Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed

Detalhes bibliográficos
Autor(a) principal: Cothran,E. Gus
Data de Publicação: 2005
Outros Autores: Juras,Rytis, Macijauskiene,Vale
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006
Resumo: Genetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared to the reference sequence were found in Lithuanian horse breeds. Genetic cluster analysis did not shown any clear pattern of relationship among breeds of different type.
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spelling Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breedD-loopEquus caballusphylogenypolymorphismGenetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared to the reference sequence were found in Lithuanian horse breeds. Genetic cluster analysis did not shown any clear pattern of relationship among breeds of different type.Sociedade Brasileira de Genética2005-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006Genetics and Molecular Biology v.28 n.4 2005reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572005000500006info:eu-repo/semantics/openAccessCothran,E. GusJuras,RytisMacijauskiene,Valeeng2006-02-03T00:00:00Zoai:scielo:S1415-47572005000500006Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-02-03T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
title Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
spellingShingle Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
Cothran,E. Gus
D-loop
Equus caballus
phylogeny
polymorphism
title_short Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
title_full Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
title_fullStr Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
title_full_unstemmed Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
title_sort Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
author Cothran,E. Gus
author_facet Cothran,E. Gus
Juras,Rytis
Macijauskiene,Vale
author_role author
author2 Juras,Rytis
Macijauskiene,Vale
author2_role author
author
dc.contributor.author.fl_str_mv Cothran,E. Gus
Juras,Rytis
Macijauskiene,Vale
dc.subject.por.fl_str_mv D-loop
Equus caballus
phylogeny
polymorphism
topic D-loop
Equus caballus
phylogeny
polymorphism
description Genetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared to the reference sequence were found in Lithuanian horse breeds. Genetic cluster analysis did not shown any clear pattern of relationship among breeds of different type.
publishDate 2005
dc.date.none.fl_str_mv 2005-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572005000500006
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.28 n.4 2005
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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