Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers

Detalhes bibliográficos
Autor(a) principal: Barbosa,Josefa T. V.
Data de Publicação: 2019
Outros Autores: Barbosa,Marcílio S., Morais,Suzyane, Santana,Antônio E. G., Almeida,Cicero
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500801
Resumo: Abstract The ants of the genus Atta are considered important pests to agriculture in the Americas, although Atta species are also important contributors to ecosystem functions in the various habitats in which they occur. The aim of this study was to assemble four complete mitochondrial genomes of the genus Atta, construct the phylogenomic tree, and analyze the gene content, order, and organization. The mitogenomes of A. colombica, A. opaciceps, A. texana, and A. sexdens rubropilosa comprise 18,392, 19,257, 19,709, and 19,748 bp, respectively. The four Atta mitogenomes showed the charactistics typical of those of insects, with 13 protein-coding genes, 22 tRNAs, and 2 rRNAs, with genes displayed in the conventional order. Analysis for intergenic spacer regions showed that Atta intergenic spacers are larger than those of the outgroups. Phylogenomic analyses using partial cytochrome oxidase I gene sequences showed similar topologies to previous phylogenetic analyses, with high clade support values. We conclude that Atta mitogenomes are characterized by high conservation in gene order and have giant intergenic spacers in the genus Atta.
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spelling Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacersAntsevolutionmitogenomesAbstract The ants of the genus Atta are considered important pests to agriculture in the Americas, although Atta species are also important contributors to ecosystem functions in the various habitats in which they occur. The aim of this study was to assemble four complete mitochondrial genomes of the genus Atta, construct the phylogenomic tree, and analyze the gene content, order, and organization. The mitogenomes of A. colombica, A. opaciceps, A. texana, and A. sexdens rubropilosa comprise 18,392, 19,257, 19,709, and 19,748 bp, respectively. The four Atta mitogenomes showed the charactistics typical of those of insects, with 13 protein-coding genes, 22 tRNAs, and 2 rRNAs, with genes displayed in the conventional order. Analysis for intergenic spacer regions showed that Atta intergenic spacers are larger than those of the outgroups. Phylogenomic analyses using partial cytochrome oxidase I gene sequences showed similar topologies to previous phylogenetic analyses, with high clade support values. We conclude that Atta mitogenomes are characterized by high conservation in gene order and have giant intergenic spacers in the genus Atta.Sociedade Brasileira de Genética2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500801Genetics and Molecular Biology v.42 n.4 2019reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2018-0055info:eu-repo/semantics/openAccessBarbosa,Josefa T. V.Barbosa,Marcílio S.Morais,SuzyaneSantana,Antônio E. G.Almeida,Ciceroeng2020-01-31T00:00:00Zoai:scielo:S1415-47572019000500801Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2020-01-31T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
title Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
spellingShingle Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
Barbosa,Josefa T. V.
Ants
evolution
mitogenomes
title_short Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
title_full Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
title_fullStr Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
title_full_unstemmed Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
title_sort Mitochondrial genomes of genus Atta (Formicidae: Myrmicinae) reveal high gene organization and giant intergenic spacers
author Barbosa,Josefa T. V.
author_facet Barbosa,Josefa T. V.
Barbosa,Marcílio S.
Morais,Suzyane
Santana,Antônio E. G.
Almeida,Cicero
author_role author
author2 Barbosa,Marcílio S.
Morais,Suzyane
Santana,Antônio E. G.
Almeida,Cicero
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Barbosa,Josefa T. V.
Barbosa,Marcílio S.
Morais,Suzyane
Santana,Antônio E. G.
Almeida,Cicero
dc.subject.por.fl_str_mv Ants
evolution
mitogenomes
topic Ants
evolution
mitogenomes
description Abstract The ants of the genus Atta are considered important pests to agriculture in the Americas, although Atta species are also important contributors to ecosystem functions in the various habitats in which they occur. The aim of this study was to assemble four complete mitochondrial genomes of the genus Atta, construct the phylogenomic tree, and analyze the gene content, order, and organization. The mitogenomes of A. colombica, A. opaciceps, A. texana, and A. sexdens rubropilosa comprise 18,392, 19,257, 19,709, and 19,748 bp, respectively. The four Atta mitogenomes showed the charactistics typical of those of insects, with 13 protein-coding genes, 22 tRNAs, and 2 rRNAs, with genes displayed in the conventional order. Analysis for intergenic spacer regions showed that Atta intergenic spacers are larger than those of the outgroups. Phylogenomic analyses using partial cytochrome oxidase I gene sequences showed similar topologies to previous phylogenetic analyses, with high clade support values. We conclude that Atta mitogenomes are characterized by high conservation in gene order and have giant intergenic spacers in the genus Atta.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500801
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500801
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2018-0055
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.42 n.4 2019
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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instname_str Sociedade Brasileira de Genética (SBG)
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reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
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