Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata
Autor(a) principal: | |
---|---|
Data de Publicação: | 2021 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000100403 |
Resumo: | Abstract Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation. |
id |
SBG-1_51093a2381e32dc02b0267984f6398a7 |
---|---|
oai_identifier_str |
oai:scielo:S1415-47572021000100403 |
network_acronym_str |
SBG-1 |
network_name_str |
Genetics and Molecular Biology |
repository_id_str |
|
spelling |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylataEndophyteLeclerciagenomeplant growth promotionstrainsAbstract Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation.Sociedade Brasileira de Genética2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000100403Genetics and Molecular Biology v.44 n.1 2021reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2020-0130info:eu-repo/semantics/openAccessSnak,AlineVendruscolo,Eliane Cristina GruszkaSantos,Marise Fonseca dosFiorini,AdrianaMesa,Danyeng2021-01-22T00:00:00Zoai:scielo:S1415-47572021000100403Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2021-01-22T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
title |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
spellingShingle |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata Snak,Aline Endophyte Leclercia genome plant growth promotion strains |
title_short |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
title_full |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
title_fullStr |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
title_full_unstemmed |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
title_sort |
Genome sequencing and analysis of plant growth-promoting attributes from Leclercia adecarboxylata |
author |
Snak,Aline |
author_facet |
Snak,Aline Vendruscolo,Eliane Cristina Gruszka Santos,Marise Fonseca dos Fiorini,Adriana Mesa,Dany |
author_role |
author |
author2 |
Vendruscolo,Eliane Cristina Gruszka Santos,Marise Fonseca dos Fiorini,Adriana Mesa,Dany |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Snak,Aline Vendruscolo,Eliane Cristina Gruszka Santos,Marise Fonseca dos Fiorini,Adriana Mesa,Dany |
dc.subject.por.fl_str_mv |
Endophyte Leclercia genome plant growth promotion strains |
topic |
Endophyte Leclercia genome plant growth promotion strains |
description |
Abstract Plant growth-promoting bacteria are ecological alternatives for fertilization, mainly for gramineous. Since plant x bacteria interaction is genotype and strain dependent, searching for new strains may contribute to the development of new biofertilizers. We aim to characterize plant growth-promoting capacity of Leclercia adecarboxylata strain Palotina, formerly isolated by our group in corn. A single isolated colony was taken and its genome was sequenced using Illumina technology. The whole genome was compared to other Leclercia adecarboxylata strains, and their biological and growth-promoting traits, such as P solubilization and auxin production, were tested. Following that, a 4.8 Mb genome of L. adecarboxylata strain Palotina was assembled and the functional annotation was carried out. This paper is the first to report the genes associated with plant growth promotion demonstrating in vitro indole acid production by this strain. These results project the endophyte as a potential biofertilizer for further commercial exploitation. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000100403 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000100403 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4685-gmb-2020-0130 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.44 n.1 2021 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
_version_ |
1752122390196781056 |