: GFP and chrna4: GFF) are shown to represent a similar pattern of expression has the original gene, whilst the pcp4a: GFF line does not, although its characterization is still of use to complement functional maps of neuron activity. In addition, we are using time lapse imaging with Lightsheet microscopy to follow the dynamics of neuronal differentiation and extension of projections during the 20-48 hours post fertilization period on an already characterized line(Chat:GFF). |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-11 2018 2018-11-01T00:00:00Z 2019-10-02T13:45:34Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10362/82974 |
url |
http://hdl.handle.net/10362/82974 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
|
_version_ |
1799137981791993856 |