Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains

Detalhes bibliográficos
Autor(a) principal: Varani,Alessandro M.
Data de Publicação: 2012
Outros Autores: Monteiro-Vitorello,Claudia B., Almeida,Luiz G.P. de, Souza,Rangel C., Cunha,Oberdan L., Lima,Wanessa C., Civerolo,Edwin, Sluys,Marie-Anne Van, Vasconcelos,Ana T.R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000100021
Resumo: The Xylella fastidiosa comparative genomic database is a scientific resource with the aim to provide a user-friendly interface for accessing high-quality manually curated genomic annotation and comparative sequence analysis, as well as for identifying and mapping prophage-like elements, a marked feature of Xylella genomes. Here we describe a database and tools for exploring the biology of this important plant pathogen. The hallmarks of this database are the high quality genomic annotation, the functional and comparative genomic analysis and the identification and mapping of prophage-like elements. It is available from web site http://www.xylella.lncc.br.
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spelling Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strainsgenome annotation and assemblycomparative genomicsmobile genetic elementsThe Xylella fastidiosa comparative genomic database is a scientific resource with the aim to provide a user-friendly interface for accessing high-quality manually curated genomic annotation and comparative sequence analysis, as well as for identifying and mapping prophage-like elements, a marked feature of Xylella genomes. Here we describe a database and tools for exploring the biology of this important plant pathogen. The hallmarks of this database are the high quality genomic annotation, the functional and comparative genomic analysis and the identification and mapping of prophage-like elements. It is available from web site http://www.xylella.lncc.br.Sociedade Brasileira de Genética2012-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000100021Genetics and Molecular Biology v.35 n.1 2012reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572012005000019info:eu-repo/semantics/openAccessVarani,Alessandro M.Monteiro-Vitorello,Claudia B.Almeida,Luiz G.P. deSouza,Rangel C.Cunha,Oberdan L.Lima,Wanessa C.Civerolo,EdwinSluys,Marie-Anne VanVasconcelos,Ana T.R.eng2012-03-28T00:00:00Zoai:scielo:S1415-47572012000100021Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2012-03-28T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
title Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
spellingShingle Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
Varani,Alessandro M.
genome annotation and assembly
comparative genomics
mobile genetic elements
title_short Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
title_full Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
title_fullStr Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
title_full_unstemmed Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
title_sort Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains
author Varani,Alessandro M.
author_facet Varani,Alessandro M.
Monteiro-Vitorello,Claudia B.
Almeida,Luiz G.P. de
Souza,Rangel C.
Cunha,Oberdan L.
Lima,Wanessa C.
Civerolo,Edwin
Sluys,Marie-Anne Van
Vasconcelos,Ana T.R.
author_role author
author2 Monteiro-Vitorello,Claudia B.
Almeida,Luiz G.P. de
Souza,Rangel C.
Cunha,Oberdan L.
Lima,Wanessa C.
Civerolo,Edwin
Sluys,Marie-Anne Van
Vasconcelos,Ana T.R.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Varani,Alessandro M.
Monteiro-Vitorello,Claudia B.
Almeida,Luiz G.P. de
Souza,Rangel C.
Cunha,Oberdan L.
Lima,Wanessa C.
Civerolo,Edwin
Sluys,Marie-Anne Van
Vasconcelos,Ana T.R.
dc.subject.por.fl_str_mv genome annotation and assembly
comparative genomics
mobile genetic elements
topic genome annotation and assembly
comparative genomics
mobile genetic elements
description The Xylella fastidiosa comparative genomic database is a scientific resource with the aim to provide a user-friendly interface for accessing high-quality manually curated genomic annotation and comparative sequence analysis, as well as for identifying and mapping prophage-like elements, a marked feature of Xylella genomes. Here we describe a database and tools for exploring the biology of this important plant pathogen. The hallmarks of this database are the high quality genomic annotation, the functional and comparative genomic analysis and the identification and mapping of prophage-like elements. It is available from web site http://www.xylella.lncc.br.
publishDate 2012
dc.date.none.fl_str_mv 2012-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000100021
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572012000100021
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572012005000019
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.35 n.1 2012
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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