Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development

Detalhes bibliográficos
Autor(a) principal: Martins, João Júlio
Data de Publicação: 2018
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10362/82974
Resumo: The Zebrafish (Danio rerio) larva is an ideal model for identification of neuronal circuits such as those associated with visually guided behaviors like the optomotor and the optokinetic responses. The use of larvae expressing the calcium level indicator GCaMP in particular neuronal subpopulations allows monitoring of activity of these neurons and facilitates their anatomical and functional characterization. Our goal, in this context, is to characterize some of these subpopulations taking advantage of the expression of GFP using the Gal4-UAS system during the first 6 days of development. To examine and characterize the GFP expression in zebrafish larvae, we have applied an immunofluorescence protocol and recorded anatomical stacks using confocal imaging. This information gathered from several equivalent individuals and registered to a reference brain may then be used to establish anatomical atlases at these early stages of development that will complement those already developed for the 6 dpf larvae. Characterization of the transgenic lines at the early stages will help us to locate the functional clusters identified at 6 dpf with more anatomical accuracy and precision. We will present our work focusing on zebrafish lines, generated using a BAC transgenic approach, that expresses GFF or GFP from an insertion next to the olig2, chrna4 and pcp4a promoter regions. Two of these lines (olig2: GFP and chrna4: GFF) are shown to represent a similar pattern of expression has the original gene, whilst the pcp4a: GFF line does not, although its characterization is still of use to complement functional maps of neuron activity. In addition, we are using time lapse imaging with Lightsheet microscopy to follow the dynamics of neuronal differentiation and extension of projections during the 20-48 hours post fertilization period on an already characterized line(Chat:GFF).
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spelling Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in developmentZebrafisholig2chrna4pcp4a pitx2cchatConfocalDomínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e TecnologiasThe Zebrafish (Danio rerio) larva is an ideal model for identification of neuronal circuits such as those associated with visually guided behaviors like the optomotor and the optokinetic responses. The use of larvae expressing the calcium level indicator GCaMP in particular neuronal subpopulations allows monitoring of activity of these neurons and facilitates their anatomical and functional characterization. Our goal, in this context, is to characterize some of these subpopulations taking advantage of the expression of GFP using the Gal4-UAS system during the first 6 days of development. To examine and characterize the GFP expression in zebrafish larvae, we have applied an immunofluorescence protocol and recorded anatomical stacks using confocal imaging. This information gathered from several equivalent individuals and registered to a reference brain may then be used to establish anatomical atlases at these early stages of development that will complement those already developed for the 6 dpf larvae. Characterization of the transgenic lines at the early stages will help us to locate the functional clusters identified at 6 dpf with more anatomical accuracy and precision. We will present our work focusing on zebrafish lines, generated using a BAC transgenic approach, that expresses GFF or GFP from an insertion next to the olig2, chrna4 and pcp4a promoter regions. Two of these lines (olig2: GFP and chrna4: GFF) are shown to represent a similar pattern of expression has the original gene, whilst the pcp4a: GFF line does not, although its characterization is still of use to complement functional maps of neuron activity. In addition, we are using time lapse imaging with Lightsheet microscopy to follow the dynamics of neuronal differentiation and extension of projections during the 20-48 hours post fertilization period on an already characterized line(Chat:GFF).Corral, RuthRUNMartins, João Júlio2019-10-02T13:45:34Z2018-1120182018-11-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://hdl.handle.net/10362/82974enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:36:54Zoai:run.unl.pt:10362/82974Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:36:15.310624Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
title Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
spellingShingle Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
Martins, João Júlio
Zebrafish
olig2
chrna4
pcp4a pitx2c
chat
Confocal
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
title_short Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
title_full Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
title_fullStr Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
title_full_unstemmed Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
title_sort Ontogenesis of visual processing circuits in the zebrafish: analysis of specific neuronal subpopulations in development
author Martins, João Júlio
author_facet Martins, João Júlio
author_role author
dc.contributor.none.fl_str_mv Corral, Ruth
RUN
dc.contributor.author.fl_str_mv Martins, João Júlio
dc.subject.por.fl_str_mv Zebrafish
olig2
chrna4
pcp4a pitx2c
chat
Confocal
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
topic Zebrafish
olig2
chrna4
pcp4a pitx2c
chat
Confocal
Domínio/Área Científica::Engenharia e Tecnologia::Outras Engenharias e Tecnologias
description The Zebrafish (Danio rerio) larva is an ideal model for identification of neuronal circuits such as those associated with visually guided behaviors like the optomotor and the optokinetic responses. The use of larvae expressing the calcium level indicator GCaMP in particular neuronal subpopulations allows monitoring of activity of these neurons and facilitates their anatomical and functional characterization. Our goal, in this context, is to characterize some of these subpopulations taking advantage of the expression of GFP using the Gal4-UAS system during the first 6 days of development. To examine and characterize the GFP expression in zebrafish larvae, we have applied an immunofluorescence protocol and recorded anatomical stacks using confocal imaging. This information gathered from several equivalent individuals and registered to a reference brain may then be used to establish anatomical atlases at these early stages of development that will complement those already developed for the 6 dpf larvae. Characterization of the transgenic lines at the early stages will help us to locate the functional clusters identified at 6 dpf with more anatomical accuracy and precision. We will present our work focusing on zebrafish lines, generated using a BAC transgenic approach, that expresses GFF or GFP from an insertion next to the olig2, chrna4 and pcp4a promoter regions. Two of these lines (olig2: GFP and chrna4: GFF) are shown to represent a similar pattern of expression has the original gene, whilst the pcp4a: GFF line does not, although its characterization is still of use to complement functional maps of neuron activity. In addition, we are using time lapse imaging with Lightsheet microscopy to follow the dynamics of neuronal differentiation and extension of projections during the 20-48 hours post fertilization period on an already characterized line(Chat:GFF).
publishDate 2018
dc.date.none.fl_str_mv 2018-11
2018
2018-11-01T00:00:00Z
2019-10-02T13:45:34Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10362/82974
url http://hdl.handle.net/10362/82974
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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