Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley

Detalhes bibliográficos
Autor(a) principal: Leite,Jakson
Data de Publicação: 2009
Outros Autores: Seido,Sirando Lima, Passos,Samuel Ribeiro, Xavier,Gustavo Ribeiro, Rumjanek,Norma Gouvêa, Martins,Lindete Míria Vieira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Ciência do Solo (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832009000500015
Resumo: The biodiversity of rhizobium in soils of the São Francisco Valley is unknown and can be studied using cowpea as trap plants. The objective of this study was to verify the diversity of diazotrophic bacteria that nodulate cowpea in soils of the lower half of the São Francisco River Valley by morphological and genotypic characterization. Seven soil samples (A1, A2, A3, A4, C1, C2 and MC) were collected to capture bacteria associated to five cowpea cultivars (IPA 206, BRS Pujante, BRS Marataoã, Canapu Roxo, and Sempre Verde), in a 5x7 factorial design with three replications. Thirty days after plant emergence, the nodules were collected and the bacteria isolated and analyzed in relation to their growth characteristics in YMA medium. The 581 isolates were grouped in 49 morphologic groups. Of this total, 62.3 % formed colonies in up to three days, 33.4 % grew from the 6th day on, and 4.3 % began to grow 4 to 5 days after incubation. Regarding the formation of acids and alkalis, 63 % acidified the medium, 12 % made it alkaline and 25 % maintained the medium at neutral pH. The highest diversity was observed in the A3 sample and in isolates associated with the cultivars Canapu Roxo and BRS Pujante. Thirty-eight representative isolates were chosen for the genotypic characterization, clustered in four groups based on the restriction analysis of 16s rDNA. This grouping was strongly correlated with the sampling site; 13 rhizobium isolates had an electrophoretic profile distinct from the standard rhizobium strains used in this study.
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spelling Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River ValleyARDRAbiological nitrogen fixationVigna unguiculataThe biodiversity of rhizobium in soils of the São Francisco Valley is unknown and can be studied using cowpea as trap plants. The objective of this study was to verify the diversity of diazotrophic bacteria that nodulate cowpea in soils of the lower half of the São Francisco River Valley by morphological and genotypic characterization. Seven soil samples (A1, A2, A3, A4, C1, C2 and MC) were collected to capture bacteria associated to five cowpea cultivars (IPA 206, BRS Pujante, BRS Marataoã, Canapu Roxo, and Sempre Verde), in a 5x7 factorial design with three replications. Thirty days after plant emergence, the nodules were collected and the bacteria isolated and analyzed in relation to their growth characteristics in YMA medium. The 581 isolates were grouped in 49 morphologic groups. Of this total, 62.3 % formed colonies in up to three days, 33.4 % grew from the 6th day on, and 4.3 % began to grow 4 to 5 days after incubation. Regarding the formation of acids and alkalis, 63 % acidified the medium, 12 % made it alkaline and 25 % maintained the medium at neutral pH. The highest diversity was observed in the A3 sample and in isolates associated with the cultivars Canapu Roxo and BRS Pujante. Thirty-eight representative isolates were chosen for the genotypic characterization, clustered in four groups based on the restriction analysis of 16s rDNA. This grouping was strongly correlated with the sampling site; 13 rhizobium isolates had an electrophoretic profile distinct from the standard rhizobium strains used in this study.Sociedade Brasileira de Ciência do Solo2009-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832009000500015Revista Brasileira de Ciência do Solo v.33 n.5 2009reponame:Revista Brasileira de Ciência do Solo (Online)instname:Sociedade Brasileira de Ciência do Solo (SBCS)instacron:SBCS10.1590/S0100-06832009000500015info:eu-repo/semantics/openAccessLeite,JaksonSeido,Sirando LimaPassos,Samuel RibeiroXavier,Gustavo RibeiroRumjanek,Norma GouvêaMartins,Lindete Míria Vieiraeng2010-01-05T00:00:00Zoai:scielo:S0100-06832009000500015Revistahttp://www.scielo.br/scielo.php?script=sci_serial&pid=0100-0683&lng=es&nrm=isohttps://old.scielo.br/oai/scielo-oai.php||sbcs@ufv.br1806-96570100-0683opendoar:2010-01-05T00:00Revista Brasileira de Ciência do Solo (Online) - Sociedade Brasileira de Ciência do Solo (SBCS)false
dc.title.none.fl_str_mv Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
title Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
spellingShingle Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
Leite,Jakson
ARDRA
biological nitrogen fixation
Vigna unguiculata
title_short Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
title_full Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
title_fullStr Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
title_full_unstemmed Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
title_sort Biodiversity of rhizobia associated with cowpea cultivars in soils of the lower half of the São Francisco River Valley
author Leite,Jakson
author_facet Leite,Jakson
Seido,Sirando Lima
Passos,Samuel Ribeiro
Xavier,Gustavo Ribeiro
Rumjanek,Norma Gouvêa
Martins,Lindete Míria Vieira
author_role author
author2 Seido,Sirando Lima
Passos,Samuel Ribeiro
Xavier,Gustavo Ribeiro
Rumjanek,Norma Gouvêa
Martins,Lindete Míria Vieira
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Leite,Jakson
Seido,Sirando Lima
Passos,Samuel Ribeiro
Xavier,Gustavo Ribeiro
Rumjanek,Norma Gouvêa
Martins,Lindete Míria Vieira
dc.subject.por.fl_str_mv ARDRA
biological nitrogen fixation
Vigna unguiculata
topic ARDRA
biological nitrogen fixation
Vigna unguiculata
description The biodiversity of rhizobium in soils of the São Francisco Valley is unknown and can be studied using cowpea as trap plants. The objective of this study was to verify the diversity of diazotrophic bacteria that nodulate cowpea in soils of the lower half of the São Francisco River Valley by morphological and genotypic characterization. Seven soil samples (A1, A2, A3, A4, C1, C2 and MC) were collected to capture bacteria associated to five cowpea cultivars (IPA 206, BRS Pujante, BRS Marataoã, Canapu Roxo, and Sempre Verde), in a 5x7 factorial design with three replications. Thirty days after plant emergence, the nodules were collected and the bacteria isolated and analyzed in relation to their growth characteristics in YMA medium. The 581 isolates were grouped in 49 morphologic groups. Of this total, 62.3 % formed colonies in up to three days, 33.4 % grew from the 6th day on, and 4.3 % began to grow 4 to 5 days after incubation. Regarding the formation of acids and alkalis, 63 % acidified the medium, 12 % made it alkaline and 25 % maintained the medium at neutral pH. The highest diversity was observed in the A3 sample and in isolates associated with the cultivars Canapu Roxo and BRS Pujante. Thirty-eight representative isolates were chosen for the genotypic characterization, clustered in four groups based on the restriction analysis of 16s rDNA. This grouping was strongly correlated with the sampling site; 13 rhizobium isolates had an electrophoretic profile distinct from the standard rhizobium strains used in this study.
publishDate 2009
dc.date.none.fl_str_mv 2009-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832009000500015
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0100-06832009000500015
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Ciência do Solo
publisher.none.fl_str_mv Sociedade Brasileira de Ciência do Solo
dc.source.none.fl_str_mv Revista Brasileira de Ciência do Solo v.33 n.5 2009
reponame:Revista Brasileira de Ciência do Solo (Online)
instname:Sociedade Brasileira de Ciência do Solo (SBCS)
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instname_str Sociedade Brasileira de Ciência do Solo (SBCS)
instacron_str SBCS
institution SBCS
reponame_str Revista Brasileira de Ciência do Solo (Online)
collection Revista Brasileira de Ciência do Solo (Online)
repository.name.fl_str_mv Revista Brasileira de Ciência do Solo (Online) - Sociedade Brasileira de Ciência do Solo (SBCS)
repository.mail.fl_str_mv ||sbcs@ufv.br
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