Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil

Detalhes bibliográficos
Autor(a) principal: Mendes,Wanderson de Sousa
Data de Publicação: 2021
Outros Autores: Boechat,Cácio Luiz, Gualberto,Adriano Venicius Santana, Barbosa,Ronny Sobreira, Silva,Yuri Jacques Agra Bezerra da, Saraiva,Paloma Cunha, Sena,Antonny Francisco Sampaio de, Duarte,Lizandra de Sousa Luz
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Ciência do Solo (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832021000100503
Resumo: ABSTRACT Soil chemical and physical analyses are the major sources of data for agriculture. However, traditional soil analyses are time-consuming, not cost-efficient, and not environmentally friendly. An alternative to traditional soil analyses is soil spectroscopy. This technique is a low-cost and quick analytical method, which can be implemented in a laboratory and/or in-situ. Nevertheless, some spectrometers are expensive and do not contemplate the entire spectrum. Despite this limitation, the main objective of the study was to create a soil spectral library of the Piauí State using only the 1000–2500 nm range. In this sense, it was evaluated and standardized the soil spectral library by accessing the combination of smoothing, standard normal variate, continuum removal, and Savitzky-Golay derivative spectral preprocessing procedures with partial least squares, random forest, and cubist machine learning algorithms. It was collected 262 geo-referenced soil samples at the layer of 0.00–0.20 m across the entire Piauí State, representing most of its soil variability. The soil properties evaluated were pH(H2O), sand, clay, and soil organic carbon (SOC) contents. This study demonstrated that the Standard Normal Variate was one of the most promising preprocessing procedures to improve model predictions for pH(H2O), sand, and clay. For SOC and pH, the best overall results were without preprocessing the soil spectra. Moreover, the cubist model was the most accurate in predicting soil properties. Finally, our study showed evidence of the potential and feasibility of using this soil spectral library to estimate soil properties such as pH(H2O), sand, clay, and SOC.
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spelling Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazilsoil spectroscopysoil predictionsshortwave infraredNIRABSTRACT Soil chemical and physical analyses are the major sources of data for agriculture. However, traditional soil analyses are time-consuming, not cost-efficient, and not environmentally friendly. An alternative to traditional soil analyses is soil spectroscopy. This technique is a low-cost and quick analytical method, which can be implemented in a laboratory and/or in-situ. Nevertheless, some spectrometers are expensive and do not contemplate the entire spectrum. Despite this limitation, the main objective of the study was to create a soil spectral library of the Piauí State using only the 1000–2500 nm range. In this sense, it was evaluated and standardized the soil spectral library by accessing the combination of smoothing, standard normal variate, continuum removal, and Savitzky-Golay derivative spectral preprocessing procedures with partial least squares, random forest, and cubist machine learning algorithms. It was collected 262 geo-referenced soil samples at the layer of 0.00–0.20 m across the entire Piauí State, representing most of its soil variability. The soil properties evaluated were pH(H2O), sand, clay, and soil organic carbon (SOC) contents. This study demonstrated that the Standard Normal Variate was one of the most promising preprocessing procedures to improve model predictions for pH(H2O), sand, and clay. For SOC and pH, the best overall results were without preprocessing the soil spectra. Moreover, the cubist model was the most accurate in predicting soil properties. Finally, our study showed evidence of the potential and feasibility of using this soil spectral library to estimate soil properties such as pH(H2O), sand, clay, and SOC.Sociedade Brasileira de Ciência do Solo2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832021000100503Revista Brasileira de Ciência do Solo v.45 2021reponame:Revista Brasileira de Ciência do Solo (Online)instname:Sociedade Brasileira de Ciência do Solo (SBCS)instacron:SBCS10.36783/18069657rbcs20200115info:eu-repo/semantics/openAccessMendes,Wanderson de SousaBoechat,Cácio LuizGualberto,Adriano Venicius SantanaBarbosa,Ronny SobreiraSilva,Yuri Jacques Agra Bezerra daSaraiva,Paloma CunhaSena,Antonny Francisco Sampaio deDuarte,Lizandra de Sousa Luzeng2021-03-12T00:00:00Zoai:scielo:S0100-06832021000100503Revistahttp://www.scielo.br/scielo.php?script=sci_serial&pid=0100-0683&lng=es&nrm=isohttps://old.scielo.br/oai/scielo-oai.php||sbcs@ufv.br1806-96570100-0683opendoar:2021-03-12T00:00Revista Brasileira de Ciência do Solo (Online) - Sociedade Brasileira de Ciência do Solo (SBCS)false
dc.title.none.fl_str_mv Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
title Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
spellingShingle Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
Mendes,Wanderson de Sousa
soil spectroscopy
soil predictions
shortwave infrared
NIR
title_short Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
title_full Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
title_fullStr Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
title_full_unstemmed Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
title_sort Soil spectral library of Piauí State using machine learning for laboratory analysis in Northeastern Brazil
author Mendes,Wanderson de Sousa
author_facet Mendes,Wanderson de Sousa
Boechat,Cácio Luiz
Gualberto,Adriano Venicius Santana
Barbosa,Ronny Sobreira
Silva,Yuri Jacques Agra Bezerra da
Saraiva,Paloma Cunha
Sena,Antonny Francisco Sampaio de
Duarte,Lizandra de Sousa Luz
author_role author
author2 Boechat,Cácio Luiz
Gualberto,Adriano Venicius Santana
Barbosa,Ronny Sobreira
Silva,Yuri Jacques Agra Bezerra da
Saraiva,Paloma Cunha
Sena,Antonny Francisco Sampaio de
Duarte,Lizandra de Sousa Luz
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Mendes,Wanderson de Sousa
Boechat,Cácio Luiz
Gualberto,Adriano Venicius Santana
Barbosa,Ronny Sobreira
Silva,Yuri Jacques Agra Bezerra da
Saraiva,Paloma Cunha
Sena,Antonny Francisco Sampaio de
Duarte,Lizandra de Sousa Luz
dc.subject.por.fl_str_mv soil spectroscopy
soil predictions
shortwave infrared
NIR
topic soil spectroscopy
soil predictions
shortwave infrared
NIR
description ABSTRACT Soil chemical and physical analyses are the major sources of data for agriculture. However, traditional soil analyses are time-consuming, not cost-efficient, and not environmentally friendly. An alternative to traditional soil analyses is soil spectroscopy. This technique is a low-cost and quick analytical method, which can be implemented in a laboratory and/or in-situ. Nevertheless, some spectrometers are expensive and do not contemplate the entire spectrum. Despite this limitation, the main objective of the study was to create a soil spectral library of the Piauí State using only the 1000–2500 nm range. In this sense, it was evaluated and standardized the soil spectral library by accessing the combination of smoothing, standard normal variate, continuum removal, and Savitzky-Golay derivative spectral preprocessing procedures with partial least squares, random forest, and cubist machine learning algorithms. It was collected 262 geo-referenced soil samples at the layer of 0.00–0.20 m across the entire Piauí State, representing most of its soil variability. The soil properties evaluated were pH(H2O), sand, clay, and soil organic carbon (SOC) contents. This study demonstrated that the Standard Normal Variate was one of the most promising preprocessing procedures to improve model predictions for pH(H2O), sand, and clay. For SOC and pH, the best overall results were without preprocessing the soil spectra. Moreover, the cubist model was the most accurate in predicting soil properties. Finally, our study showed evidence of the potential and feasibility of using this soil spectral library to estimate soil properties such as pH(H2O), sand, clay, and SOC.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-06832021000100503
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.36783/18069657rbcs20200115
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Ciência do Solo
publisher.none.fl_str_mv Sociedade Brasileira de Ciência do Solo
dc.source.none.fl_str_mv Revista Brasileira de Ciência do Solo v.45 2021
reponame:Revista Brasileira de Ciência do Solo (Online)
instname:Sociedade Brasileira de Ciência do Solo (SBCS)
instacron:SBCS
instname_str Sociedade Brasileira de Ciência do Solo (SBCS)
instacron_str SBCS
institution SBCS
reponame_str Revista Brasileira de Ciência do Solo (Online)
collection Revista Brasileira de Ciência do Solo (Online)
repository.name.fl_str_mv Revista Brasileira de Ciência do Solo (Online) - Sociedade Brasileira de Ciência do Solo (SBCS)
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