Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed
Autor(a) principal: | |
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Data de Publicação: | 2005 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006 |
Resumo: | Genetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared to the reference sequence were found in Lithuanian horse breeds. Genetic cluster analysis did not shown any clear pattern of relationship among breeds of different type. |
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Genetics and Molecular Biology |
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Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breedD-loopEquus caballusphylogenypolymorphismGenetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared to the reference sequence were found in Lithuanian horse breeds. Genetic cluster analysis did not shown any clear pattern of relationship among breeds of different type.Sociedade Brasileira de Genética2005-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006Genetics and Molecular Biology v.28 n.4 2005reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572005000500006info:eu-repo/semantics/openAccessCothran,E. GusJuras,RytisMacijauskiene,Valeeng2006-02-03T00:00:00Zoai:scielo:S1415-47572005000500006Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-02-03T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
title |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
spellingShingle |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed Cothran,E. Gus D-loop Equus caballus phylogeny polymorphism |
title_short |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
title_full |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
title_fullStr |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
title_full_unstemmed |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
title_sort |
Mitochondrial DNA D-loop sequence variation among 5 maternal lines of the Zemaitukai horse breed |
author |
Cothran,E. Gus |
author_facet |
Cothran,E. Gus Juras,Rytis Macijauskiene,Vale |
author_role |
author |
author2 |
Juras,Rytis Macijauskiene,Vale |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Cothran,E. Gus Juras,Rytis Macijauskiene,Vale |
dc.subject.por.fl_str_mv |
D-loop Equus caballus phylogeny polymorphism |
topic |
D-loop Equus caballus phylogeny polymorphism |
description |
Genetic variation in Zemaitukai horses was investigated using mitochondrial DNA (mtDNA) sequencing. The study was performed on 421 bp of the mitochondrial DNA control region, which is known to be more variable than other sections of the mitochondrial genome. Samples from each of the remaining maternal family lines of Zemaitukai horses and three random samples for other Lithuanian (Lithuanian Heavy Draught, Zemaitukai large type) and ten European horse breeds were sequenced. Five distinct haplotypes were obtained for the five Zemaitukai maternal families supporting the pedigree data. The minimal difference between two different sequence haplotypes was 6 and the maximal 11 nucleotides in Zemaitukai horse breed. A total of 20 nucleotide differences compared to the reference sequence were found in Lithuanian horse breeds. Genetic cluster analysis did not shown any clear pattern of relationship among breeds of different type. |
publishDate |
2005 |
dc.date.none.fl_str_mv |
2005-12-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000500006 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1415-47572005000500006 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.28 n.4 2005 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
_version_ |
1752122379805392896 |